RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 TCRBV9S1A1TA0A576 114 aa9.51□□□□□ -0.89
GNE-206ENST00000543356 TRDMT1O14717 391 aaKnown RBP9.51□□□□□ -0.89
GNE-206ENST00000543356 ANXA9O76027 345 aa9.51□□□□□ -0.89
GNE-206ENST00000543356 ARHGEF15O94989 841 aa9.51□□□□□ -0.89
GNE-206ENST00000543356 HLA-DQB2P05538 268 aa9.51□□□□□ -0.89
GNE-206ENST00000543356 IRF1P10914 325 aa9.51□□□□□ -0.89
GNE-206ENST00000543356 HOXA9P31269 272 aa9.51□□□□□ -0.89
GNE-206ENST00000543356 HNRNPH1P31943 449 aaKnown RBP9.51□□□□□ -0.89
GNE-206ENST00000543356 HPDP32754 393 aaPredicted RBP9.51□□□□□ -0.89
GNE-206ENST00000543356 RENBPP51606 427 aa9.51□□□□□ -0.89
GNE-206ENST00000543356 EPHA5P54756 1037 aa9.51□□□□□ -0.89
GNE-206ENST00000543356 SMAD3P84022 425 aaKnown RBP9.51□□□□□ -0.89
GNE-206ENST00000543356 SERINC3Q13530 473 aa9.51□□□□□ -0.89
GNE-206ENST00000543356 TXNDC8Q6A555 127 aa9.51□□□□□ -0.89
GNE-206ENST00000543356 RFWD3Q6PCD5 774 aa9.51□□□□□ -0.89
GNE-206ENST00000543356 Q6ZNB5 142 aa9.51□□□□□ -0.89
GNE-206ENST00000543356 GAREM2Q75VX8 874 aa9.51□□□□□ -0.89
GNE-206ENST00000543356 FAM217AQ8IXS0 508 aa9.51□□□□□ -0.89
GNE-206ENST00000543356 HS6ST3Q8IZP7 471 aa9.51□□□□□ -0.89
GNE-206ENST00000543356 PIAS4Q8N2W9 510 aaPredicted RBP9.51□□□□□ -0.89
GNE-206ENST00000543356 MPP5Q8N3R9 675 aa9.51□□□□□ -0.89
GNE-206ENST00000543356 ADAMTS19Q8TE59 1207 aa9.51□□□□□ -0.89
GNE-206ENST00000543356 USP33Q8TEY7 942 aa9.51□□□□□ -0.89
GNE-206ENST00000543356 STAMBPL1Q96FJ0 436 aa9.51□□□□□ -0.89
GNE-206ENST00000543356 OXNAD1Q96HP4 312 aaPredicted RBP9.51□□□□□ -0.89
GNE-206ENST00000543356 SLC22A12Q96S37 553 aa9.51□□□□□ -0.89
GNE-206ENST00000543356 MAGEH1Q9H213 219 aa9.51□□□□□ -0.89
GNE-206ENST00000543356 PLAC1Q9HBJ0 212 aa9.51□□□□□ -0.89
GNE-206ENST00000543356 ACTL7BQ9Y614 415 aa9.51□□□□□ -0.89
GNE-206ENST00000543356 A0A1B0GVM2 712 aa9.5□□□□□ -0.89
GNE-206ENST00000543356 TCAF2A6NFQ2 919 aa9.5□□□□□ -0.89
GNE-206ENST00000543356 GREM1O60565 184 aa9.5□□□□□ -0.89
GNE-206ENST00000543356 PGAM1P18669 254 aa9.5□□□□□ -0.89
GNE-206ENST00000543356 HDCP19113 662 aa9.5□□□□□ -0.89
GNE-206ENST00000543356 PRKCHP24723 683 aa9.5□□□□□ -0.89
GNE-206ENST00000543356 GEMP55040 296 aa9.5□□□□□ -0.89
GNE-206ENST00000543356 CYP4F8P98187 520 aa9.5□□□□□ -0.89
GNE-206ENST00000543356 LEKR1Q6ZMV7 388 aa9.5□□□□□ -0.89
GNE-206ENST00000543356 UNC5AQ6ZN44 842 aa9.5□□□□□ -0.89
GNE-206ENST00000543356 CYS1Q717R9 158 aa9.5□□□□□ -0.89
GNE-206ENST00000543356 LINC00523Q86TU6 105 aa9.5□□□□□ -0.89
GNE-206ENST00000543356 MICALL1Q8N3F8 863 aa9.5□□□□□ -0.89
GNE-206ENST00000543356 ARL14EPQ8N8R7 260 aaPredicted RBP9.5□□□□□ -0.89
GNE-206ENST00000543356 GSDMBQ8TAX9 411 aa9.5□□□□□ -0.89
GNE-206ENST00000543356 ARHGEF2Q92974 986 aaKnown RBP9.5□□□□□ -0.89
GNE-206ENST00000543356 WBP2Q969T9 261 aa9.5□□□□□ -0.89
GNE-206ENST00000543356 ZNF599Q96NL3 588 aa9.5□□□□□ -0.89
GNE-206ENST00000543356 RBM22Q9NW64 420 aaKnown RBP eCLIP9.5□□□□□ -0.89
GNE-206ENST00000543356 IRAK4Q9NWZ3 460 aa9.5□□□□□ -0.89
GNE-206ENST00000543356 CPQQ9Y646 472 aa9.5□□□□□ -0.89
GNE-206ENST00000543356 TRAV19A0A0A6YYK7 116 aa9.5□□□□□ -0.89
GNE-206ENST00000543356 POC1B-GALNT4F8VUJ3 575 aa9.5□□□□□ -0.89
GNE-206ENST00000543356 J3KR12 359 aa9.5□□□□□ -0.89
GNE-206ENST00000543356 GFRA2O00451 464 aa9.5□□□□□ -0.89
GNE-206ENST00000543356 GRM6O15303 877 aa9.5□□□□□ -0.89
GNE-206ENST00000543356 PRAMEF11O60813 436 aa9.5□□□□□ -0.89
GNE-206ENST00000543356 C1QAP02745 245 aa9.5□□□□□ -0.89
GNE-206ENST00000543356 POU2F2P09086 479 aa9.5□□□□□ -0.89
GNE-206ENST00000543356 DDX6P26196 483 aaKnown RBP eCLIP9.5□□□□□ -0.89
GNE-206ENST00000543356 MGAT1P26572 445 aa9.5□□□□□ -0.89
GNE-206ENST00000543356 ATP1A2P50993 1020 aa9.5□□□□□ -0.89
GNE-206ENST00000543356 CAMK1Q14012 370 aa9.5□□□□□ -0.89
GNE-206ENST00000543356 EFTUD2Q15029 972 aaKnown RBP eCLIP9.5□□□□□ -0.89
GNE-206ENST00000543356 C9orf50Q5SZB4 431 aa9.5□□□□□ -0.89
GNE-206ENST00000543356 C1QTNF12Q5T7M4 302 aa9.5□□□□□ -0.89
GNE-206ENST00000543356 NAPEPLDQ6IQ20 393 aa9.5□□□□□ -0.89
GNE-206ENST00000543356 ADGRD1Q6QNK2 874 aa9.5□□□□□ -0.89
GNE-206ENST00000543356 OTOP3Q7RTS5 596 aa9.5□□□□□ -0.89
GNE-206ENST00000543356 SETD3Q86TU7 594 aaPredicted RBP9.5□□□□□ -0.89
GNE-206ENST00000543356 EXOC3L1Q86VI1 746 aa9.5□□□□□ -0.89
GNE-206ENST00000543356 CFAP52Q8N1V2 620 aa9.5□□□□□ -0.89
GNE-206ENST00000543356 NSMCE1Q8WV22 266 aa9.5□□□□□ -0.89
GNE-206ENST00000543356 CYP2S1Q96SQ9 504 aa9.5□□□□□ -0.89
GNE-206ENST00000543356 PAFAH2Q99487 392 aa9.5□□□□□ -0.89
GNE-206ENST00000543356 CAPS2Q9BXY5 557 aa9.5□□□□□ -0.89
GNE-206ENST00000543356 SLC25A51Q9H1U9 297 aa9.5□□□□□ -0.89
GNE-206ENST00000543356 PDFQ9HBH1 243 aa9.5□□□□□ -0.89
GNE-206ENST00000543356 MAN1C1Q9NR34 630 aa9.5□□□□□ -0.89
GNE-206ENST00000543356 SMPD4Q9NXE4 827 aa9.5□□□□□ -0.89
GNE-206ENST00000543356 LSM7Q9UK45 103 aaKnown RBP9.5□□□□□ -0.89
GNE-206ENST00000543356 ZNF510Q9Y2H8 683 aa9.5□□□□□ -0.89
GNE-206ENST00000543356 MAD1L1Q9Y6D9 718 aa9.5□□□□□ -0.89
GNE-206ENST00000543356 NUP205Q92621 2012 aa9.5□□□□□ -0.89
GNE-206ENST00000543356 ILVBLA1L0T0 632 aa9.49□□□□□ -0.89
GNE-206ENST00000543356 EME2A4GXA9 379 aaPredicted RBP9.49□□□□□ -0.89
GNE-206ENST00000543356 SOBPA7XYQ1 873 aa9.49□□□□□ -0.89
GNE-206ENST00000543356 CCL16O15467 120 aa9.49□□□□□ -0.89
GNE-206ENST00000543356 CLASP2O75122 1294 aaKnown RBP9.49□□□□□ -0.89
GNE-206ENST00000543356 CA3P07451 260 aa9.49□□□□□ -0.89
GNE-206ENST00000543356 HNRNPA1P09651 372 aaKnown RBP eCLIP9.49□□□□□ -0.89
GNE-206ENST00000543356 MYOGP15173 224 aa9.49□□□□□ -0.89
GNE-206ENST00000543356 NPY2RP49146 381 aa9.49□□□□□ -0.89
GNE-206ENST00000543356 SGSHP51688 502 aa9.49□□□□□ -0.89
GNE-206ENST00000543356 ERVK-21P61565 698 aa9.49□□□□□ -0.89
GNE-206ENST00000543356 GNA12Q03113 381 aa9.49□□□□□ -0.89
GNE-206ENST00000543356 FRG1Q14331 258 aaKnown RBP9.49□□□□□ -0.89
GNE-206ENST00000543356 SPARCL1Q14515 664 aa9.49□□□□□ -0.89
GNE-206ENST00000543356 TMED2Q15363 201 aa9.49□□□□□ -0.89
GNE-206ENST00000543356 SKIDA1Q1XH10 827 aa9.49□□□□□ -0.89
GNE-206ENST00000543356 MARC1Q5VT66 337 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms