RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 ZDHHC7Q9NXF8 308 aa15.29■□□□□ 0.04
CHFR-223ENST00000544268 NDE1Q9NXR1 346 aa15.29■□□□□ 0.04
CHFR-223ENST00000544268 LYPLA1O75608 230 aaPredicted RBP15.29■□□□□ 0.04
CHFR-223ENST00000544268 HNRNPCP07910 306 aaKnown RBP eCLIP15.29■□□□□ 0.04
CHFR-223ENST00000544268 ESRRAP11474 423 aaPredicted RBP15.29■□□□□ 0.04
CHFR-223ENST00000544268 ODC1P11926 461 aa15.29■□□□□ 0.04
CHFR-223ENST00000544268 ABCG1P45844 678 aa15.29■□□□□ 0.04
CHFR-223ENST00000544268 GATMP50440 423 aa15.29■□□□□ 0.04
CHFR-223ENST00000544268 AP2B1P63010 937 aa15.29■□□□□ 0.04
CHFR-223ENST00000544268 ZBTB16Q05516 673 aa15.29■□□□□ 0.04
CHFR-223ENST00000544268 DCLRE1AQ6PJP8 1040 aa15.29■□□□□ 0.04
CHFR-223ENST00000544268 SLC26A9Q7LBE3 791 aa15.29■□□□□ 0.04
CHFR-223ENST00000544268 ARID3BQ8IVW6 561 aaPredicted RBP15.29■□□□□ 0.04
CHFR-223ENST00000544268 DEPDC1BQ8WUY9 529 aa15.29■□□□□ 0.04
CHFR-223ENST00000544268 RSPH1Q8WYR4 309 aa15.29■□□□□ 0.04
CHFR-223ENST00000544268 CENPIQ92674 756 aaPredicted RBP15.29■□□□□ 0.04
CHFR-223ENST00000544268 HNRNPABQ99729 332 aaKnown RBP15.29■□□□□ 0.04
CHFR-223ENST00000544268 RTP3Q9BQQ7 232 aa15.29■□□□□ 0.04
CHFR-223ENST00000544268 PAIP2BQ9ULR5 123 aaKnown RBP15.29■□□□□ 0.04
CHFR-223ENST00000544268 TANC1Q9C0D5 1861 aa15.29■□□□□ 0.04
CHFR-223ENST00000544268 TTC3P53804 2025 aa15.29■□□□□ 0.04
CHFR-223ENST00000544268 MYBPHLA2RUH7 354 aa15.28■□□□□ 0.04
CHFR-223ENST00000544268 KCNK1O00180 336 aa15.28■□□□□ 0.04
CHFR-223ENST00000544268 HSPA1AP0DMV8 641 aaKnown RBP15.28■□□□□ 0.04
CHFR-223ENST00000544268 HSPA1BP0DMV9 641 aaKnown RBP15.28■□□□□ 0.04
CHFR-223ENST00000544268 MGAT1P26572 445 aa15.28■□□□□ 0.04
CHFR-223ENST00000544268 GRIA2P42262 883 aa15.28■□□□□ 0.04
CHFR-223ENST00000544268 SULT1E1P49888 294 aa15.28■□□□□ 0.04
CHFR-223ENST00000544268 LBX1P52954 281 aa15.28■□□□□ 0.04
CHFR-223ENST00000544268 PGGT1BP53609 377 aa15.28■□□□□ 0.04
CHFR-223ENST00000544268 ADARP55265 1226 aaKnown RBP15.28■□□□□ 0.04
CHFR-223ENST00000544268 TMPRSS15P98073 1019 aa15.28■□□□□ 0.04
CHFR-223ENST00000544268 HEATR6Q6AI08 1181 aaKnown RBP15.28■□□□□ 0.04
CHFR-223ENST00000544268 NET1Q7Z628 596 aaPredicted RBP15.28■□□□□ 0.04
CHFR-223ENST00000544268 DEFB128Q7Z7B8 93 aa15.28■□□□□ 0.04
CHFR-223ENST00000544268 CHSY1Q86X52 802 aa15.28■□□□□ 0.04
CHFR-223ENST00000544268 TREML1Q86YW5 311 aa15.28■□□□□ 0.04
CHFR-223ENST00000544268 COLGALT2Q8IYK4 626 aa15.28■□□□□ 0.04
CHFR-223ENST00000544268 ARMC5Q96C12 935 aa15.28■□□□□ 0.04
CHFR-223ENST00000544268 ATXN7L3BQ96GX2 97 aa15.28■□□□□ 0.04
CHFR-223ENST00000544268 TOX2Q96NM4 488 aa15.28■□□□□ 0.04
CHFR-223ENST00000544268 EBF4Q9BQW3 602 aa15.28■□□□□ 0.04
CHFR-223ENST00000544268 PNPLA8Q9NP80 782 aa15.28■□□□□ 0.04
CHFR-223ENST00000544268 ARHGEF4Q9NR80 690 aa15.28■□□□□ 0.04
CHFR-223ENST00000544268 TMEM30AQ9NV96 361 aa15.28■□□□□ 0.04
CHFR-223ENST00000544268 CLIC5Q9NZA1 410 aa15.28■□□□□ 0.04
CHFR-223ENST00000544268 ATP11BQ9Y2G3 1177 aa15.28■□□□□ 0.04
CHFR-223ENST00000544268 SH3GLB1Q9Y371 365 aa15.28■□□□□ 0.04
CHFR-223ENST00000544268 PCDHB7Q9Y5E2 793 aa15.28■□□□□ 0.04
CHFR-223ENST00000544268 SNX10Q9Y5X0 201 aa15.28■□□□□ 0.04
CHFR-223ENST00000544268 TSC2P49815 1807 aa15.28■□□□□ 0.04
CHFR-223ENST00000544268 M0QZQ0 153 aa15.28■□□□□ 0.04
CHFR-223ENST00000544268 CDK16Q00536 496 aa15.28■□□□□ 0.04
CHFR-223ENST00000544268 PPM1JQ5JR12 505 aa15.28■□□□□ 0.04
CHFR-223ENST00000544268 B3GNT6Q6ZMB0 384 aa15.28■□□□□ 0.04
CHFR-223ENST00000544268 SATL1Q86VE3 508 aa15.28■□□□□ 0.04
CHFR-223ENST00000544268 SMYD1Q8NB12 490 aa15.28■□□□□ 0.04
CHFR-223ENST00000544268 HTR3CQ8WXA8 447 aa15.28■□□□□ 0.04
CHFR-223ENST00000544268 APBB2Q92870 758 aa15.28■□□□□ 0.04
CHFR-223ENST00000544268 QKIQ96PU8 341 aaKnown RBP eCLIP15.28■□□□□ 0.04
CHFR-223ENST00000544268 NACA2Q9H009 215 aa15.28■□□□□ 0.04
CHFR-223ENST00000544268 EBF3Q9H4W6 596 aa15.28■□□□□ 0.04
CHFR-223ENST00000544268 ELAC1Q9H777 363 aaKnown RBP15.28■□□□□ 0.04
CHFR-223ENST00000544268 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.27■□□□□ 0.04
CHFR-223ENST00000544268 FAM159BA6NKW6 160 aa15.27■□□□□ 0.04
CHFR-223ENST00000544268 FCHO1O14526 889 aa15.27■□□□□ 0.04
CHFR-223ENST00000544268 GCATO75600 419 aa15.27■□□□□ 0.04
CHFR-223ENST00000544268 KRT37O76014 449 aa15.27■□□□□ 0.04
CHFR-223ENST00000544268 TSHRP16473 764 aa15.27■□□□□ 0.04
CHFR-223ENST00000544268 PSMB4P28070 264 aa15.27■□□□□ 0.04
CHFR-223ENST00000544268 PTPN9P43378 593 aa15.27■□□□□ 0.04
CHFR-223ENST00000544268 MED21Q13503 144 aa15.27■□□□□ 0.04
CHFR-223ENST00000544268 CYLC2Q14093 348 aaPredicted RBP15.27■□□□□ 0.04
CHFR-223ENST00000544268 TRMT5Q32P41 509 aaKnown RBP15.27■□□□□ 0.04
CHFR-223ENST00000544268 CDKL3Q8IVW4 592 aaPredicted RBP15.27■□□□□ 0.04
CHFR-223ENST00000544268 SPNS2Q8IVW8 549 aa15.27■□□□□ 0.04
CHFR-223ENST00000544268 COLGALT1Q8NBJ5 622 aa15.27■□□□□ 0.04
CHFR-223ENST00000544268 CCNYQ8ND76 341 aa15.27■□□□□ 0.04
CHFR-223ENST00000544268 GSDMBQ8TAX9 411 aa15.27■□□□□ 0.04
CHFR-223ENST00000544268 PIP4K2CQ8TBX8 421 aa15.27■□□□□ 0.04
CHFR-223ENST00000544268 MED10Q9BTT4 135 aa15.27■□□□□ 0.04
CHFR-223ENST00000544268 DUSP16Q9BY84 665 aa15.27■□□□□ 0.04
CHFR-223ENST00000544268 RHOBTB2Q9BYZ6 727 aa15.27■□□□□ 0.04
CHFR-223ENST00000544268 ZNF358Q9NW07 568 aa15.27■□□□□ 0.04
CHFR-223ENST00000544268 NRP1O14786 923 aa15.27■□□□□ 0.03
CHFR-223ENST00000544268 ITM2AO43736 263 aa15.27■□□□□ 0.03
CHFR-223ENST00000544268 CXCL10P02778 98 aa15.27■□□□□ 0.03
CHFR-223ENST00000544268 CYP11A1P05108 521 aa15.27■□□□□ 0.03
CHFR-223ENST00000544268 MAGEA6P43360 314 aa15.27■□□□□ 0.03
CHFR-223ENST00000544268 OR1G1P47890 313 aa15.27■□□□□ 0.03
CHFR-223ENST00000544268 PHEXP78562 749 aa15.27■□□□□ 0.03
CHFR-223ENST00000544268 TMED1Q13445 227 aa15.27■□□□□ 0.03
CHFR-223ENST00000544268 TEX44Q53QW1 395 aa15.27■□□□□ 0.03
CHFR-223ENST00000544268 C6orf163Q5TEZ5 329 aa15.27■□□□□ 0.03
CHFR-223ENST00000544268 C1orf53Q5VUE5 145 aa15.27■□□□□ 0.03
CHFR-223ENST00000544268 GPRIN1Q7Z2K8 1008 aa15.27■□□□□ 0.03
CHFR-223ENST00000544268 ABI1Q8IZP0 508 aa15.27■□□□□ 0.03
CHFR-223ENST00000544268 MOCOSQ96EN8 888 aa15.27■□□□□ 0.03
CHFR-223ENST00000544268 P2RY11Q96G91 374 aa15.27■□□□□ 0.03
CHFR-223ENST00000544268 PCED1BQ96HM7 432 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms