RNA–Protein interactions for RNA: ENST00000548068.5

RAB5B-204, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-204ENST00000548068 FCRL5Q96RD9 977 aa12.62□□□□□ -0.39
RAB5B-204ENST00000548068 NAT9Q9BTE0 207 aa12.62□□□□□ -0.39
RAB5B-204ENST00000548068 STMN4Q9H169 189 aaPredicted RBP12.62□□□□□ -0.39
RAB5B-204ENST00000548068 EPB41L4BQ9H329 900 aa12.62□□□□□ -0.39
RAB5B-204ENST00000548068 NSUN3Q9H649 340 aaKnown RBP12.62□□□□□ -0.39
RAB5B-204ENST00000548068 VPS37BQ9H9H4 285 aa12.62□□□□□ -0.39
RAB5B-204ENST00000548068 RBM22Q9NW64 420 aaKnown RBP eCLIP12.62□□□□□ -0.39
RAB5B-204ENST00000548068 NFS1Q9Y697 457 aa12.62□□□□□ -0.39
RAB5B-204ENST00000548068 NOTCH4Q99466 2003 aa12.62□□□□□ -0.39
RAB5B-204ENST00000548068 AGPSO00116 658 aa12.61□□□□□ -0.39
RAB5B-204ENST00000548068 TRDMT1O14717 391 aaKnown RBP12.61□□□□□ -0.39
RAB5B-204ENST00000548068 KDELR3O43731 214 aa12.61□□□□□ -0.39
RAB5B-204ENST00000548068 CACNG3O60359 315 aa12.61□□□□□ -0.39
RAB5B-204ENST00000548068 CPP00450 1065 aa12.61□□□□□ -0.39
RAB5B-204ENST00000548068 CD68P34810 354 aaPredicted RBP12.61□□□□□ -0.39
RAB5B-204ENST00000548068 GEMIN4P57678 1058 aaKnown RBP12.61□□□□□ -0.39
RAB5B-204ENST00000548068 ZNF844Q08AG5 666 aa12.61□□□□□ -0.39
RAB5B-204ENST00000548068 KCNC3Q14003 757 aa12.61□□□□□ -0.39
RAB5B-204ENST00000548068 ZNF235Q14590 738 aa12.61□□□□□ -0.39
RAB5B-204ENST00000548068 LBRQ14739 615 aaKnown RBP12.61□□□□□ -0.39
RAB5B-204ENST00000548068 BBS7Q8IWZ6 715 aa12.61□□□□□ -0.39
RAB5B-204ENST00000548068 PALM2Q8IXS6 379 aa12.61□□□□□ -0.39
RAB5B-204ENST00000548068 KLHDC8BQ8IXV7 354 aa12.61□□□□□ -0.39
RAB5B-204ENST00000548068 CARNMT1Q8N4J0 409 aa12.61□□□□□ -0.39
RAB5B-204ENST00000548068 TEX26Q8N6G2 289 aa12.61□□□□□ -0.39
RAB5B-204ENST00000548068 FBXO36Q8NEA4 188 aa12.61□□□□□ -0.39
RAB5B-204ENST00000548068 TTC16Q8NEE8 873 aa12.61□□□□□ -0.39
RAB5B-204ENST00000548068 USP33Q8TEY7 942 aa12.61□□□□□ -0.39
RAB5B-204ENST00000548068 DDI1Q8WTU0 396 aa12.61□□□□□ -0.39
RAB5B-204ENST00000548068 MUC3BQ9H195 1237 aa12.61□□□□□ -0.39
RAB5B-204ENST00000548068 SLC25A51Q9H1U9 297 aa12.61□□□□□ -0.39
RAB5B-204ENST00000548068 ATP13A1Q9HD20 1204 aa12.61□□□□□ -0.39
RAB5B-204ENST00000548068 TTLL3Q9Y4R7 772 aa12.61□□□□□ -0.39
RAB5B-204ENST00000548068 C2orf16Q68DN1 1984 aa12.6□□□□□ -0.39
RAB5B-204ENST00000548068 EPOPA6NHQ4 379 aa12.6□□□□□ -0.39
RAB5B-204ENST00000548068 HMGB1P1B2RPK0 211 aaPredicted RBP12.6□□□□□ -0.39
RAB5B-204ENST00000548068 J3KR12 359 aa12.6□□□□□ -0.39
RAB5B-204ENST00000548068 TCEA3O75764 348 aa12.6□□□□□ -0.39
RAB5B-204ENST00000548068 PEX11BO96011 259 aa12.6□□□□□ -0.39
RAB5B-204ENST00000548068 HLA-DQB2P05538 268 aa12.6□□□□□ -0.39
RAB5B-204ENST00000548068 CEBPBP17676 345 aa12.6□□□□□ -0.39
RAB5B-204ENST00000548068 HOXD9P28356 352 aaPredicted RBP12.6□□□□□ -0.39
RAB5B-204ENST00000548068 OAS2P29728 719 aaKnown RBP12.6□□□□□ -0.39
RAB5B-204ENST00000548068 ACVRL1P37023 503 aa12.6□□□□□ -0.39
RAB5B-204ENST00000548068 ELK3P41970 407 aa12.6□□□□□ -0.39
RAB5B-204ENST00000548068 SGSHP51688 502 aa12.6□□□□□ -0.39
RAB5B-204ENST00000548068 NTHL1P78549 312 aa12.6□□□□□ -0.39
RAB5B-204ENST00000548068 ZXDBP98169 803 aa12.6□□□□□ -0.39
RAB5B-204ENST00000548068 GAD2Q05329 585 aa12.6□□□□□ -0.39
RAB5B-204ENST00000548068 MPP3Q13368 585 aa12.6□□□□□ -0.39
RAB5B-204ENST00000548068 SLC12A1Q13621 1099 aa12.6□□□□□ -0.39
RAB5B-204ENST00000548068 ZNF77Q15935 545 aa12.6□□□□□ -0.39
RAB5B-204ENST00000548068 SYCP2LQ5T4T6 812 aa12.6□□□□□ -0.39
RAB5B-204ENST00000548068 AGBL2Q5U5Z8 902 aa12.6□□□□□ -0.39
RAB5B-204ENST00000548068 ARMC3Q5W041 872 aa12.6□□□□□ -0.39
RAB5B-204ENST00000548068 RNF219Q5W0B1 726 aaPredicted RBP12.6□□□□□ -0.39
RAB5B-204ENST00000548068 KCTD11Q693B1 232 aa12.6□□□□□ -0.39
RAB5B-204ENST00000548068 CXorf57Q6NSI4 855 aaKnown RBP12.6□□□□□ -0.39
RAB5B-204ENST00000548068 TMEM184AQ6ZMB5 413 aa12.6□□□□□ -0.39
RAB5B-204ENST00000548068 CAND1Q86VP6 1230 aaKnown RBP12.6□□□□□ -0.39
RAB5B-204ENST00000548068 ANKMY2Q8IV38 441 aa12.6□□□□□ -0.39
RAB5B-204ENST00000548068 MFN1Q8IWA4 741 aa12.6□□□□□ -0.39
RAB5B-204ENST00000548068 RIBC1Q8N443 379 aaPredicted RBP12.6□□□□□ -0.39
RAB5B-204ENST00000548068 CELF5Q8N6W0 485 aaKnown RBP12.6□□□□□ -0.39
RAB5B-204ENST00000548068 EFHBQ8N7U6 833 aa12.6□□□□□ -0.39
RAB5B-204ENST00000548068 CNTD1Q8N815 330 aa12.6□□□□□ -0.39
RAB5B-204ENST00000548068 VN1R2Q8NFZ6 395 aa12.6□□□□□ -0.39
RAB5B-204ENST00000548068 USP13Q92995 863 aaPredicted RBP12.6□□□□□ -0.39
RAB5B-204ENST00000548068 SPON2Q9BUD6 331 aa12.6□□□□□ -0.39
RAB5B-204ENST00000548068 ACE2Q9BYF1 805 aaPredicted RBP12.6□□□□□ -0.39
RAB5B-204ENST00000548068 POLR1EQ9GZS1 481 aaKnown RBP12.6□□□□□ -0.39
RAB5B-204ENST00000548068 NT5MQ9NPB1 228 aa12.6□□□□□ -0.39
RAB5B-204ENST00000548068 VPS45Q9NRW7 570 aa12.6□□□□□ -0.39
RAB5B-204ENST00000548068 LMCD1Q9NZU5 365 aa12.6□□□□□ -0.39
RAB5B-204ENST00000548068 SAMD15Q9P1V8 674 aa12.6□□□□□ -0.39
RAB5B-204ENST00000548068 UBA2Q9UBT2 640 aaPredicted RBP12.6□□□□□ -0.39
RAB5B-204ENST00000548068 SEPT3Q9UH03 358 aa12.6□□□□□ -0.39
RAB5B-204ENST00000548068 CHMP2BQ9UQN3 213 aa12.6□□□□□ -0.39
RAB5B-204ENST00000548068 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.6□□□□□ -0.39
RAB5B-204ENST00000548068 TEX264Q9Y6I9 313 aa12.6□□□□□ -0.39
RAB5B-204ENST00000548068 CHD9Q3L8U1 2897 aa12.6□□□□□ -0.39
RAB5B-204ENST00000548068 MIA3Q5JRA6 1907 aa12.59□□□□□ -0.39
RAB5B-204ENST00000548068 CXorf51AA0A1B0GTR3 108 aa12.59□□□□□ -0.39
RAB5B-204ENST00000548068 SDR42E2A6NKP2 422 aa12.59□□□□□ -0.39
RAB5B-204ENST00000548068 F5H423 210 aaPredicted RBP12.59□□□□□ -0.39
RAB5B-204ENST00000548068 H3BQF6 201 aa12.59□□□□□ -0.39
RAB5B-204ENST00000548068 RASGRF2O14827 1237 aa12.59□□□□□ -0.39
RAB5B-204ENST00000548068 RNF40O75150 1001 aa12.59□□□□□ -0.39
RAB5B-204ENST00000548068 SYF2O95926 243 aaKnown RBP12.59□□□□□ -0.39
RAB5B-204ENST00000548068 HOXB8P17481 243 aaPredicted RBP12.59□□□□□ -0.39
RAB5B-204ENST00000548068 CES1P23141 567 aa12.59□□□□□ -0.39
RAB5B-204ENST00000548068 FSHRP23945 695 aa12.59□□□□□ -0.39
RAB5B-204ENST00000548068 ATP5DP30049 168 aa12.59□□□□□ -0.39
RAB5B-204ENST00000548068 STX2P32856 288 aa12.59□□□□□ -0.39
RAB5B-204ENST00000548068 NPY2RP49146 381 aa12.59□□□□□ -0.39
RAB5B-204ENST00000548068 CDH17Q12864 832 aa12.59□□□□□ -0.39
RAB5B-204ENST00000548068 FASTKD3Q14CZ7 662 aaKnown RBP12.59□□□□□ -0.39
RAB5B-204ENST00000548068 SLC14A2Q15849 920 aa12.59□□□□□ -0.39
RAB5B-204ENST00000548068 KLHL38Q2WGJ6 581 aa12.59□□□□□ -0.39
RAB5B-204ENST00000548068 MSS51Q4VC12 460 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms