RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 GJB6O95452 261 aa13.67□□□□□ -0.22
CPSF6-204ENST00000547486 MMP8P22894 467 aa13.67□□□□□ -0.22
CPSF6-204ENST00000547486 OR1E1P30953 314 aa13.67□□□□□ -0.22
CPSF6-204ENST00000547486 SOX5P35711 763 aa13.67□□□□□ -0.22
CPSF6-204ENST00000547486 NXPH1P58417 271 aa13.67□□□□□ -0.22
CPSF6-204ENST00000547486 KRT83P78385 493 aa13.67□□□□□ -0.22
CPSF6-204ENST00000547486 ATP11AP98196 1134 aa13.67□□□□□ -0.22
CPSF6-204ENST00000547486 FMO1Q01740 532 aa13.67□□□□□ -0.22
CPSF6-204ENST00000547486 CDR2Q01850 454 aa13.67□□□□□ -0.22
CPSF6-204ENST00000547486 CCDC14Q49A88 953 aa13.67□□□□□ -0.22
CPSF6-204ENST00000547486 LRRC31Q6UY01 552 aa13.67□□□□□ -0.22
CPSF6-204ENST00000547486 ARCQ7LC44 396 aa13.67□□□□□ -0.22
CPSF6-204ENST00000547486 TMPRSS7Q7RTY8 843 aa13.67□□□□□ -0.22
CPSF6-204ENST00000547486 SPATS2Q86XZ4 545 aaKnown RBP13.67□□□□□ -0.22
CPSF6-204ENST00000547486 CHST14Q8NCH0 376 aa13.67□□□□□ -0.22
CPSF6-204ENST00000547486 SAP25Q8TEE9 199 aa13.67□□□□□ -0.22
CPSF6-204ENST00000547486 PCDHB18PQ96TA0 734 aa13.67□□□□□ -0.22
CPSF6-204ENST00000547486 C2orf49Q9BVC5 232 aaPredicted RBP13.67□□□□□ -0.22
CPSF6-204ENST00000547486 KDM4CQ9H3R0 1056 aa13.67□□□□□ -0.22
CPSF6-204ENST00000547486 METTL5Q9NRN9 209 aaKnown RBP13.67□□□□□ -0.22
CPSF6-204ENST00000547486 CA5BQ9Y2D0 317 aa13.67□□□□□ -0.22
CPSF6-204ENST00000547486 SIK3Q9Y2K2 1263 aa13.67□□□□□ -0.22
CPSF6-204ENST00000547486 IGF2RP11717 2491 aa13.67□□□□□ -0.22
CPSF6-204ENST00000547486 C1QTNF3-AMACRE9PGA6 284 aa13.66□□□□□ -0.22
CPSF6-204ENST00000547486 CBX4O00257 560 aa13.66□□□□□ -0.22
CPSF6-204ENST00000547486 ZMPSTE24O75844 475 aa13.66□□□□□ -0.22
CPSF6-204ENST00000547486 CHRNA3P32297 505 aa13.66□□□□□ -0.22
CPSF6-204ENST00000547486 BNIP3Q12983 259 aa13.66□□□□□ -0.22
CPSF6-204ENST00000547486 C15orf59Q2T9L4 293 aaPredicted RBP13.66□□□□□ -0.22
CPSF6-204ENST00000547486 C6orf118Q5T5N4 469 aa13.66□□□□□ -0.22
CPSF6-204ENST00000547486 PIP5KL1Q5T9C9 394 aa13.66□□□□□ -0.22
CPSF6-204ENST00000547486 NAPEPLDQ6IQ20 393 aa13.66□□□□□ -0.22
CPSF6-204ENST00000547486 PRPF39Q86UA1 669 aaKnown RBP13.66□□□□□ -0.22
CPSF6-204ENST00000547486 ZNF677Q86XU0 584 aa13.66□□□□□ -0.22
CPSF6-204ENST00000547486 MFSD2AQ8NA29 543 aa13.66□□□□□ -0.22
CPSF6-204ENST00000547486 DCAF4L2Q8NA75 395 aa13.66□□□□□ -0.22
CPSF6-204ENST00000547486 TMIEQ8NEW7 156 aa13.66□□□□□ -0.22
CPSF6-204ENST00000547486 JOSD2Q8TAC2 188 aa13.66□□□□□ -0.22
CPSF6-204ENST00000547486 RXFP2Q8WXD0 754 aa13.66□□□□□ -0.22
CPSF6-204ENST00000547486 ARRDC3Q96B67 414 aa13.66□□□□□ -0.22
CPSF6-204ENST00000547486 SKA1Q96BD8 255 aa13.66□□□□□ -0.22
CPSF6-204ENST00000547486 SPON2Q9BUD6 331 aa13.66□□□□□ -0.22
CPSF6-204ENST00000547486 TNKS2Q9H2K2 1166 aa13.66□□□□□ -0.22
CPSF6-204ENST00000547486 PAXBP1Q9Y5B6 917 aa13.66□□□□□ -0.22
CPSF6-204ENST00000547486 ACTL7AQ9Y615 435 aa13.66□□□□□ -0.22
CPSF6-204ENST00000547486 ILVBLA1L0T0 632 aa13.65□□□□□ -0.22
CPSF6-204ENST00000547486 FAM72CH0Y354 149 aa13.65□□□□□ -0.22
CPSF6-204ENST00000547486 KPNA3O00505 521 aaPredicted RBP13.65□□□□□ -0.22
CPSF6-204ENST00000547486 UNGP13051 313 aaPredicted RBP13.65□□□□□ -0.22
CPSF6-204ENST00000547486 ADRA1BP35368 520 aa13.65□□□□□ -0.22
CPSF6-204ENST00000547486 PTP4A2Q12974 167 aa13.65□□□□□ -0.22
CPSF6-204ENST00000547486 SYCP1Q15431 976 aa13.65□□□□□ -0.22
CPSF6-204ENST00000547486 CCDC157Q569K6 752 aa13.65□□□□□ -0.22
CPSF6-204ENST00000547486 ARSIQ5FYB1 569 aa13.65□□□□□ -0.22
CPSF6-204ENST00000547486 ACBD5Q5T8D3 534 aaPredicted RBP13.65□□□□□ -0.22
CPSF6-204ENST00000547486 FAM72AQ5TYM5 149 aa13.65□□□□□ -0.22
CPSF6-204ENST00000547486 FAM72DQ6L9T8 149 aa13.65□□□□□ -0.22
CPSF6-204ENST00000547486 DPY19L3Q6ZPD9 716 aa13.65□□□□□ -0.22
CPSF6-204ENST00000547486 TRIM69Q86WT6 500 aa13.65□□□□□ -0.22
CPSF6-204ENST00000547486 FAM72BQ86X60 149 aa13.65□□□□□ -0.22
CPSF6-204ENST00000547486 MSANTD4Q8NCY6 345 aa13.65□□□□□ -0.22
CPSF6-204ENST00000547486 KLK6Q92876 244 aa13.65□□□□□ -0.22
CPSF6-204ENST00000547486 C11orf70Q9BRQ4 267 aa13.65□□□□□ -0.22
CPSF6-204ENST00000547486 ZYG11BQ9C0D3 744 aa13.65□□□□□ -0.22
CPSF6-204ENST00000547486 GDF3Q9NR23 364 aa13.65□□□□□ -0.22
CPSF6-204ENST00000547486 NDFIP2Q9NV92 336 aa13.65□□□□□ -0.22
CPSF6-204ENST00000547486 TMEM51Q9NW97 253 aa13.65□□□□□ -0.22
CPSF6-204ENST00000547486 PPARGC1AQ9UBK2 798 aaKnown RBP13.65□□□□□ -0.22
CPSF6-204ENST00000547486 LIMA1Q9UHB6 759 aaKnown RBP13.65□□□□□ -0.22
CPSF6-204ENST00000547486 TPX2Q9ULW0 747 aaKnown RBP13.65□□□□□ -0.22
CPSF6-204ENST00000547486 CABIN1Q9Y6J0 2220 aa13.65□□□□□ -0.22
CPSF6-204ENST00000547486 PLXNA2O75051 1894 aa13.65□□□□□ -0.22
CPSF6-204ENST00000547486 TMEM131Q92545 1883 aa13.64□□□□□ -0.23
CPSF6-204ENST00000547486 A0A1W2PQU0 124 aa13.64□□□□□ -0.23
CPSF6-204ENST00000547486 FAM149AA5PLN7 773 aa13.64□□□□□ -0.23
CPSF6-204ENST00000547486 LRRC10BA6NIK2 292 aa13.64□□□□□ -0.23
CPSF6-204ENST00000547486 C2CD4BA6NLJ0 364 aa13.64□□□□□ -0.23
CPSF6-204ENST00000547486 RNGTTO60942 597 aaKnown RBP13.64□□□□□ -0.23
CPSF6-204ENST00000547486 CD160O95971 181 aa13.64□□□□□ -0.23
CPSF6-204ENST00000547486 ITGAVP06756 1048 aa13.64□□□□□ -0.23
CPSF6-204ENST00000547486 ACVRL1P37023 503 aa13.64□□□□□ -0.23
CPSF6-204ENST00000547486 STAT1P42224 750 aa13.64□□□□□ -0.23
CPSF6-204ENST00000547486 RXRGP48443 463 aa13.64□□□□□ -0.23
CPSF6-204ENST00000547486 COPB1P53618 953 aaKnown RBP13.64□□□□□ -0.23
CPSF6-204ENST00000547486 ARF5P84085 180 aa13.64□□□□□ -0.23
CPSF6-204ENST00000547486 CDO1Q16878 200 aa13.64□□□□□ -0.23
CPSF6-204ENST00000547486 FKBP15Q5T1M5 1219 aa13.64□□□□□ -0.23
CPSF6-204ENST00000547486 C22orf39Q6P5X5 142 aa13.64□□□□□ -0.23
CPSF6-204ENST00000547486 DHRS13Q6UX07 377 aa13.64□□□□□ -0.23
CPSF6-204ENST00000547486 APTXQ7Z2E3 356 aaKnown RBP13.64□□□□□ -0.23
CPSF6-204ENST00000547486 KANSL1Q7Z3B3 1105 aa13.64□□□□□ -0.23
CPSF6-204ENST00000547486 PROSER1Q86XN7 944 aa13.64□□□□□ -0.23
CPSF6-204ENST00000547486 DRC7Q8IY82 874 aa13.64□□□□□ -0.23
CPSF6-204ENST00000547486 EID2Q8N6I1 236 aa13.64□□□□□ -0.23
CPSF6-204ENST00000547486 MDM1Q8TC05 714 aa13.64□□□□□ -0.23
CPSF6-204ENST00000547486 CENPIQ92674 756 aaPredicted RBP13.64□□□□□ -0.23
CPSF6-204ENST00000547486 HSD3B7Q9H2F3 369 aa13.64□□□□□ -0.23
CPSF6-204ENST00000547486 CAAP1Q9H8G2 361 aa13.64□□□□□ -0.23
CPSF6-204ENST00000547486 ERVMER34-1Q9H9K5 563 aa13.64□□□□□ -0.23
CPSF6-204ENST00000547486 ATP13A1Q9HD20 1204 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms