RNA–Protein interactions for RNA: ENST00000545210.5

TMEM258-208, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-208ENST00000545210 FAM117AQ9C073 453 aa11.8□□□□□ -0.52
TMEM258-208ENST00000545210 IL17BQ9UHF5 180 aa11.8□□□□□ -0.52
TMEM258-208ENST00000545210 ZFR2Q9UPR6 939 aaKnown RBP11.8□□□□□ -0.52
TMEM258-208ENST00000545210 HEMK1Q9Y5R4 338 aaPredicted RBP11.8□□□□□ -0.52
TMEM258-208ENST00000545210 FLNCQ14315 2725 aa11.8□□□□□ -0.52
TMEM258-208ENST00000545210 A6NNZ2 444 aa11.79□□□□□ -0.52
TMEM258-208ENST00000545210 RNF103O00237 685 aa11.79□□□□□ -0.52
TMEM258-208ENST00000545210 CASC3O15234 703 aaKnown RBP11.79□□□□□ -0.52
TMEM258-208ENST00000545210 PCDH8O95206 1070 aa11.79□□□□□ -0.52
TMEM258-208ENST00000545210 TRUB2O95900 331 aaKnown RBP11.79□□□□□ -0.52
TMEM258-208ENST00000545210 SYKP43405 635 aa11.79□□□□□ -0.52
TMEM258-208ENST00000545210 VASPP50552 380 aaPredicted RBP11.79□□□□□ -0.52
TMEM258-208ENST00000545210 IRAK1P51617 712 aa11.79□□□□□ -0.52
TMEM258-208ENST00000545210 NDUFA8P51970 172 aa11.79□□□□□ -0.52
TMEM258-208ENST00000545210 OXCT1P55809 520 aa11.79□□□□□ -0.52
TMEM258-208ENST00000545210 HNRNPKP61978 463 aaKnown RBP eCLIP11.79□□□□□ -0.52
TMEM258-208ENST00000545210 CLN3Q13286 438 aa11.79□□□□□ -0.52
TMEM258-208ENST00000545210 STILQ15468 1287 aa11.79□□□□□ -0.52
TMEM258-208ENST00000545210 ARL13BQ3SXY8 428 aa11.79□□□□□ -0.52
TMEM258-208ENST00000545210 RABGAP1LQ5R372 815 aa11.79□□□□□ -0.52
TMEM258-208ENST00000545210 TTC39BQ5VTQ0 682 aaPredicted RBP11.79□□□□□ -0.52
TMEM258-208ENST00000545210 SEL1L3Q68CR1 1132 aa11.79□□□□□ -0.52
TMEM258-208ENST00000545210 RBM44Q6ZP01 1051 aaKnown RBP11.79□□□□□ -0.52
TMEM258-208ENST00000545210 EFL1Q7Z2Z2 1120 aaKnown RBP11.79□□□□□ -0.52
TMEM258-208ENST00000545210 SH2D3CQ8N5H7 860 aa11.79□□□□□ -0.52
TMEM258-208ENST00000545210 ATP6V0D2Q8N8Y2 350 aa11.79□□□□□ -0.52
TMEM258-208ENST00000545210 ZNF548Q8NEK5 533 aaPredicted RBP11.79□□□□□ -0.52
TMEM258-208ENST00000545210 KAT5Q92993 513 aa11.79□□□□□ -0.52
TMEM258-208ENST00000545210 RNF34Q969K3 372 aa11.79□□□□□ -0.52
TMEM258-208ENST00000545210 IFT43Q96FT9 208 aa11.79□□□□□ -0.52
TMEM258-208ENST00000545210 WDR70Q9NW82 654 aa11.79□□□□□ -0.52
TMEM258-208ENST00000545210 VPS28Q9UK41 221 aa11.79□□□□□ -0.52
TMEM258-208ENST00000545210 PCDHGA8Q9Y5G5 932 aa11.79□□□□□ -0.52
TMEM258-208ENST00000545210 SYNJ2BP-COX16A0A087WUM0 186 aa11.78□□□□□ -0.52
TMEM258-208ENST00000545210 POM121BA6NF01 834 aa11.78□□□□□ -0.52
TMEM258-208ENST00000545210 SART1O43290 800 aaKnown RBP11.78□□□□□ -0.52
TMEM258-208ENST00000545210 TNFSF15O95150 251 aa11.78□□□□□ -0.52
TMEM258-208ENST00000545210 MT-CO1P00395 513 aa11.78□□□□□ -0.52
TMEM258-208ENST00000545210 IGLV3-25P01717 112 aa11.78□□□□□ -0.52
TMEM258-208ENST00000545210 CHRNA3P32297 505 aa11.78□□□□□ -0.52
TMEM258-208ENST00000545210 GPD2P43304 727 aa11.78□□□□□ -0.52
TMEM258-208ENST00000545210 YWHAZP63104 245 aaKnown RBP11.78□□□□□ -0.52
TMEM258-208ENST00000545210 SRSF1Q07955 248 aaKnown RBP eCLIP11.78□□□□□ -0.52
TMEM258-208ENST00000545210 PKP1Q13835 747 aa11.78□□□□□ -0.52
TMEM258-208ENST00000545210 FZD2Q14332 565 aa11.78□□□□□ -0.52
TMEM258-208ENST00000545210 DRAP1Q14919 205 aaPredicted RBP11.78□□□□□ -0.52
TMEM258-208ENST00000545210 DEFB133Q30KQ1 61 aa11.78□□□□□ -0.52
TMEM258-208ENST00000545210 C6orf132Q5T0Z8 1188 aa11.78□□□□□ -0.52
TMEM258-208ENST00000545210 FBXL22Q6P050 247 aa11.78□□□□□ -0.52
TMEM258-208ENST00000545210 BEND5Q7L4P6 421 aa11.78□□□□□ -0.52
TMEM258-208ENST00000545210 DCP2Q8IU60 420 aaKnown RBP11.78□□□□□ -0.52
TMEM258-208ENST00000545210 PPM1KQ8N3J5 372 aa11.78□□□□□ -0.52
TMEM258-208ENST00000545210 ARL14Q8N4G2 192 aa11.78□□□□□ -0.52
TMEM258-208ENST00000545210 OR2A12Q8NGT7 310 aa11.78□□□□□ -0.52
TMEM258-208ENST00000545210 SLC35C1Q96A29 364 aa11.78□□□□□ -0.52
TMEM258-208ENST00000545210 GRAMD1AQ96CP6 724 aa11.78□□□□□ -0.52
TMEM258-208ENST00000545210 BMFQ96LC9 184 aa11.78□□□□□ -0.52
TMEM258-208ENST00000545210 RPRD1AQ96P16 312 aaPredicted RBP11.78□□□□□ -0.52
TMEM258-208ENST00000545210 CCNL2Q96S94 520 aaPredicted RBP11.78□□□□□ -0.52
TMEM258-208ENST00000545210 PPP1R9BQ96SB3 815 aa11.78□□□□□ -0.52
TMEM258-208ENST00000545210 TRIM62Q9BVG3 475 aa11.78□□□□□ -0.52
TMEM258-208ENST00000545210 POPDC2Q9HBU9 364 aa11.78□□□□□ -0.52
TMEM258-208ENST00000545210 DYRK4Q9NR20 520 aa11.78□□□□□ -0.52
TMEM258-208ENST00000545210 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.78□□□□□ -0.52
TMEM258-208ENST00000545210 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.78□□□□□ -0.52
TMEM258-208ENST00000545210 COX16Q9P0S2 106 aa11.78□□□□□ -0.52
TMEM258-208ENST00000545210 SLC12A6Q9UHW9 1150 aa11.78□□□□□ -0.52
TMEM258-208ENST00000545210 KLF15Q9UIH9 416 aa11.78□□□□□ -0.52
TMEM258-208ENST00000545210 FARP1Q9Y4F1 1045 aaPredicted RBP11.78□□□□□ -0.52
TMEM258-208ENST00000545210 OR51B4Q9Y5P0 310 aa11.78□□□□□ -0.52
TMEM258-208ENST00000545210 CHD5Q8TDI0 1954 aa11.78□□□□□ -0.52
TMEM258-208ENST00000545210 SPTY2D1-AS1A0A0U1RR47 76 aa11.77□□□□□ -0.53
TMEM258-208ENST00000545210 K7ERQ8 282 aa11.77□□□□□ -0.53
TMEM258-208ENST00000545210 MUSKO15146 869 aa11.77□□□□□ -0.53
TMEM258-208ENST00000545210 SLC16A3O15427 465 aaKnown RBP11.77□□□□□ -0.53
TMEM258-208ENST00000545210 EFSO43281 561 aa11.77□□□□□ -0.53
TMEM258-208ENST00000545210 AQP9O43315 295 aa11.77□□□□□ -0.53
TMEM258-208ENST00000545210 CSF2P04141 144 aa11.77□□□□□ -0.53
TMEM258-208ENST00000545210 SRCP12931 536 aa11.77□□□□□ -0.53
TMEM258-208ENST00000545210 NME1P15531 152 aaKnown RBP11.77□□□□□ -0.53
TMEM258-208ENST00000545210 RPL34P49207 117 aaKnown RBP11.77□□□□□ -0.53
TMEM258-208ENST00000545210 NFKB2Q00653 900 aa11.77□□□□□ -0.53
TMEM258-208ENST00000545210 CCDC15Q0P6D6 951 aa11.77□□□□□ -0.53
TMEM258-208ENST00000545210 MAPK8IP2Q13387 824 aaPredicted RBP11.77□□□□□ -0.53
TMEM258-208ENST00000545210 EIF4EBP2Q13542 120 aaPredicted RBP11.77□□□□□ -0.53
TMEM258-208ENST00000545210 TAF5Q15542 800 aa11.77□□□□□ -0.53
TMEM258-208ENST00000545210 LINC00303Q3SY05 128 aa11.77□□□□□ -0.53
TMEM258-208ENST00000545210 TMEM259Q4ZIN3 620 aa11.77□□□□□ -0.53
TMEM258-208ENST00000545210 PERM1Q5SV97 790 aa11.77□□□□□ -0.53
TMEM258-208ENST00000545210 DENND1BQ6P3S1 775 aa11.77□□□□□ -0.53
TMEM258-208ENST00000545210 KRBA2Q6ZNG9 492 aa11.77□□□□□ -0.53
TMEM258-208ENST00000545210 CLEC14AQ86T13 490 aa11.77□□□□□ -0.53
TMEM258-208ENST00000545210 PARGQ86W56 976 aa11.77□□□□□ -0.53
TMEM258-208ENST00000545210 ATP11CQ8NB49 1132 aa11.77□□□□□ -0.53
TMEM258-208ENST00000545210 TMIEQ8NEW7 156 aa11.77□□□□□ -0.53
TMEM258-208ENST00000545210 WDR36Q8NI36 951 aaKnown RBP11.77□□□□□ -0.53
TMEM258-208ENST00000545210 GRIN3AQ8TCU5 1115 aa11.77□□□□□ -0.53
TMEM258-208ENST00000545210 NT5C1BQ96P26 610 aa11.77□□□□□ -0.53
TMEM258-208ENST00000545210 MUC3BQ9H195 1237 aa11.77□□□□□ -0.53
TMEM258-208ENST00000545210 FAM204AQ9H8W3 233 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms