RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 PADI4Q9UM07 663 aa12.98□□□□□ -0.33
PTCH1-212ENST00000546744 PRELID1Q9Y255 219 aa12.98□□□□□ -0.33
PTCH1-212ENST00000546744 GMPPBQ9Y5P6 360 aa12.98□□□□□ -0.33
PTCH1-212ENST00000546744 ARFGEF2Q9Y6D5 1785 aa12.98□□□□□ -0.33
PTCH1-212ENST00000546744 GLP2RO95838 553 aa12.98□□□□□ -0.33
PTCH1-212ENST00000546744 HMGCRP04035 888 aa12.98□□□□□ -0.33
PTCH1-212ENST00000546744 SMAD1Q15797 465 aaKnown RBP12.98□□□□□ -0.33
PTCH1-212ENST00000546744 NT5DC4Q86YG4 428 aa12.98□□□□□ -0.33
PTCH1-212ENST00000546744 LRRC49Q8IUZ0 686 aa12.98□□□□□ -0.33
PTCH1-212ENST00000546744 SLC7A14Q8TBB6 771 aa12.98□□□□□ -0.33
PTCH1-212ENST00000546744 SLCO2A1Q92959 643 aa12.98□□□□□ -0.33
PTCH1-212ENST00000546744 PABPC5Q96DU9 382 aaKnown RBP12.98□□□□□ -0.33
PTCH1-212ENST00000546744 MRPL57Q9BQC6 102 aaKnown RBP12.98□□□□□ -0.33
PTCH1-212ENST00000546744 TINF2Q9BSI4 451 aa12.98□□□□□ -0.33
PTCH1-212ENST00000546744 ROGDIQ9GZN7 287 aa12.98□□□□□ -0.33
PTCH1-212ENST00000546744 C1orf21Q9H246 121 aa12.98□□□□□ -0.33
PTCH1-212ENST00000546744 RIBC2Q9H4K1 309 aa12.98□□□□□ -0.33
PTCH1-212ENST00000546744 PCDH18Q9HCL0 1135 aa12.98□□□□□ -0.33
PTCH1-212ENST00000546744 SMPD3Q9NY59 655 aaPredicted RBP12.98□□□□□ -0.33
PTCH1-212ENST00000546744 POLIQ9UNA4 740 aa12.98□□□□□ -0.33
PTCH1-212ENST00000546744 CLEC11AQ9Y240 323 aa12.98□□□□□ -0.33
PTCH1-212ENST00000546744 LRP6O75581 1613 aa12.98□□□□□ -0.33
PTCH1-212ENST00000546744 ASB14A6NK59 587 aa12.98□□□□□ -0.33
PTCH1-212ENST00000546744 A8MUI8 341 aa12.98□□□□□ -0.33
PTCH1-212ENST00000546744 UGT2B11O75310 529 aa12.98□□□□□ -0.33
PTCH1-212ENST00000546744 MTA2O94776 668 aa12.98□□□□□ -0.33
PTCH1-212ENST00000546744 FGFR2P21802 821 aa12.98□□□□□ -0.33
PTCH1-212ENST00000546744 AKAP5P24588 427 aa12.98□□□□□ -0.33
PTCH1-212ENST00000546744 KRT33BQ14525 404 aa12.98□□□□□ -0.33
PTCH1-212ENST00000546744 PHKG1Q16816 387 aa12.98□□□□□ -0.33
PTCH1-212ENST00000546744 HGSNATQ68CP4 663 aa12.98□□□□□ -0.33
PTCH1-212ENST00000546744 DRICH1Q6PGQ1 229 aaPredicted RBP12.98□□□□□ -0.33
PTCH1-212ENST00000546744 ZCCHC23Q6ZST2 131 aa12.98□□□□□ -0.33
PTCH1-212ENST00000546744 ANKS1BQ7Z6G8 1248 aa12.98□□□□□ -0.33
PTCH1-212ENST00000546744 OR2T34Q8NGX1 318 aa12.98□□□□□ -0.33
PTCH1-212ENST00000546744 OR2T3Q8NH03 318 aa12.98□□□□□ -0.33
PTCH1-212ENST00000546744 TOP1MTQ969P6 601 aa12.98□□□□□ -0.33
PTCH1-212ENST00000546744 GMCL1Q96IK5 515 aa12.98□□□□□ -0.33
PTCH1-212ENST00000546744 SPATA17Q96L03 361 aa12.98□□□□□ -0.33
PTCH1-212ENST00000546744 CYP4F12Q9HCS2 524 aa12.98□□□□□ -0.33
PTCH1-212ENST00000546744 SIPA1L3O60292 1781 aaPredicted RBP12.98□□□□□ -0.33
PTCH1-212ENST00000546744 A0A0A0MRY4 1105 aa12.97□□□□□ -0.33
PTCH1-212ENST00000546744 BTN3A3O00478 584 aa12.97□□□□□ -0.33
PTCH1-212ENST00000546744 SYNCRIPO60506 623 aaKnown RBP12.97□□□□□ -0.33
PTCH1-212ENST00000546744 ASLP04424 464 aa12.97□□□□□ -0.33
PTCH1-212ENST00000546744 SSTR3P32745 418 aaPredicted RBP12.97□□□□□ -0.33
PTCH1-212ENST00000546744 CYP1B1Q16678 543 aa12.97□□□□□ -0.33
PTCH1-212ENST00000546744 SPOUT1Q5T280 376 aaKnown RBP12.97□□□□□ -0.33
PTCH1-212ENST00000546744 KIAA1841Q6NSI8 718 aa12.97□□□□□ -0.33
PTCH1-212ENST00000546744 UTP15Q8TED0 518 aaKnown RBP12.97□□□□□ -0.33
PTCH1-212ENST00000546744 RCN3Q96D15 328 aa12.97□□□□□ -0.33
PTCH1-212ENST00000546744 CERS2Q96G23 380 aa12.97□□□□□ -0.33
PTCH1-212ENST00000546744 SPATA13Q96N96 652 aa12.97□□□□□ -0.33
PTCH1-212ENST00000546744 ACE2Q9BYF1 805 aaPredicted RBP12.97□□□□□ -0.33
PTCH1-212ENST00000546744 UBQLN1Q9UMX0 589 aaKnown RBP12.97□□□□□ -0.33
PTCH1-212ENST00000546744 SIGLEC16A6NMB1 481 aa12.97□□□□□ -0.33
PTCH1-212ENST00000546744 CHKAP35790 457 aa12.97□□□□□ -0.33
PTCH1-212ENST00000546744 NAGLUP54802 743 aa12.97□□□□□ -0.33
PTCH1-212ENST00000546744 PRKG2Q13237 762 aa12.97□□□□□ -0.33
PTCH1-212ENST00000546744 ADGRE1Q14246 886 aa12.97□□□□□ -0.33
PTCH1-212ENST00000546744 ZBED5Q49AG3 693 aa12.97□□□□□ -0.33
PTCH1-212ENST00000546744 SULF1Q8IWU6 871 aa12.97□□□□□ -0.33
PTCH1-212ENST00000546744 MASTLQ96GX5 879 aa12.97□□□□□ -0.33
PTCH1-212ENST00000546744 TMEM176AQ96HP8 235 aa12.97□□□□□ -0.33
PTCH1-212ENST00000546744 AKAP7Q9P0M2 348 aaPredicted RBP12.97□□□□□ -0.33
PTCH1-212ENST00000546744 TCRBV5S4A2TA0A5A2 114 aa12.97□□□□□ -0.33
PTCH1-212ENST00000546744 E2F8A0AVK6 867 aa12.97□□□□□ -0.33
PTCH1-212ENST00000546744 GSAPA4D1B5 854 aa12.97□□□□□ -0.33
PTCH1-212ENST00000546744 TPP1O14773 563 aa12.97□□□□□ -0.33
PTCH1-212ENST00000546744 HBP1O60381 514 aa12.97□□□□□ -0.33
PTCH1-212ENST00000546744 MOCS2O96007 188 aaPredicted RBP12.97□□□□□ -0.33
PTCH1-212ENST00000546744 TSPAN19P0C672 248 aa12.97□□□□□ -0.33
PTCH1-212ENST00000546744 IDO1P14902 403 aa12.97□□□□□ -0.33
PTCH1-212ENST00000546744 ITGA2P17301 1181 aa12.97□□□□□ -0.33
PTCH1-212ENST00000546744 ETFBP38117 255 aa12.97□□□□□ -0.33
PTCH1-212ENST00000546744 CLCN5P51795 746 aa12.97□□□□□ -0.33
PTCH1-212ENST00000546744 TRIM32Q13049 653 aa12.97□□□□□ -0.33
PTCH1-212ENST00000546744 GALNTL6Q49A17 601 aa12.97□□□□□ -0.33
PTCH1-212ENST00000546744 ACSBG2Q5FVE4 666 aa12.97□□□□□ -0.33
PTCH1-212ENST00000546744 NIPAL1Q6NVV3 410 aa12.97□□□□□ -0.33
PTCH1-212ENST00000546744 C11orf88Q6PI97 169 aa12.97□□□□□ -0.33
PTCH1-212ENST00000546744 ZPBP2Q6X784 338 aa12.97□□□□□ -0.33
PTCH1-212ENST00000546744 FAM92BQ6ZTR7 304 aa12.97□□□□□ -0.33
PTCH1-212ENST00000546744 ADGRG6Q86SQ4 1221 aa12.97□□□□□ -0.33
PTCH1-212ENST00000546744 SP8Q8IXZ3 490 aa12.97□□□□□ -0.33
PTCH1-212ENST00000546744 PCDH20Q8N6Y1 951 aaKnown RBP12.97□□□□□ -0.33
PTCH1-212ENST00000546744 ZNF420Q8TAQ5 688 aaPredicted RBP12.97□□□□□ -0.33
PTCH1-212ENST00000546744 URGCPQ8TCY9 931 aa12.97□□□□□ -0.33
PTCH1-212ENST00000546744 CENPNQ96H22 339 aaPredicted RBP12.97□□□□□ -0.33
PTCH1-212ENST00000546744 UNC93B1Q9H1C4 597 aa12.97□□□□□ -0.33
PTCH1-212ENST00000546744 DBNDD1Q9H9R9 158 aa12.97□□□□□ -0.33
PTCH1-212ENST00000546744 TAS2R13Q9NYV9 303 aa12.97□□□□□ -0.33
PTCH1-212ENST00000546744 SYNPO2Q9UMS6 1093 aa12.97□□□□□ -0.33
PTCH1-212ENST00000546744 CORO2BQ9UQ03 480 aa12.97□□□□□ -0.33
PTCH1-212ENST00000546744 TELO2Q9Y4R8 837 aa12.97□□□□□ -0.33
PTCH1-212ENST00000546744 ADAMTS7Q9UKP4 1686 aa12.97□□□□□ -0.33
PTCH1-212ENST00000546744 H3BMM5 538 aa12.97□□□□□ -0.33
PTCH1-212ENST00000546744 DDX3YO15523 660 aaKnown RBP12.97□□□□□ -0.33
PTCH1-212ENST00000546744 TMCC2O75069 709 aa12.97□□□□□ -0.33
PTCH1-212ENST00000546744 GRAP2O75791 330 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms