RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 EIF2S1P05198 315 aaKnown RBP8.74□□□□□ -1.01
CLIP1-218ENST00000545889 TRPC1P48995 793 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 ZACNQ401N2 412 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 ALKBH2Q6NS38 261 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 DENND1BQ6P3S1 775 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 TMC5Q6UXY8 1006 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 DEFB106AQ8N104 65 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 TDRD5Q8NAT2 981 aaKnown RBP8.74□□□□□ -1.01
CLIP1-218ENST00000545889 SPPL2BQ8TCT7 592 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 OR8D1Q8WZ84 308 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 SERAC1Q96JX3 654 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 TSPAN18Q96SJ8 248 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 TCF25Q9BQ70 676 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 CACNG4Q9UBN1 327 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 RNF112Q9ULX5 631 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 SUPT7LO94864 414 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 GLI1P08151 1106 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 OR56A5P0C7T3 313 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 MYL2P10916 166 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 GNSP15586 552 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 ITGB6P18564 788 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 TBL3Q12788 808 aaKnown RBP8.74□□□□□ -1.01
CLIP1-218ENST00000545889 DUSP4Q13115 394 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 RAET1GQ6H3X3 334 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 KLHL35Q6PF15 583 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 SYDE1Q6ZW31 735 aaPredicted RBP8.74□□□□□ -1.01
CLIP1-218ENST00000545889 CLYBLQ8N0X4 340 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 NUP93Q8N1F7 819 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 ZNF655Q8N720 491 aaPredicted RBP8.74□□□□□ -1.01
CLIP1-218ENST00000545889 PIP4K2CQ8TBX8 421 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 SHDQ96IW2 340 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 CEP19Q96LK0 163 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 FRMD8Q9BZ67 464 aaPredicted RBP8.74□□□□□ -1.01
CLIP1-218ENST00000545889 ZFYVE1Q9HBF4 777 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 ZFP14Q9HCL3 533 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 PDP2Q9P2J9 529 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 DRG1Q9Y295 367 aaKnown RBP8.74□□□□□ -1.01
CLIP1-218ENST00000545889 USP15Q9Y4E8 981 aaPredicted RBP8.74□□□□□ -1.01
CLIP1-218ENST00000545889 NCF1BA6NI72 391 aaPredicted RBP8.74□□□□□ -1.01
CLIP1-218ENST00000545889 NCF1CA8MVU1 366 aaPredicted RBP8.74□□□□□ -1.01
CLIP1-218ENST00000545889 CCL16O15467 120 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 SPAG6O75602 509 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 TMEM253P0C7T8 217 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 NCF1P14598 390 aaPredicted RBP8.74□□□□□ -1.01
CLIP1-218ENST00000545889 ZNF24P17028 368 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 NAT1P18440 290 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 UAP1L1Q3KQV9 507 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 AGAP9Q5VTM2 703 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 SLC39A4Q6P5W5 647 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 DENND1CQ8IV53 801 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 HDDC3Q8N4P3 179 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 OLFM3Q96PB7 478 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 ST6GALNAC4Q9H4F1 302 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 POLMQ9NP87 494 aaPredicted RBP8.74□□□□□ -1.01
CLIP1-218ENST00000545889 GTF2IRD1Q9UHL9 959 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 GGA2Q9UJY4 613 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 INSL6Q9Y581 213 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 MRPL42Q9Y6G3 142 aaKnown RBP8.74□□□□□ -1.01
CLIP1-218ENST00000545889 LRRC14BA6NHZ5 514 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 TLR5O60602 858 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 HSPA1AP0DMV8 641 aaKnown RBP8.74□□□□□ -1.01
CLIP1-218ENST00000545889 HSPA1BP0DMV9 641 aaKnown RBP8.74□□□□□ -1.01
CLIP1-218ENST00000545889 PCNAP12004 261 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 RARGP13631 454 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 ARFIP2P53365 341 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 ALDH18A1P54886 795 aaKnown RBP8.74□□□□□ -1.01
CLIP1-218ENST00000545889 PRUNE1Q86TP1 453 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 NRSN1Q8IZ57 195 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 HJURPQ8NCD3 748 aaPredicted RBP8.74□□□□□ -1.01
CLIP1-218ENST00000545889 MFSD14AQ96MC6 490 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 IL12RB2Q99665 862 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 CCDC90BQ9GZT6 254 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 ELOVL6Q9H5J4 265 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 ZNF556Q9HAH1 456 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 ALG13Q9NP73 1137 aaKnown RBP8.74□□□□□ -1.01
CLIP1-218ENST00000545889 PALMDQ9NP74 551 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 NCDNQ9UBB6 729 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 TUBGCP4Q9UGJ1 667 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 GJD2Q9UKL4 321 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 CDH9Q9ULB4 789 aa8.74□□□□□ -1.01
CLIP1-218ENST00000545889 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.74□□□□□ -1.01
CLIP1-218ENST00000545889 DCTN3O75935 186 aa8.73□□□□□ -1.01
CLIP1-218ENST00000545889 IFNA16P05015 189 aa8.73□□□□□ -1.01
CLIP1-218ENST00000545889 CYP2A7P20853 494 aa8.73□□□□□ -1.01
CLIP1-218ENST00000545889 HSD17B3P37058 310 aa8.73□□□□□ -1.01
CLIP1-218ENST00000545889 MAPK8P45983 427 aa8.73□□□□□ -1.01
CLIP1-218ENST00000545889 BRCC3P46736 316 aa8.73□□□□□ -1.01
CLIP1-218ENST00000545889 ALDH9A1P49189 494 aa8.73□□□□□ -1.01
CLIP1-218ENST00000545889 GALK1P51570 392 aa8.73□□□□□ -1.01
CLIP1-218ENST00000545889 ERVK-21P61565 698 aa8.73□□□□□ -1.01
CLIP1-218ENST00000545889 HSP90AA5PQ58FG0 334 aa8.73□□□□□ -1.01
CLIP1-218ENST00000545889 ANO7Q6IWH7 933 aa8.73□□□□□ -1.01
CLIP1-218ENST00000545889 LRRC8EQ6NSJ5 796 aa8.73□□□□□ -1.01
CLIP1-218ENST00000545889 SETD3Q86TU7 594 aaPredicted RBP8.73□□□□□ -1.01
CLIP1-218ENST00000545889 ZNF606Q8WXB4 792 aa8.73□□□□□ -1.01
CLIP1-218ENST00000545889 MED8Q96G25 268 aa8.73□□□□□ -1.01
CLIP1-218ENST00000545889 CATSPER2Q96P56 530 aa8.73□□□□□ -1.01
CLIP1-218ENST00000545889 GANQ9H2C0 597 aa8.73□□□□□ -1.01
CLIP1-218ENST00000545889 RHBGQ9H310 441 aa8.73□□□□□ -1.01
CLIP1-218ENST00000545889 FZD8Q9H461 694 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms