RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 TUBD1Q9UJT1 453 aa10.06□□□□□ -0.8
CHFR-220ENST00000541817 STRIP2Q9ULQ0 834 aa10.06□□□□□ -0.8
CHFR-220ENST00000541817 HPSEQ9Y251 543 aa10.06□□□□□ -0.8
CHFR-220ENST00000541817 TP53TG5Q9Y2B4 290 aa10.06□□□□□ -0.8
CHFR-220ENST00000541817 PCDHA5Q9Y5H7 936 aa10.06□□□□□ -0.8
CHFR-220ENST00000541817 ZFHX3Q15911 3703 aa10.06□□□□□ -0.8
CHFR-220ENST00000541817 BIN1O00499 593 aa10.05□□□□□ -0.8
CHFR-220ENST00000541817 IKBKBO14920 756 aa10.05□□□□□ -0.8
CHFR-220ENST00000541817 NKX2-8O15522 239 aa10.05□□□□□ -0.8
CHFR-220ENST00000541817 MSI1O43347 362 aaKnown RBP10.05□□□□□ -0.8
CHFR-220ENST00000541817 DUX1O43812 170 aa10.05□□□□□ -0.8
CHFR-220ENST00000541817 DIAPH2O60879 1101 aa10.05□□□□□ -0.8
CHFR-220ENST00000541817 PHACTR2O75167 634 aa10.05□□□□□ -0.8
CHFR-220ENST00000541817 SMC2O95347 1197 aa10.05□□□□□ -0.8
CHFR-220ENST00000541817 PRF1P14222 555 aa10.05□□□□□ -0.8
CHFR-220ENST00000541817 UBA7P41226 1012 aa10.05□□□□□ -0.8
CHFR-220ENST00000541817 PSEN1P49768 467 aa10.05□□□□□ -0.8
CHFR-220ENST00000541817 KLRB1Q12918 225 aa10.05□□□□□ -0.8
CHFR-220ENST00000541817 TPD52L1Q16890 204 aaPredicted RBP10.05□□□□□ -0.8
CHFR-220ENST00000541817 LACTB2Q53H82 288 aaPredicted RBP10.05□□□□□ -0.8
CHFR-220ENST00000541817 TPRG1LQ5T0D9 272 aa10.05□□□□□ -0.8
CHFR-220ENST00000541817 AGBL4Q5VU57 503 aa10.05□□□□□ -0.8
CHFR-220ENST00000541817 SHC4Q6S5L8 630 aa10.05□□□□□ -0.8
CHFR-220ENST00000541817 KRBA2Q6ZNG9 492 aa10.05□□□□□ -0.8
CHFR-220ENST00000541817 HEATR4Q86WZ0 1026 aa10.05□□□□□ -0.8
CHFR-220ENST00000541817 MFN1Q8IWA4 741 aa10.05□□□□□ -0.8
CHFR-220ENST00000541817 LRRC8AQ8IWT6 810 aa10.05□□□□□ -0.8
CHFR-220ENST00000541817 APCDD1Q8J025 514 aa10.05□□□□□ -0.8
CHFR-220ENST00000541817 ZNF276Q8N554 614 aa10.05□□□□□ -0.8
CHFR-220ENST00000541817 KCTD17Q8N5Z5 321 aa10.05□□□□□ -0.8
CHFR-220ENST00000541817 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.05□□□□□ -0.8
CHFR-220ENST00000541817 LARP4BQ92615 738 aaKnown RBP10.05□□□□□ -0.8
CHFR-220ENST00000541817 ERCC4Q92889 916 aaPredicted RBP10.05□□□□□ -0.8
CHFR-220ENST00000541817 PLD4Q96BZ4 506 aa10.05□□□□□ -0.8
CHFR-220ENST00000541817 BMFQ96LC9 184 aa10.05□□□□□ -0.8
CHFR-220ENST00000541817 GFM1Q96RP9 751 aaKnown RBP10.05□□□□□ -0.8
CHFR-220ENST00000541817 TWNKQ96RR1 684 aa10.05□□□□□ -0.8
CHFR-220ENST00000541817 CLIC5Q9NZA1 410 aa10.05□□□□□ -0.8
CHFR-220ENST00000541817 SIRPGQ9P1W8 387 aa10.05□□□□□ -0.8
CHFR-220ENST00000541817 GULP1Q9UBP9 304 aa10.05□□□□□ -0.8
CHFR-220ENST00000541817 SALL4Q9UJQ4 1053 aa10.05□□□□□ -0.8
CHFR-220ENST00000541817 TPX2Q9ULW0 747 aaKnown RBP10.05□□□□□ -0.8
CHFR-220ENST00000541817 PADI4Q9UM07 663 aa10.05□□□□□ -0.8
CHFR-220ENST00000541817 CEP83Q9Y592 693 aa10.05□□□□□ -0.8
CHFR-220ENST00000541817 ADGRG4Q8IZF6 3080 aa10.05□□□□□ -0.8
CHFR-220ENST00000541817 CELSR1Q9NYQ6 3014 aa10.04□□□□□ -0.8
CHFR-220ENST00000541817 SETD2Q9BYW2 2564 aaPredicted RBP10.04□□□□□ -0.8
CHFR-220ENST00000541817 A0A1W2PQM1 296 aa10.04□□□□□ -0.8
CHFR-220ENST00000541817 POM121BA6NF01 834 aa10.04□□□□□ -0.8
CHFR-220ENST00000541817 BNIP3LO60238 219 aa10.04□□□□□ -0.8
CHFR-220ENST00000541817 GCATO75600 419 aa10.04□□□□□ -0.8
CHFR-220ENST00000541817 CSF2P04141 144 aa10.04□□□□□ -0.8
CHFR-220ENST00000541817 JUNDP17535 347 aa10.04□□□□□ -0.8
CHFR-220ENST00000541817 AKT2P31751 481 aa10.04□□□□□ -0.8
CHFR-220ENST00000541817 CASP4P49662 377 aa10.04□□□□□ -0.8
CHFR-220ENST00000541817 ADKP55263 362 aaKnown RBP10.04□□□□□ -0.8
CHFR-220ENST00000541817 YWHAGP61981 247 aaKnown RBP eCLIP10.04□□□□□ -0.8
CHFR-220ENST00000541817 EIF2S3LQ2VIR3 472 aaKnown RBP10.04□□□□□ -0.8
CHFR-220ENST00000541817 ZNF284Q2VY69 593 aa10.04□□□□□ -0.8
CHFR-220ENST00000541817 ZNF699Q32M78 642 aa10.04□□□□□ -0.8
CHFR-220ENST00000541817 DPCR1Q3MIW9 517 aa10.04□□□□□ -0.8
CHFR-220ENST00000541817 ZNF667Q5HYK9 610 aa10.04□□□□□ -0.8
CHFR-220ENST00000541817 PITRM1Q5JRX3 1037 aa10.04□□□□□ -0.8
CHFR-220ENST00000541817 ADGRF1Q5T601 910 aa10.04□□□□□ -0.8
CHFR-220ENST00000541817 PIK3R6Q5UE93 754 aa10.04□□□□□ -0.8
CHFR-220ENST00000541817 NUGGCQ68CJ6 796 aa10.04□□□□□ -0.8
CHFR-220ENST00000541817 SEL1L3Q68CR1 1132 aa10.04□□□□□ -0.8
CHFR-220ENST00000541817 CFAP52Q8N1V2 620 aa10.04□□□□□ -0.8
CHFR-220ENST00000541817 TEX19Q8NA77 164 aa10.04□□□□□ -0.8
CHFR-220ENST00000541817 CCDC150Q8NCX0 1101 aa10.04□□□□□ -0.8
CHFR-220ENST00000541817 EDEM1Q92611 657 aa10.04□□□□□ -0.8
CHFR-220ENST00000541817 NKD1Q969G9 470 aa10.04□□□□□ -0.8
CHFR-220ENST00000541817 CCDC74AQ96AQ1 378 aa10.04□□□□□ -0.8
CHFR-220ENST00000541817 CYFIP2Q96F07 1278 aa10.04□□□□□ -0.8
CHFR-220ENST00000541817 CLIC6Q96NY7 704 aa10.04□□□□□ -0.8
CHFR-220ENST00000541817 BOCQ9BWV1 1114 aa10.04□□□□□ -0.8
CHFR-220ENST00000541817 CPEB1Q9BZB8 566 aaKnown RBP10.04□□□□□ -0.8
CHFR-220ENST00000541817 PDCL3Q9H2J4 239 aa10.04□□□□□ -0.8
CHFR-220ENST00000541817 ZFR2Q9UPR6 939 aaKnown RBP10.04□□□□□ -0.8
CHFR-220ENST00000541817 MORC2Q9Y6X9 1032 aaPredicted RBP10.04□□□□□ -0.8
CHFR-220ENST00000541817 AKAP9Q99996 3911 aa10.03□□□□□ -0.8
CHFR-220ENST00000541817 A0A1B0GTL3 188 aa10.03□□□□□ -0.8
CHFR-220ENST00000541817 D6RAR5 112 aa10.03□□□□□ -0.8
CHFR-220ENST00000541817 ASLP04424 464 aa10.03□□□□□ -0.8
CHFR-220ENST00000541817 RPLP0P05388 317 aaKnown RBP10.03□□□□□ -0.8
CHFR-220ENST00000541817 CELA2BP08218 269 aaPredicted RBP10.03□□□□□ -0.8
CHFR-220ENST00000541817 IDEP14735 1019 aa10.03□□□□□ -0.8
CHFR-220ENST00000541817 HNRNPA2B1P22626 353 aaKnown RBP10.03□□□□□ -0.8
CHFR-220ENST00000541817 NOS2P35228 1153 aa10.03□□□□□ -0.8
CHFR-220ENST00000541817 NUDT1P36639 197 aa10.03□□□□□ -0.8
CHFR-220ENST00000541817 RPS24P62847 133 aaKnown RBP10.03□□□□□ -0.8
CHFR-220ENST00000541817 LRMPQ12912 555 aa10.03□□□□□ -0.8
CHFR-220ENST00000541817 EIF3IQ13347 325 aaKnown RBP10.03□□□□□ -0.8
CHFR-220ENST00000541817 BMT2Q1RMZ1 405 aa10.03□□□□□ -0.8
CHFR-220ENST00000541817 DEFB109BQ30KR1 87 aa10.03□□□□□ -0.8
CHFR-220ENST00000541817 KRTAP21-3Q3LHN1 58 aa10.03□□□□□ -0.8
CHFR-220ENST00000541817 ATP1A1-AS1Q5TC04 95 aa10.03□□□□□ -0.8
CHFR-220ENST00000541817 SV2AQ7L0J3 742 aa10.03□□□□□ -0.8
CHFR-220ENST00000541817 ABI3BPQ7Z7G0 1075 aa10.03□□□□□ -0.8
CHFR-220ENST00000541817 CRYBG2Q8N1P7 616 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms