RNA–Protein interactions for RNA: ENST00000541852.5

ITM2C-208, Transcript of integral membrane protein 2C, humanhuman

TSL 3

Gene ITM2C, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-208ENST00000541852 SRCP12931 536 aa15.3■□□□□ 0.04
ITM2C-208ENST00000541852 HOXB3P14651 431 aaPredicted RBP15.3■□□□□ 0.04
ITM2C-208ENST00000541852 ACP1P24666 158 aa15.3■□□□□ 0.04
ITM2C-208ENST00000541852 MAT2AP31153 395 aaKnown RBP15.3■□□□□ 0.04
ITM2C-208ENST00000541852 AKT2P31751 481 aa15.3■□□□□ 0.04
ITM2C-208ENST00000541852 CDH5P33151 784 aaPredicted RBP15.3■□□□□ 0.04
ITM2C-208ENST00000541852 PPP2CBP62714 309 aa15.3■□□□□ 0.04
ITM2C-208ENST00000541852 PPP2CAP67775 309 aa15.3■□□□□ 0.04
ITM2C-208ENST00000541852 CENPCQ03188 943 aa15.3■□□□□ 0.04
ITM2C-208ENST00000541852 DEUP1Q05D60 604 aa15.3■□□□□ 0.04
ITM2C-208ENST00000541852 RETSATQ6NUM9 610 aa15.3■□□□□ 0.04
ITM2C-208ENST00000541852 FBXL19Q6PCT2 694 aa15.3■□□□□ 0.04
ITM2C-208ENST00000541852 LRRC69Q6ZNQ3 347 aa15.3■□□□□ 0.04
ITM2C-208ENST00000541852 Q6ZVU0 165 aa15.3■□□□□ 0.04
ITM2C-208ENST00000541852 ARCQ7LC44 396 aa15.3■□□□□ 0.04
ITM2C-208ENST00000541852 KANSL1Q7Z3B3 1105 aa15.3■□□□□ 0.04
ITM2C-208ENST00000541852 C14orf80Q86SX3 495 aa15.3■□□□□ 0.04
ITM2C-208ENST00000541852 SLC47A2Q86VL8 602 aa15.3■□□□□ 0.04
ITM2C-208ENST00000541852 ERICH1Q86X53 443 aa15.3■□□□□ 0.04
ITM2C-208ENST00000541852 IRF2BP1Q8IU81 584 aa15.3■□□□□ 0.04
ITM2C-208ENST00000541852 RFFLQ8WZ73 363 aa15.3■□□□□ 0.04
ITM2C-208ENST00000541852 PPP1R16AQ96I34 528 aa15.3■□□□□ 0.04
ITM2C-208ENST00000541852 LRIG1Q96JA1 1093 aa15.3■□□□□ 0.04
ITM2C-208ENST00000541852 HDAC8Q9BY41 377 aa15.3■□□□□ 0.04
ITM2C-208ENST00000541852 EVA1BQ9NVM1 165 aa15.3■□□□□ 0.04
ITM2C-208ENST00000541852 AK5Q9Y6K8 562 aa15.3■□□□□ 0.04
ITM2C-208ENST00000541852 TP53BP1Q12888 1972 aaPredicted RBP15.29■□□□□ 0.04
ITM2C-208ENST00000541852 ILVBLA1L0T0 632 aa15.29■□□□□ 0.04
ITM2C-208ENST00000541852 NEMP2A6NFY4 417 aa15.29■□□□□ 0.04
ITM2C-208ENST00000541852 KPNA3O00505 521 aaPredicted RBP15.29■□□□□ 0.04
ITM2C-208ENST00000541852 BNIP3LO60238 219 aa15.29■□□□□ 0.04
ITM2C-208ENST00000541852 ADCY5O95622 1261 aa15.29■□□□□ 0.04
ITM2C-208ENST00000541852 OR1E1P30953 314 aa15.29■□□□□ 0.04
ITM2C-208ENST00000541852 RNASE9P60153 205 aaKnown RBP15.29■□□□□ 0.04
ITM2C-208ENST00000541852 TARDBPQ13148 414 aaKnown RBP eCLIP15.29■□□□□ 0.04
ITM2C-208ENST00000541852 DNAJC3Q13217 504 aa15.29■□□□□ 0.04
ITM2C-208ENST00000541852 PTPN20Q4JDL3 420 aa15.29■□□□□ 0.04
ITM2C-208ENST00000541852 SOWAHCQ53LP3 525 aaPredicted RBP15.29■□□□□ 0.04
ITM2C-208ENST00000541852 HES3Q5TGS1 186 aa15.29■□□□□ 0.04
ITM2C-208ENST00000541852 HORMAD1Q86X24 394 aa15.29■□□□□ 0.04
ITM2C-208ENST00000541852 MARCH9Q86YJ5 346 aa15.29■□□□□ 0.04
ITM2C-208ENST00000541852 DCAF4L2Q8NA75 395 aa15.29■□□□□ 0.04
ITM2C-208ENST00000541852 TMEM145Q8NBT3 493 aa15.29■□□□□ 0.04
ITM2C-208ENST00000541852 OR52K2Q8NGK3 314 aa15.29■□□□□ 0.04
ITM2C-208ENST00000541852 OR2A12Q8NGT7 310 aa15.29■□□□□ 0.04
ITM2C-208ENST00000541852 BAP1Q92560 729 aa15.29■□□□□ 0.04
ITM2C-208ENST00000541852 CEP44Q9C0F1 390 aa15.29■□□□□ 0.04
ITM2C-208ENST00000541852 NDST4Q9H3R1 872 aa15.29■□□□□ 0.04
ITM2C-208ENST00000541852 PIGVQ9NUD9 493 aa15.29■□□□□ 0.04
ITM2C-208ENST00000541852 DACH1Q9UI36 760 aa15.29■□□□□ 0.04
ITM2C-208ENST00000541852 HS3ST3A1Q9Y663 406 aa15.29■□□□□ 0.04
ITM2C-208ENST00000541852 IGLV3-10A0A075B6K4 115 aa15.28■□□□□ 0.04
ITM2C-208ENST00000541852 A0A1W2PQU0 124 aa15.28■□□□□ 0.04
ITM2C-208ENST00000541852 CNTN5O94779 1100 aa15.28■□□□□ 0.04
ITM2C-208ENST00000541852 LSM8O95777 96 aaKnown RBP15.28■□□□□ 0.04
ITM2C-208ENST00000541852 MT-CO1P00395 513 aa15.28■□□□□ 0.04
ITM2C-208ENST00000541852 THEGLP0DJG4 465 aa15.28■□□□□ 0.04
ITM2C-208ENST00000541852 ALPPL2P10696 532 aa15.28■□□□□ 0.04
ITM2C-208ENST00000541852 HNRNPA2B1P22626 353 aaKnown RBP15.28■□□□□ 0.04
ITM2C-208ENST00000541852 ETFBP38117 255 aa15.28■□□□□ 0.04
ITM2C-208ENST00000541852 SULT1E1P49888 294 aa15.28■□□□□ 0.04
ITM2C-208ENST00000541852 METAP1P53582 386 aa15.28■□□□□ 0.04
ITM2C-208ENST00000541852 TAS2R38P59533 333 aa15.28■□□□□ 0.04
ITM2C-208ENST00000541852 KCNMA1Q12791 1236 aa15.28■□□□□ 0.04
ITM2C-208ENST00000541852 CAMK4Q16566 473 aa15.28■□□□□ 0.04
ITM2C-208ENST00000541852 VWA3BQ502W6 1294 aa15.28■□□□□ 0.04
ITM2C-208ENST00000541852 CT47A1Q5JQC4 288 aaPredicted RBP15.28■□□□□ 0.04
ITM2C-208ENST00000541852 PIP5KL1Q5T9C9 394 aa15.28■□□□□ 0.04
ITM2C-208ENST00000541852 ERN2Q76MJ5 926 aaKnown RBP15.28■□□□□ 0.04
ITM2C-208ENST00000541852 PLPP6Q8IY26 295 aa15.28■□□□□ 0.04
ITM2C-208ENST00000541852 FEM1CQ96JP0 617 aa15.28■□□□□ 0.04
ITM2C-208ENST00000541852 USP29Q9HBJ7 922 aa15.28■□□□□ 0.04
ITM2C-208ENST00000541852 SIX2Q9NPC8 291 aa15.28■□□□□ 0.04
ITM2C-208ENST00000541852 IL36AQ9UHA7 158 aa15.28■□□□□ 0.04
ITM2C-208ENST00000541852 VPS51Q9UID3 782 aa15.28■□□□□ 0.04
ITM2C-208ENST00000541852 CLCA2Q9UQC9 943 aa15.28■□□□□ 0.04
ITM2C-208ENST00000541852 IGSF10Q6WRI0 2623 aa15.28■□□□□ 0.04
ITM2C-208ENST00000541852 NYNRINQ9P2P1 1898 aaKnown RBP15.27■□□□□ 0.04
ITM2C-208ENST00000541852 SLC31A1O15431 190 aa15.27■□□□□ 0.04
ITM2C-208ENST00000541852 PCDH8O95206 1070 aa15.27■□□□□ 0.04
ITM2C-208ENST00000541852 CYP11B1P15538 503 aa15.27■□□□□ 0.04
ITM2C-208ENST00000541852 ERCC5P28715 1186 aaPredicted RBP15.27■□□□□ 0.04
ITM2C-208ENST00000541852 ABCG1P45844 678 aa15.27■□□□□ 0.04
ITM2C-208ENST00000541852 DUSP3P51452 185 aaPredicted RBP15.27■□□□□ 0.04
ITM2C-208ENST00000541852 RPS21P63220 83 aaKnown RBP15.27■□□□□ 0.04
ITM2C-208ENST00000541852 APBA1Q02410 837 aa15.27■□□□□ 0.04
ITM2C-208ENST00000541852 DRAP1Q14919 205 aaPredicted RBP15.27■□□□□ 0.04
ITM2C-208ENST00000541852 ZNF284Q2VY69 593 aa15.27■□□□□ 0.04
ITM2C-208ENST00000541852 PROX2Q3B8N5 592 aa15.27■□□□□ 0.04
ITM2C-208ENST00000541852 ALFQ53S48 1182 aa15.27■□□□□ 0.04
ITM2C-208ENST00000541852 ARSIQ5FYB1 569 aa15.27■□□□□ 0.04
ITM2C-208ENST00000541852 ZNF683Q8IZ20 524 aa15.27■□□□□ 0.04
ITM2C-208ENST00000541852 PCDH20Q8N6Y1 951 aaKnown RBP15.27■□□□□ 0.04
ITM2C-208ENST00000541852 OR4C6Q8NH72 309 aa15.27■□□□□ 0.04
ITM2C-208ENST00000541852 PSMB7Q99436 277 aa15.27■□□□□ 0.04
ITM2C-208ENST00000541852 TUBGCP2Q9BSJ2 902 aa15.27■□□□□ 0.04
ITM2C-208ENST00000541852 DUSP23Q9BVJ7 150 aa15.27■□□□□ 0.04
ITM2C-208ENST00000541852 PPARGC1AQ9UBK2 798 aaKnown RBP15.27■□□□□ 0.04
ITM2C-208ENST00000541852 GTF3C3Q9Y5Q9 886 aa15.27■□□□□ 0.04
ITM2C-208ENST00000541852 TK2O00142 265 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms