RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 UTP6Q9NYH9 597 aaKnown RBP13.97□□□□□ -0.17
VPS33A-208ENST00000543633 NR2E3Q9Y5X4 410 aa13.97□□□□□ -0.17
VPS33A-208ENST00000543633 AP4B1Q9Y6B7 739 aa13.97□□□□□ -0.17
VPS33A-208ENST00000543633 F5H423 210 aaPredicted RBP13.97□□□□□ -0.17
VPS33A-208ENST00000543633 PPEF2O14830 753 aa13.97□□□□□ -0.17
VPS33A-208ENST00000543633 AIM2O14862 343 aa13.97□□□□□ -0.17
VPS33A-208ENST00000543633 XPOTO43592 962 aaKnown RBP13.97□□□□□ -0.17
VPS33A-208ENST00000543633 ZMPSTE24O75844 475 aa13.97□□□□□ -0.17
VPS33A-208ENST00000543633 TFAP2AP05549 437 aa13.97□□□□□ -0.17
VPS33A-208ENST00000543633 PGK2P07205 417 aa13.97□□□□□ -0.17
VPS33A-208ENST00000543633 MPSTP25325 297 aa13.97□□□□□ -0.17
VPS33A-208ENST00000543633 SEMA3BQ13214 749 aa13.97□□□□□ -0.17
VPS33A-208ENST00000543633 FBXO47Q5MNV8 452 aa13.97□□□□□ -0.17
VPS33A-208ENST00000543633 ARMC3Q5W041 872 aa13.97□□□□□ -0.17
VPS33A-208ENST00000543633 GADL1Q6ZQY3 521 aa13.97□□□□□ -0.17
VPS33A-208ENST00000543633 C7orf31Q8N865 590 aa13.97□□□□□ -0.17
VPS33A-208ENST00000543633 B4GALNT2Q8NHY0 566 aa13.97□□□□□ -0.17
VPS33A-208ENST00000543633 PPTC7Q8NI37 304 aa13.97□□□□□ -0.17
VPS33A-208ENST00000543633 IRGQQ8WZA9 623 aa13.97□□□□□ -0.17
VPS33A-208ENST00000543633 WNT8BQ93098 351 aa13.97□□□□□ -0.17
VPS33A-208ENST00000543633 HIC2Q96JB3 615 aa13.97□□□□□ -0.17
VPS33A-208ENST00000543633 ZMAT2Q96NC0 199 aaKnown RBP13.97□□□□□ -0.17
VPS33A-208ENST00000543633 SNX25Q9H3E2 840 aa13.97□□□□□ -0.17
VPS33A-208ENST00000543633 MROH8Q9H579 483 aa13.97□□□□□ -0.17
VPS33A-208ENST00000543633 LRRC4Q9HBW1 653 aa13.97□□□□□ -0.17
VPS33A-208ENST00000543633 TUBGCP4Q9UGJ1 667 aa13.97□□□□□ -0.17
VPS33A-208ENST00000543633 TLK1Q9UKI8 766 aa13.97□□□□□ -0.17
VPS33A-208ENST00000543633 PHF24Q9UPV7 400 aa13.97□□□□□ -0.17
VPS33A-208ENST00000543633 CSADQ9Y600 493 aa13.97□□□□□ -0.17
VPS33A-208ENST00000543633 ARHGAP10A1A4S6 786 aa13.96□□□□□ -0.17
VPS33A-208ENST00000543633 GRID2O43424 1007 aa13.96□□□□□ -0.17
VPS33A-208ENST00000543633 NPHS1O60500 1241 aa13.96□□□□□ -0.17
VPS33A-208ENST00000543633 DDHD2O94830 711 aa13.96□□□□□ -0.17
VPS33A-208ENST00000543633 LTFP02788 710 aa13.96□□□□□ -0.17
VPS33A-208ENST00000543633 ASLP04424 464 aa13.96□□□□□ -0.17
VPS33A-208ENST00000543633 XRCC1P18887 633 aaPredicted RBP13.96□□□□□ -0.17
VPS33A-208ENST00000543633 GNL1P36915 607 aaPredicted RBP13.96□□□□□ -0.17
VPS33A-208ENST00000543633 IRF9Q00978 393 aa13.96□□□□□ -0.17
VPS33A-208ENST00000543633 UGP2Q16851 508 aa13.96□□□□□ -0.17
VPS33A-208ENST00000543633 IRAK1BP1Q5VVH5 260 aa13.96□□□□□ -0.17
VPS33A-208ENST00000543633 CES3Q6UWW8 571 aa13.96□□□□□ -0.17
VPS33A-208ENST00000543633 ANKRD13AQ8IZ07 590 aa13.96□□□□□ -0.17
VPS33A-208ENST00000543633 FAM81AQ8TBF8 368 aa13.96□□□□□ -0.17
VPS33A-208ENST00000543633 CDRT15Q96T59 188 aa13.96□□□□□ -0.17
VPS33A-208ENST00000543633 HNRNPABQ99729 332 aaKnown RBP13.96□□□□□ -0.17
VPS33A-208ENST00000543633 WDR41Q9HAD4 459 aa13.96□□□□□ -0.17
VPS33A-208ENST00000543633 PIH1D1Q9NWS0 290 aaKnown RBP13.96□□□□□ -0.17
VPS33A-208ENST00000543633 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.95□□□□□ -0.18
VPS33A-208ENST00000543633 TRPC5OSA6NMA1 111 aa13.95□□□□□ -0.18
VPS33A-208ENST00000543633 C9IYK1 514 aa13.95□□□□□ -0.18
VPS33A-208ENST00000543633 PIRO00625 290 aa13.95□□□□□ -0.18
VPS33A-208ENST00000543633 TRIM38O00635 465 aa13.95□□□□□ -0.18
VPS33A-208ENST00000543633 PIGNO95427 931 aa13.95□□□□□ -0.18
VPS33A-208ENST00000543633 FAM163BP0C2L3 166 aa13.95□□□□□ -0.18
VPS33A-208ENST00000543633 FAM58BPP0C7Q3 252 aa13.95□□□□□ -0.18
VPS33A-208ENST00000543633 GRIA4P48058 902 aa13.95□□□□□ -0.18
VPS33A-208ENST00000543633 KPNA2P52292 529 aaKnown RBP13.95□□□□□ -0.18
VPS33A-208ENST00000543633 GJA9P57773 515 aa13.95□□□□□ -0.18
VPS33A-208ENST00000543633 CDC42EP1Q00587 391 aa13.95□□□□□ -0.18
VPS33A-208ENST00000543633 ZNF33AQ06730 810 aa13.95□□□□□ -0.18
VPS33A-208ENST00000543633 SLC12A1Q13621 1099 aa13.95□□□□□ -0.18
VPS33A-208ENST00000543633 ALKAL1Q6UXT8 129 aa13.95□□□□□ -0.18
VPS33A-208ENST00000543633 DNAAF3Q8N9W5 541 aa13.95□□□□□ -0.18
VPS33A-208ENST00000543633 RIN3Q8TB24 985 aa13.95□□□□□ -0.18
VPS33A-208ENST00000543633 LZICQ8WZA0 190 aa13.95□□□□□ -0.18
VPS33A-208ENST00000543633 FAM149B1Q96BN6 582 aa13.95□□□□□ -0.18
VPS33A-208ENST00000543633 RCN3Q96D15 328 aa13.95□□□□□ -0.18
VPS33A-208ENST00000543633 MAELQ96JY0 434 aaKnown RBP13.95□□□□□ -0.18
VPS33A-208ENST00000543633 SLC2A11Q9BYW1 496 aa13.95□□□□□ -0.18
VPS33A-208ENST00000543633 EPS15L1Q9UBC2 864 aa13.95□□□□□ -0.18
VPS33A-208ENST00000543633 SUCOQ9UBS9 1254 aaKnown RBP13.95□□□□□ -0.18
VPS33A-208ENST00000543633 CIDEBQ9UHD4 219 aa13.95□□□□□ -0.18
VPS33A-208ENST00000543633 LZTS1Q9Y250 596 aa13.95□□□□□ -0.18
VPS33A-208ENST00000543633 TARM1B6A8C7 271 aa13.95□□□□□ -0.18
VPS33A-208ENST00000543633 VILLO15195 856 aa13.95□□□□□ -0.18
VPS33A-208ENST00000543633 C8BP07358 591 aa13.95□□□□□ -0.18
VPS33A-208ENST00000543633 CHRNGP07510 517 aa13.95□□□□□ -0.18
VPS33A-208ENST00000543633 SRGAP2BP0DMP2 458 aa13.95□□□□□ -0.18
VPS33A-208ENST00000543633 TFEBP19484 476 aa13.95□□□□□ -0.18
VPS33A-208ENST00000543633 MRPS22P82650 360 aaKnown RBP13.95□□□□□ -0.18
VPS33A-208ENST00000543633 ADIGQ0VDE8 80 aa13.95□□□□□ -0.18
VPS33A-208ENST00000543633 GALNT2Q10471 571 aa13.95□□□□□ -0.18
VPS33A-208ENST00000543633 ART3Q13508 389 aa13.95□□□□□ -0.18
VPS33A-208ENST00000543633 CEACAM7Q14002 265 aa13.95□□□□□ -0.18
VPS33A-208ENST00000543633 MAPRE2Q15555 327 aa13.95□□□□□ -0.18
VPS33A-208ENST00000543633 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.95□□□□□ -0.18
VPS33A-208ENST00000543633 DCAF6Q58WW2 860 aa13.95□□□□□ -0.18
VPS33A-208ENST00000543633 NAPEPLDQ6IQ20 393 aa13.95□□□□□ -0.18
VPS33A-208ENST00000543633 LINC00523Q86TU6 105 aa13.95□□□□□ -0.18
VPS33A-208ENST00000543633 PIGZQ86VD9 579 aa13.95□□□□□ -0.18
VPS33A-208ENST00000543633 ZC3HC1Q86WB0 502 aaKnown RBP13.95□□□□□ -0.18
VPS33A-208ENST00000543633 CCDC117Q8IWD4 279 aaPredicted RBP13.95□□□□□ -0.18
VPS33A-208ENST00000543633 CNTN4Q8IWV2 1026 aa13.95□□□□□ -0.18
VPS33A-208ENST00000543633 TMEM151AQ8N4L1 468 aa13.95□□□□□ -0.18
VPS33A-208ENST00000543633 SHCBP1Q8NEM2 672 aa13.95□□□□□ -0.18
VPS33A-208ENST00000543633 SLC2A14Q8TDB8 520 aa13.95□□□□□ -0.18
VPS33A-208ENST00000543633 LENG1Q96BZ8 264 aaPredicted RBP13.95□□□□□ -0.18
VPS33A-208ENST00000543633 AGAP2Q99490 1192 aa13.95□□□□□ -0.18
VPS33A-208ENST00000543633 KIFC1Q9BW19 673 aa13.95□□□□□ -0.18
VPS33A-208ENST00000543633 DUSP16Q9BY84 665 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms