RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 ATPAF1Q5TC12 328 aaPredicted RBP4.5□□□□□ -1.69
CCDC38-204ENST00000546816 NFRKBQ6P4R8 1299 aa4.5□□□□□ -1.69
CCDC38-204ENST00000546816 SPSB3Q6PJ21 355 aa4.5□□□□□ -1.69
CCDC38-204ENST00000546816 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.5□□□□□ -1.69
CCDC38-204ENST00000546816 ARMC9Q7Z3E5 817 aa4.5□□□□□ -1.69
CCDC38-204ENST00000546816 DPP10Q8N608 796 aa4.5□□□□□ -1.69
CCDC38-204ENST00000546816 ZNF527Q8NB42 609 aa4.5□□□□□ -1.69
CCDC38-204ENST00000546816 SCAMP5Q8TAC9 235 aa4.5□□□□□ -1.69
CCDC38-204ENST00000546816 BICD2Q8TD16 824 aa4.5□□□□□ -1.69
CCDC38-204ENST00000546816 SLC2A12Q8TD20 617 aa4.5□□□□□ -1.69
CCDC38-204ENST00000546816 ABHD16BQ9H3Z7 469 aa4.5□□□□□ -1.69
CCDC38-204ENST00000546816 KLHL31Q9H511 634 aa4.5□□□□□ -1.69
CCDC38-204ENST00000546816 SEPSECSQ9HD40 501 aaKnown RBP4.5□□□□□ -1.69
CCDC38-204ENST00000546816 RAI2Q9Y5P3 530 aa4.5□□□□□ -1.69
CCDC38-204ENST00000546816 A0A087WV62 115 aa4.49□□□□□ -1.69
CCDC38-204ENST00000546816 NPIPB13A6NJU9 1138 aa4.49□□□□□ -1.69
CCDC38-204ENST00000546816 SRRM3A6NNA2 597 aaPredicted RBP4.49□□□□□ -1.69
CCDC38-204ENST00000546816 NPIPB5A8MRT5 1133 aa4.49□□□□□ -1.69
CCDC38-204ENST00000546816 NPIPB4C9JG80 1138 aa4.49□□□□□ -1.69
CCDC38-204ENST00000546816 UNGP13051 313 aaPredicted RBP4.49□□□□□ -1.69
CCDC38-204ENST00000546816 TCEA1P23193 301 aaKnown RBP4.49□□□□□ -1.69
CCDC38-204ENST00000546816 SERPINB3P29508 390 aa4.49□□□□□ -1.69
CCDC38-204ENST00000546816 TYK2P29597 1187 aa4.49□□□□□ -1.69
CCDC38-204ENST00000546816 PPP3CCP48454 512 aa4.49□□□□□ -1.69
CCDC38-204ENST00000546816 PCP4P48539 62 aa4.49□□□□□ -1.69
CCDC38-204ENST00000546816 CYP2J2P51589 502 aa4.49□□□□□ -1.69
CCDC38-204ENST00000546816 KRTAP10-12P60413 245 aa4.49□□□□□ -1.69
CCDC38-204ENST00000546816 DCTN1Q14203 1278 aa4.49□□□□□ -1.69
CCDC38-204ENST00000546816 GALNTL6Q49A17 601 aa4.49□□□□□ -1.69
CCDC38-204ENST00000546816 FAM171A1Q5VUB5 890 aa4.49□□□□□ -1.69
CCDC38-204ENST00000546816 RNF144BQ7Z419 303 aa4.49□□□□□ -1.69
CCDC38-204ENST00000546816 SLC44A2Q8IWA5 706 aaPredicted RBP4.49□□□□□ -1.69
CCDC38-204ENST00000546816 SVIPQ8NHG7 77 aa4.49□□□□□ -1.69
CCDC38-204ENST00000546816 WDR12Q9GZL7 423 aaKnown RBP4.49□□□□□ -1.69
CCDC38-204ENST00000546816 BRD8Q9H0E9 1235 aa4.49□□□□□ -1.69
CCDC38-204ENST00000546816 PABPC3Q9H361 631 aaKnown RBP4.49□□□□□ -1.69
CCDC38-204ENST00000546816 CATSPERBQ9H7T0 1116 aa4.49□□□□□ -1.69
CCDC38-204ENST00000546816 PRDM8Q9NQV8 689 aa4.49□□□□□ -1.69
CCDC38-204ENST00000546816 HERC5Q9UII4 1024 aaKnown RBP4.49□□□□□ -1.69
CCDC38-204ENST00000546816 MST1RQ04912 1400 aa4.48□□□□□ -1.69
CCDC38-204ENST00000546816 MS4A18H0YCH9 400 aa4.48□□□□□ -1.69
CCDC38-204ENST00000546816 ACTL6BO94805 426 aa4.48□□□□□ -1.69
CCDC38-204ENST00000546816 GLUD1P00367 558 aa4.48□□□□□ -1.69
CCDC38-204ENST00000546816 HLA-DQA2P01906 255 aa4.48□□□□□ -1.69
CCDC38-204ENST00000546816 UMODP07911 640 aa4.48□□□□□ -1.69
CCDC38-204ENST00000546816 ITGA2BP08514 1039 aa4.48□□□□□ -1.69
CCDC38-204ENST00000546816 LYL1P12980 280 aa4.48□□□□□ -1.69
CCDC38-204ENST00000546816 GNLYP22749 145 aa4.48□□□□□ -1.69
CCDC38-204ENST00000546816 PDIA3P30101 505 aaKnown RBP4.48□□□□□ -1.69
CCDC38-204ENST00000546816 GLUD2P49448 558 aa4.48□□□□□ -1.69
CCDC38-204ENST00000546816 OAZ1P54368 228 aa4.48□□□□□ -1.69
CCDC38-204ENST00000546816 TMPRSS3P57727 454 aa4.48□□□□□ -1.69
CCDC38-204ENST00000546816 COASYQ13057 564 aa4.48□□□□□ -1.69
CCDC38-204ENST00000546816 HNF4GQ14541 408 aa4.48□□□□□ -1.69
CCDC38-204ENST00000546816 ZACNQ401N2 412 aa4.48□□□□□ -1.69
CCDC38-204ENST00000546816 C5orf22Q49AR2 442 aa4.48□□□□□ -1.69
CCDC38-204ENST00000546816 MAP9Q49MG5 647 aa4.48□□□□□ -1.69
CCDC38-204ENST00000546816 CCSAPQ6IQ19 270 aaPredicted RBP4.48□□□□□ -1.69
CCDC38-204ENST00000546816 LIN54Q6MZP7 749 aa4.48□□□□□ -1.69
CCDC38-204ENST00000546816 VPS52Q8N1B4 723 aa4.48□□□□□ -1.69
CCDC38-204ENST00000546816 C2CD4CQ8TF44 421 aa4.48□□□□□ -1.69
CCDC38-204ENST00000546816 ARRDC3Q96B67 414 aa4.48□□□□□ -1.69
CCDC38-204ENST00000546816 APOLD1Q96LR9 279 aa4.48□□□□□ -1.69
CCDC38-204ENST00000546816 PCGF6Q9BYE7 350 aa4.48□□□□□ -1.69
CCDC38-204ENST00000546816 SLC25A13Q9UJS0 675 aa4.48□□□□□ -1.69
CCDC38-204ENST00000546816 RAP2CQ9Y3L5 183 aa4.48□□□□□ -1.69
CCDC38-204ENST00000546816 DOCK7Q96N67 2140 aa4.48□□□□□ -1.69
CCDC38-204ENST00000546816 A0A0A0MQY5 61 aa4.47□□□□□ -1.69
CCDC38-204ENST00000546816 SYT5O00445 386 aa4.47□□□□□ -1.69
CCDC38-204ENST00000546816 LDB2O43679 373 aa4.47□□□□□ -1.69
CCDC38-204ENST00000546816 LIASO43766 372 aa4.47□□□□□ -1.69
CCDC38-204ENST00000546816 CGAP01215 116 aa4.47□□□□□ -1.69
CCDC38-204ENST00000546816 FCGR2AP12318 317 aa4.47□□□□□ -1.69
CCDC38-204ENST00000546816 PRKCHP24723 683 aa4.47□□□□□ -1.69
CCDC38-204ENST00000546816 SERPINF1P36955 418 aa4.47□□□□□ -1.69
CCDC38-204ENST00000546816 AVPR1AP37288 418 aa4.47□□□□□ -1.69
CCDC38-204ENST00000546816 AP2B1P63010 937 aa4.47□□□□□ -1.69
CCDC38-204ENST00000546816 DSC1Q08554 894 aa4.47□□□□□ -1.69
CCDC38-204ENST00000546816 FSCBQ5H9T9 825 aa4.47□□□□□ -1.69
CCDC38-204ENST00000546816 RAB11FIP2Q7L804 512 aa4.47□□□□□ -1.69
CCDC38-204ENST00000546816 SCN4BQ8IWT1 228 aa4.47□□□□□ -1.69
CCDC38-204ENST00000546816 CLIP4Q8N3C7 705 aa4.47□□□□□ -1.69
CCDC38-204ENST00000546816 HORMAD2Q8N7B1 307 aa4.47□□□□□ -1.69
CCDC38-204ENST00000546816 TRIM31Q9BZY9 425 aa4.47□□□□□ -1.69
CCDC38-204ENST00000546816 ELAC1Q9H777 363 aaKnown RBP4.47□□□□□ -1.69
CCDC38-204ENST00000546816 C19orf53Q9UNZ5 99 aaPredicted RBP4.47□□□□□ -1.69
CCDC38-204ENST00000546816 FAM90A20PA6NIJ5 464 aa4.46□□□□□ -1.7
CCDC38-204ENST00000546816 SOCS5O75159 536 aa4.46□□□□□ -1.7
CCDC38-204ENST00000546816 TMCC1O94876 653 aa4.46□□□□□ -1.7
CCDC38-204ENST00000546816 SOX30O94993 753 aa4.46□□□□□ -1.7
CCDC38-204ENST00000546816 ZBTB11O95625 1053 aaPredicted RBP4.46□□□□□ -1.7
CCDC38-204ENST00000546816 FCGR1AP12314 374 aa4.46□□□□□ -1.7
CCDC38-204ENST00000546816 KRTAP5-9P26371 169 aa4.46□□□□□ -1.7
CCDC38-204ENST00000546816 THPOP40225 353 aa4.46□□□□□ -1.7
CCDC38-204ENST00000546816 SEC61A1P61619 476 aaKnown RBP4.46□□□□□ -1.7
CCDC38-204ENST00000546816 POU5F1BQ06416 359 aa4.46□□□□□ -1.7
CCDC38-204ENST00000546816 TRAF3Q13114 568 aa4.46□□□□□ -1.7
CCDC38-204ENST00000546816 ALKBH1Q13686 389 aaKnown RBP4.46□□□□□ -1.7
CCDC38-204ENST00000546816 ZNF284Q2VY69 593 aa4.46□□□□□ -1.7
CCDC38-204ENST00000546816 SYTL3Q4VX76 610 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms