RNA–Protein interactions for RNA: ENST00000543469.1

TRIM59-208, Transcript of tripartite motif containing 59, humanhuman

TSL 5 BASIC

Gene TRIM59, Length 4,615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-208ENST00000543469 VSNL1P62760 191 aa8.12□□□□□ -1.11
TRIM59-208ENST00000543469 INO80DQ53TQ3 878 aaPredicted RBP8.12□□□□□ -1.11
TRIM59-208ENST00000543469 GRTP1Q5TC63 336 aa8.12□□□□□ -1.11
TRIM59-208ENST00000543469 LCA5Q86VQ0 697 aa8.12□□□□□ -1.11
TRIM59-208ENST00000543469 NOA1Q8NC60 698 aaKnown RBP8.12□□□□□ -1.11
TRIM59-208ENST00000543469 PCDH19Q8TAB3 1148 aa8.12□□□□□ -1.11
TRIM59-208ENST00000543469 ATG4AQ8WYN0 398 aa8.12□□□□□ -1.11
TRIM59-208ENST00000543469 PTPRN2Q92932 1015 aa8.12□□□□□ -1.11
TRIM59-208ENST00000543469 PEX13Q92968 403 aa8.12□□□□□ -1.11
TRIM59-208ENST00000543469 NT5C3BQ969T7 300 aa8.12□□□□□ -1.11
TRIM59-208ENST00000543469 RTP3Q9BQQ7 232 aa8.12□□□□□ -1.11
TRIM59-208ENST00000543469 TBC1D3BA6NDS4 549 aa8.12□□□□□ -1.11
TRIM59-208ENST00000543469 SESN2P58004 480 aaPredicted RBP8.12□□□□□ -1.11
TRIM59-208ENST00000543469 GRSF1Q12849 480 aaKnown RBP eCLIP8.12□□□□□ -1.11
TRIM59-208ENST00000543469 BIRC2Q13490 618 aa8.12□□□□□ -1.11
TRIM59-208ENST00000543469 LLGL1Q15334 1064 aa8.12□□□□□ -1.11
TRIM59-208ENST00000543469 SHHQ15465 462 aa8.12□□□□□ -1.11
TRIM59-208ENST00000543469 TEAD2Q15562 447 aa8.12□□□□□ -1.11
TRIM59-208ENST00000543469 ITPRIPL2Q3MIP1 535 aa8.12□□□□□ -1.11
TRIM59-208ENST00000543469 P2RY11Q96G91 374 aa8.12□□□□□ -1.11
TRIM59-208ENST00000543469 B3GALT6Q96L58 329 aa8.12□□□□□ -1.11
TRIM59-208ENST00000543469 KLF16Q9BXK1 252 aaPredicted RBP8.12□□□□□ -1.11
TRIM59-208ENST00000543469 DNAJC17Q9NVM6 304 aaKnown RBP8.12□□□□□ -1.11
TRIM59-208ENST00000543469 UTP6Q9NYH9 597 aaKnown RBP8.12□□□□□ -1.11
TRIM59-208ENST00000543469 FETUBQ9UGM5 382 aa8.12□□□□□ -1.11
TRIM59-208ENST00000543469 FBXL21Q9UKT6 434 aa8.12□□□□□ -1.11
TRIM59-208ENST00000543469 ANKRD6Q9Y2G4 727 aa8.12□□□□□ -1.11
TRIM59-208ENST00000543469 DRGXA6NNA5 263 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 COPEO14579 308 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 STAMBPO95630 424 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 EPOP01588 193 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 SPATA31D3P0C874 917 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 PABPC1P11940 636 aaKnown RBP8.11□□□□□ -1.11
TRIM59-208ENST00000543469 RPL22P35268 128 aaKnown RBP8.11□□□□□ -1.11
TRIM59-208ENST00000543469 CSE1LP55060 971 aaKnown RBP8.11□□□□□ -1.11
TRIM59-208ENST00000543469 RBM10P98175 930 aaKnown RBP8.11□□□□□ -1.11
TRIM59-208ENST00000543469 CYP4F8P98187 520 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 SERINC3Q13530 473 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 ITGA9Q13797 1035 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 ANKRD54Q6NXT1 300 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 SPATA31D4Q6ZUB0 917 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 PAQR9Q6ZVX9 377 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 ZMIZ2Q8NF64 920 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 OR6P1Q8NGX9 317 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 CLEC4CQ8WTT0 213 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 CCDC126Q96EE4 140 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 CELF6Q96J87 481 aaKnown RBP8.11□□□□□ -1.11
TRIM59-208ENST00000543469 SCYL1Q96KG9 808 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 FOPNLQ96NB1 174 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 TRIM56Q9BRZ2 755 aaKnown RBP8.11□□□□□ -1.11
TRIM59-208ENST00000543469 CCSER2Q9H7U1 834 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 VPS18Q9P253 973 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 CYTH4Q9UIA0 394 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 ERVW-1Q9UQF0 538 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 HHLA1C9JL84 531 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 TNFRSF10BO14763 440 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 MFSD11O43934 449 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 SNUPNO95149 360 aaKnown RBP8.11□□□□□ -1.11
TRIM59-208ENST00000543469 AP2A1O95782 977 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 NDST3O95803 873 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 CFHP08603 1231 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 ZDHHC11BP0C7U3 371 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 HOXC13P31276 330 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 CDK18Q07002 472 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 SEMA5AQ13591 1074 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 TRADDQ15628 312 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 LONRF1Q17RB8 773 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 TSNAXIP1Q2TAA8 658 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 HSF5Q4G112 596 aaPredicted RBP8.11□□□□□ -1.11
TRIM59-208ENST00000543469 FBXL22Q6P050 247 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 AFTPHQ6ULP2 937 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 B4GALNT4Q76KP1 1039 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 MPP5Q8N3R9 675 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 GDAP1Q8TB36 358 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 GPR152Q8TDT2 470 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 AUTS2Q8WXX7 1259 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 PBXIP1Q96AQ6 731 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 CPNE1Q99829 537 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 C17orf80Q9BSJ5 609 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 SYTL2Q9HCH5 934 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 SALL4Q9UJQ4 1053 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 STK38LQ9Y2H1 464 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 E5RI56 91 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 TULP2O00295 520 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 POLR3GO15318 223 aaPredicted RBP8.11□□□□□ -1.11
TRIM59-208ENST00000543469 ATP9BO43861 1147 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 BNIP3LO60238 219 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 PMPCBO75439 489 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 ACSL3O95573 720 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 DDX5P17844 614 aaKnown RBP8.11□□□□□ -1.11
TRIM59-208ENST00000543469 MARCKSL1P49006 195 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 RABGGTBP53611 331 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 SPARCL1Q14515 664 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 SETDB1Q15047 1291 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 FBXO43Q4G163 708 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 NCBP2-AS2Q69YL0 99 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 GRASPQ7Z6J2 395 aaPredicted RBP8.11□□□□□ -1.11
TRIM59-208ENST00000543469 LRRC6Q86X45 466 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 SLC22A17Q8WUG5 538 aa8.11□□□□□ -1.11
TRIM59-208ENST00000543469 ANKRD7Q92527 254 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms