RNA–Protein interactions for RNA: ENST00000549205.1

ERBB3-208, Transcript of erb-b2 receptor tyrosine kinase 3, human

TSL 5

Gene ERBB3, Length 971 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB3-208	ENST00000549205	CCHCR1	Q8TD31	782 aa		12.48	□□□□□ -0.41
ERBB3-208	ENST00000549205	NSMCE1	Q8WV22	266 aa		12.48	□□□□□ -0.41
ERBB3-208	ENST00000549205	SPATA13	Q96N96	652 aa		12.48	□□□□□ -0.41
ERBB3-208	ENST00000549205	ZNF599	Q96NL3	588 aa		12.48	□□□□□ -0.41
ERBB3-208	ENST00000549205	VAT1	Q99536	393 aa		12.48	□□□□□ -0.41
ERBB3-208	ENST00000549205	IL12RB2	Q99665	862 aa		12.48	□□□□□ -0.41
ERBB3-208	ENST00000549205	C2orf49	Q9BVC5	232 aa	Predicted RBP	12.48	□□□□□ -0.41
ERBB3-208	ENST00000549205	RAB17	Q9H0T7	212 aa		12.48	□□□□□ -0.41
ERBB3-208	ENST00000549205	KCNK12	Q9HB15	430 aa		12.48	□□□□□ -0.41
ERBB3-208	ENST00000549205	PDF	Q9HBH1	243 aa		12.48	□□□□□ -0.41
ERBB3-208	ENST00000549205	PRDM6	Q9NQX0	595 aa		12.48	□□□□□ -0.41
ERBB3-208	ENST00000549205	DNAJC17	Q9NVM6	304 aa	Known RBP	12.48	□□□□□ -0.41
ERBB3-208	ENST00000549205	DMGDH	Q9UI17	866 aa	Known RBP	12.48	□□□□□ -0.41
ERBB3-208	ENST00000549205	TRHDE	Q9UKU6	1024 aa		12.48	□□□□□ -0.41
ERBB3-208	ENST00000549205	INTS6	Q9UL03	887 aa	Known RBP	12.48	□□□□□ -0.41
ERBB3-208	ENST00000549205	UTP11	Q9Y3A2	253 aa	Known RBP	12.48	□□□□□ -0.41
ERBB3-208	ENST00000549205	CXorf51A	A0A1B0GTR3	108 aa		12.47	□□□□□ -0.41
ERBB3-208	ENST00000549205	SNAP91	O60641	907 aa		12.47	□□□□□ -0.41
ERBB3-208	ENST00000549205	TULP3	O75386	442 aa		12.47	□□□□□ -0.41
ERBB3-208	ENST00000549205	JCHAIN	P01591	159 aa		12.47	□□□□□ -0.41
ERBB3-208	ENST00000549205	ZSCAN5DP	P0CG00	497 aa		12.47	□□□□□ -0.41
ERBB3-208	ENST00000549205	IL9	P15248	144 aa		12.47	□□□□□ -0.41
ERBB3-208	ENST00000549205	GJA4	P35212	333 aa		12.47	□□□□□ -0.41
ERBB3-208	ENST00000549205	ACTN2	P35609	894 aa		12.47	□□□□□ -0.41
ERBB3-208	ENST00000549205	DGKG	P49619	791 aa		12.47	□□□□□ -0.41
ERBB3-208	ENST00000549205	NUMB	P49757	651 aa		12.47	□□□□□ -0.41
ERBB3-208	ENST00000549205	HNRNPD	Q14103	355 aa	Known RBP	12.47	□□□□□ -0.41
ERBB3-208	ENST00000549205	FUT11	Q495W5	492 aa		12.47	□□□□□ -0.41
ERBB3-208	ENST00000549205	TEX44	Q53QW1	395 aa		12.47	□□□□□ -0.41
ERBB3-208	ENST00000549205	PITRM1	Q5JRX3	1037 aa		12.47	□□□□□ -0.41
ERBB3-208	ENST00000549205	ANKRD20A2	Q5SQ80	823 aa		12.47	□□□□□ -0.41
ERBB3-208	ENST00000549205	ANKRD20A1	Q5TYW2	823 aa		12.47	□□□□□ -0.41
ERBB3-208	ENST00000549205	ANKRD20A3	Q5VUR7	823 aa		12.47	□□□□□ -0.41
ERBB3-208	ENST00000549205	GRAMD4	Q6IC98	578 aa		12.47	□□□□□ -0.41
ERBB3-208	ENST00000549205	C4orf22	Q6V702	233 aa		12.47	□□□□□ -0.41
ERBB3-208	ENST00000549205	C12orf40	Q86WS4	652 aa		12.47	□□□□□ -0.41
ERBB3-208	ENST00000549205	ZNF567	Q8N184	647 aa		12.47	□□□□□ -0.41
ERBB3-208	ENST00000549205	SLC44A3	Q8N4M1	653 aa		12.47	□□□□□ -0.41
ERBB3-208	ENST00000549205	CCDC110	Q8TBZ0	833 aa		12.47	□□□□□ -0.41
ERBB3-208	ENST00000549205	WFIKKN2	Q8TEU8	576 aa		12.47	□□□□□ -0.41
ERBB3-208	ENST00000549205	SEC14L1	Q92503	715 aa		12.47	□□□□□ -0.41
ERBB3-208	ENST00000549205	RUBCN	Q92622	972 aa		12.47	□□□□□ -0.41
ERBB3-208	ENST00000549205	ACD	Q96AP0	544 aa		12.47	□□□□□ -0.41
ERBB3-208	ENST00000549205	ZNF419	Q96HQ0	510 aa	Predicted RBP	12.47	□□□□□ -0.41
ERBB3-208	ENST00000549205	TEKT5	Q96M29	485 aa		12.47	□□□□□ -0.41
ERBB3-208	ENST00000549205	CEP41	Q9BYV8	373 aa		12.47	□□□□□ -0.41
ERBB3-208	ENST00000549205	ANKZF1	Q9H8Y5	726 aa		12.47	□□□□□ -0.41
ERBB3-208	ENST00000549205	GTSE1	Q9NYZ3	720 aa		12.47	□□□□□ -0.41
ERBB3-208	ENST00000549205	PAK5	Q9P286	719 aa		12.47	□□□□□ -0.41
ERBB3-208	ENST00000549205	DEC1	Q9P2X7	70 aa		12.47	□□□□□ -0.41
ERBB3-208	ENST00000549205	ASIC3	Q9UHC3	531 aa		12.47	□□□□□ -0.41
ERBB3-208	ENST00000549205	VPS51	Q9UID3	782 aa		12.47	□□□□□ -0.41
ERBB3-208	ENST00000549205	SLC27A6	Q9Y2P4	619 aa		12.47	□□□□□ -0.41
ERBB3-208	ENST00000549205	MUC22	E2RYF6	1773 aa	Predicted RBP	12.46	□□□□□ -0.41
ERBB3-208	ENST00000549205	CKAP5	Q14008	2032 aa		12.46	□□□□□ -0.41
ERBB3-208	ENST00000549205	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	12.46	□□□□□ -0.41
ERBB3-208	ENST00000549205	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	12.46	□□□□□ -0.41
ERBB3-208	ENST00000549205	LOC730098	B7Z3J9	87 aa		12.46	□□□□□ -0.41
ERBB3-208	ENST00000549205	TRIM24	O15164	1050 aa		12.46	□□□□□ -0.41
ERBB3-208	ENST00000549205	IVD	P26440	423 aa		12.46	□□□□□ -0.41
ERBB3-208	ENST00000549205	ADCY8	P40145	1251 aa		12.46	□□□□□ -0.41
ERBB3-208	ENST00000549205	OPRD1	P41143	372 aa		12.46	□□□□□ -0.41
ERBB3-208	ENST00000549205	EIF2D	P41214	584 aa	Known RBP	12.46	□□□□□ -0.41
ERBB3-208	ENST00000549205	VPS41	P49754	854 aa		12.46	□□□□□ -0.41
ERBB3-208	ENST00000549205	RENBP	P51606	427 aa		12.46	□□□□□ -0.41
ERBB3-208	ENST00000549205	GEMIN4	P57678	1058 aa	Known RBP	12.46	□□□□□ -0.41
ERBB3-208	ENST00000549205	ARF5	P84085	180 aa		12.46	□□□□□ -0.41
ERBB3-208	ENST00000549205	GUCY2D	Q02846	1103 aa		12.46	□□□□□ -0.41
ERBB3-208	ENST00000549205	SULT2A1	Q06520	285 aa		12.46	□□□□□ -0.41
ERBB3-208	ENST00000549205	SLC10A7	Q0GE19	358 aa		12.46	□□□□□ -0.41
ERBB3-208	ENST00000549205	GPS1	Q13098	491 aa		12.46	□□□□□ -0.41
ERBB3-208	ENST00000549205	RFTN1	Q14699	578 aa	Predicted RBP	12.46	□□□□□ -0.41
ERBB3-208	ENST00000549205	LBR	Q14739	615 aa	Known RBP	12.46	□□□□□ -0.41
ERBB3-208	ENST00000549205	GEN1	Q17RS7	908 aa		12.46	□□□□□ -0.41
ERBB3-208	ENST00000549205	MARC1	Q5VT66	337 aa		12.46	□□□□□ -0.41
ERBB3-208	ENST00000549205	ITPRIPL1	Q6GPH6	555 aa		12.46	□□□□□ -0.41
ERBB3-208	ENST00000549205	LEKR1	Q6ZMV7	388 aa		12.46	□□□□□ -0.41
ERBB3-208	ENST00000549205	ARHGEF18	Q6ZSZ5	1173 aa		12.46	□□□□□ -0.41
ERBB3-208	ENST00000549205	AHI1	Q8N157	1196 aa		12.46	□□□□□ -0.41
ERBB3-208	ENST00000549205	PHTF2	Q8N3S3	785 aa		12.46	□□□□□ -0.41
ERBB3-208	ENST00000549205	TEX26	Q8N6G2	289 aa		12.46	□□□□□ -0.41
ERBB3-208	ENST00000549205	GPR161	Q8N6U8	529 aa	Known RBP	12.46	□□□□□ -0.41
ERBB3-208	ENST00000549205	CNTD1	Q8N815	330 aa		12.46	□□□□□ -0.41
ERBB3-208	ENST00000549205	TTC8	Q8TAM2	541 aa		12.46	□□□□□ -0.41
ERBB3-208	ENST00000549205	CSGALNACT1	Q8TDX6	532 aa		12.46	□□□□□ -0.41
ERBB3-208	ENST00000549205	USP33	Q8TEY7	942 aa		12.46	□□□□□ -0.41
ERBB3-208	ENST00000549205	AGAP3	Q96P47	875 aa		12.46	□□□□□ -0.41
ERBB3-208	ENST00000549205	TRIM31	Q9BZY9	425 aa		12.46	□□□□□ -0.41
ERBB3-208	ENST00000549205	DPH5	Q9H2P9	285 aa		12.46	□□□□□ -0.41
ERBB3-208	ENST00000549205	EPB41L5	Q9HCM4	733 aa		12.46	□□□□□ -0.41
ERBB3-208	ENST00000549205	TRPV5	Q9NQA5	729 aa		12.46	□□□□□ -0.41
ERBB3-208	ENST00000549205	KLHL8	Q9P2G9	620 aa	Predicted RBP	12.46	□□□□□ -0.41
ERBB3-208	ENST00000549205	THEG	Q9P2T0	379 aa		12.46	□□□□□ -0.41
ERBB3-208	ENST00000549205	UBA2	Q9UBT2	640 aa	Predicted RBP	12.46	□□□□□ -0.41
ERBB3-208	ENST00000549205	ESYT3	A0FGR9	886 aa		12.45	□□□□□ -0.42
ERBB3-208	ENST00000549205	NEBL	O76041	1014 aa		12.45	□□□□□ -0.42
ERBB3-208	ENST00000549205	HLA-DQB2	P05538	268 aa		12.45	□□□□□ -0.42
ERBB3-208	ENST00000549205	ASGR2	P07307	311 aa		12.45	□□□□□ -0.42
ERBB3-208	ENST00000549205	MMP13	P45452	471 aa		12.45	□□□□□ -0.42
ERBB3-208	ENST00000549205	RPL21	P46778	160 aa	Known RBP	12.45	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms