RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 ENOSF1Q7L5Y1 443 aa12.55□□□□□ -0.4
DDX54-206ENST00000549271 OR14C36Q8NHC7 312 aa12.55□□□□□ -0.4
DDX54-206ENST00000549271 DQX1Q8TE96 717 aaKnown RBP12.55□□□□□ -0.4
DDX54-206ENST00000549271 CLEC4CQ8WTT0 213 aa12.55□□□□□ -0.4
DDX54-206ENST00000549271 FAM131CQ96AQ9 280 aa12.55□□□□□ -0.4
DDX54-206ENST00000549271 GRAMD1AQ96CP6 724 aa12.55□□□□□ -0.4
DDX54-206ENST00000549271 TRIM62Q9BVG3 475 aa12.55□□□□□ -0.4
DDX54-206ENST00000549271 ACP6Q9NPH0 428 aa12.55□□□□□ -0.4
DDX54-206ENST00000549271 SAMSN1Q9NSI8 373 aaKnown RBP12.55□□□□□ -0.4
DDX54-206ENST00000549271 AJAP1Q9UKB5 411 aaPredicted RBP12.55□□□□□ -0.4
DDX54-206ENST00000549271 ATXN7L1Q9ULK2 861 aaPredicted RBP12.55□□□□□ -0.4
DDX54-206ENST00000549271 DMTF1Q9Y222 760 aa12.55□□□□□ -0.4
DDX54-206ENST00000549271 ITIH6Q6UXX5 1313 aa12.55□□□□□ -0.4
DDX54-206ENST00000549271 CREBBPQ92793 2442 aa12.54□□□□□ -0.4
DDX54-206ENST00000549271 RP1P56715 2156 aa12.54□□□□□ -0.4
DDX54-206ENST00000549271 PMS2P1A4D2B8 440 aa12.54□□□□□ -0.4
DDX54-206ENST00000549271 PIK3R2O00459 728 aa12.54□□□□□ -0.4
DDX54-206ENST00000549271 NUDT1P36639 197 aa12.54□□□□□ -0.4
DDX54-206ENST00000549271 MLLT3P42568 568 aaPredicted RBP12.54□□□□□ -0.4
DDX54-206ENST00000549271 ACADSBP45954 432 aa12.54□□□□□ -0.4
DDX54-206ENST00000549271 RPS24P62847 133 aaKnown RBP12.54□□□□□ -0.4
DDX54-206ENST00000549271 ARHGAP44Q17R89 818 aa12.54□□□□□ -0.4
DDX54-206ENST00000549271 VWA3BQ502W6 1294 aa12.54□□□□□ -0.4
DDX54-206ENST00000549271 DENND1BQ6P3S1 775 aa12.54□□□□□ -0.4
DDX54-206ENST00000549271 PRPF39Q86UA1 669 aaKnown RBP12.54□□□□□ -0.4
DDX54-206ENST00000549271 FAM114A1Q8IWE2 563 aa12.54□□□□□ -0.4
DDX54-206ENST00000549271 ZNF606Q8WXB4 792 aa12.54□□□□□ -0.4
DDX54-206ENST00000549271 SHC3Q92529 594 aa12.54□□□□□ -0.4
DDX54-206ENST00000549271 EXTL1Q92935 676 aa12.54□□□□□ -0.4
DDX54-206ENST00000549271 MYEOVQ96EZ4 313 aa12.54□□□□□ -0.4
DDX54-206ENST00000549271 ATXN7L3BQ96GX2 97 aa12.54□□□□□ -0.4
DDX54-206ENST00000549271 APOLD1Q96LR9 279 aa12.54□□□□□ -0.4
DDX54-206ENST00000549271 FAM129BQ96TA1 746 aa12.54□□□□□ -0.4
DDX54-206ENST00000549271 TUBGCP2Q9BSJ2 902 aa12.54□□□□□ -0.4
DDX54-206ENST00000549271 SLC4A5Q9BY07 1137 aa12.54□□□□□ -0.4
DDX54-206ENST00000549271 ABCG4Q9H172 646 aa12.54□□□□□ -0.4
DDX54-206ENST00000549271 OSBPL2Q9H1P3 480 aa12.54□□□□□ -0.4
DDX54-206ENST00000549271 NDST4Q9H3R1 872 aa12.54□□□□□ -0.4
DDX54-206ENST00000549271 USP29Q9HBJ7 922 aa12.54□□□□□ -0.4
DDX54-206ENST00000549271 STIM2Q9P246 746 aa12.54□□□□□ -0.4
DDX54-206ENST00000549271 APEX2Q9UBZ4 518 aa12.54□□□□□ -0.4
DDX54-206ENST00000549271 SEPT3Q9UH03 358 aa12.54□□□□□ -0.4
DDX54-206ENST00000549271 CYTH4Q9UIA0 394 aa12.54□□□□□ -0.4
DDX54-206ENST00000549271 ENTPD2Q9Y5L3 495 aa12.54□□□□□ -0.4
DDX54-206ENST00000549271 SPTBN1Q01082 2364 aaKnown RBP12.54□□□□□ -0.4
DDX54-206ENST00000549271 ITPR2Q14571 2701 aa12.53□□□□□ -0.4
DDX54-206ENST00000549271 TBC1D3DA0A087WVF3 549 aa12.53□□□□□ -0.4
DDX54-206ENST00000549271 TBC1D3IA0A087WXS9 549 aa12.53□□□□□ -0.4
DDX54-206ENST00000549271 TBC1D3EA0A087X179 549 aa12.53□□□□□ -0.4
DDX54-206ENST00000549271 TBC1D3KA0A087X1G2 549 aa12.53□□□□□ -0.4
DDX54-206ENST00000549271 TBC1D3FA6NER0 549 aaPredicted RBP12.53□□□□□ -0.4
DDX54-206ENST00000549271 TBC1D3LB9A6J9 549 aa12.53□□□□□ -0.4
DDX54-206ENST00000549271 FFAR2O15552 330 aa12.53□□□□□ -0.4
DDX54-206ENST00000549271 LETM1O95202 739 aaPredicted RBP12.53□□□□□ -0.4
DDX54-206ENST00000549271 LUC7L3O95232 432 aaKnown RBP12.53□□□□□ -0.4
DDX54-206ENST00000549271 ADH1BP00325 375 aa12.53□□□□□ -0.4
DDX54-206ENST00000549271 IGLV3-25P01717 112 aa12.53□□□□□ -0.4
DDX54-206ENST00000549271 FAM87AP0C7U9 286 aa12.53□□□□□ -0.4
DDX54-206ENST00000549271 TBC1D3HP0C7X1 549 aa12.53□□□□□ -0.4
DDX54-206ENST00000549271 SFTPCP11686 197 aa12.53□□□□□ -0.4
DDX54-206ENST00000549271 C5AR1P21730 350 aa12.53□□□□□ -0.4
DDX54-206ENST00000549271 TGM2P21980 687 aa12.53□□□□□ -0.4
DDX54-206ENST00000549271 DUSP3P51452 185 aaPredicted RBP12.53□□□□□ -0.4
DDX54-206ENST00000549271 INHBCP55103 352 aa12.53□□□□□ -0.4
DDX54-206ENST00000549271 KCNMA1Q12791 1236 aa12.53□□□□□ -0.4
DDX54-206ENST00000549271 EIF4EBP2Q13542 120 aaPredicted RBP12.53□□□□□ -0.4
DDX54-206ENST00000549271 SLC12A1Q13621 1099 aa12.53□□□□□ -0.4
DDX54-206ENST00000549271 CDH18Q13634 790 aa12.53□□□□□ -0.4
DDX54-206ENST00000549271 C4orf17Q53FE4 359 aa12.53□□□□□ -0.4
DDX54-206ENST00000549271 DCAF6Q58WW2 860 aa12.53□□□□□ -0.4
DDX54-206ENST00000549271 FSCBQ5H9T9 825 aa12.53□□□□□ -0.4
DDX54-206ENST00000549271 PITRM1Q5JRX3 1037 aa12.53□□□□□ -0.4
DDX54-206ENST00000549271 TBC1D3GQ6DHY5 549 aa12.53□□□□□ -0.4
DDX54-206ENST00000549271 SMYD5Q6GMV2 418 aa12.53□□□□□ -0.4
DDX54-206ENST00000549271 TBC1D3CQ6IPX1 549 aa12.53□□□□□ -0.4
DDX54-206ENST00000549271 TMEM110Q86TL2 294 aa12.53□□□□□ -0.4
DDX54-206ENST00000549271 CCDC117Q8IWD4 279 aaPredicted RBP12.53□□□□□ -0.4
DDX54-206ENST00000549271 TBC1D3Q8IZP1 549 aaPredicted RBP12.53□□□□□ -0.4
DDX54-206ENST00000549271 FAM81BQ96LP2 452 aa12.53□□□□□ -0.4
DDX54-206ENST00000549271 PSMG3-AS1Q96PY0 264 aa12.53□□□□□ -0.4
DDX54-206ENST00000549271 ARHGAP9Q9BRR9 750 aa12.53□□□□□ -0.4
DDX54-206ENST00000549271 MIS12Q9H081 205 aa12.53□□□□□ -0.4
DDX54-206ENST00000549271 NUCKS1Q9H1E3 243 aaKnown RBP12.53□□□□□ -0.4
DDX54-206ENST00000549271 KLHL11Q9NVR0 708 aa12.53□□□□□ -0.4
DDX54-206ENST00000549271 NLGN3Q9NZ94 848 aa12.53□□□□□ -0.4
DDX54-206ENST00000549271 ERVW-1Q9UQF0 538 aa12.53□□□□□ -0.4
DDX54-206ENST00000549271 NAALADL1Q9UQQ1 740 aa12.53□□□□□ -0.4
DDX54-206ENST00000549271 EDDM13A0A1B0GTR0 161 aa12.52□□□□□ -0.41
DDX54-206ENST00000549271 FOXN3O00409 490 aaPredicted RBP12.52□□□□□ -0.41
DDX54-206ENST00000549271 PIAS2O75928 621 aa12.52□□□□□ -0.41
DDX54-206ENST00000549271 MOCS3O95396 460 aa12.52□□□□□ -0.41
DDX54-206ENST00000549271 PRKCSHP14314 528 aaPredicted RBP12.52□□□□□ -0.41
DDX54-206ENST00000549271 DRD3P35462 400 aa12.52□□□□□ -0.41
DDX54-206ENST00000549271 PSMD8P48556 350 aa12.52□□□□□ -0.41
DDX54-206ENST00000549271 VASPP50552 380 aaPredicted RBP12.52□□□□□ -0.41
DDX54-206ENST00000549271 ECT2LQ008S8 904 aa12.52□□□□□ -0.41
DDX54-206ENST00000549271 STAT4Q14765 748 aa12.52□□□□□ -0.41
DDX54-206ENST00000549271 TCP11X2Q5H9J9 407 aa12.52□□□□□ -0.41
DDX54-206ENST00000549271 SYPL2Q5VXT5 272 aa12.52□□□□□ -0.41
DDX54-206ENST00000549271 USP53Q70EK8 1073 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms