RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 FAM90A23PA8MXZ1 464 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 LACTBL1A8MY62 500 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 KCNJ18B7U540 433 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 CCDC188H7C350 402 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 O00370 1275 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 BCAR3O75815 825 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 RPP40O75818 363 aaKnown RBP5.73□□□□□ -1.49
DDB1-219ENST00000541513 UNC5CO95185 931 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 SERPINB2P05120 415 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 GNAI3P08754 354 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 PDHBP11177 359 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 TOP1P11387 765 aaKnown RBP5.73□□□□□ -1.49
DDB1-219ENST00000541513 TMEM11P17152 192 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 ARF4P18085 180 aaPredicted RBP5.73□□□□□ -1.49
DDB1-219ENST00000541513 MCM3P25205 808 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 PTPN3P26045 913 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 MTIF2P46199 727 aaKnown RBP5.73□□□□□ -1.49
DDB1-219ENST00000541513 MRPL12P52815 198 aaKnown RBP5.73□□□□□ -1.49
DDB1-219ENST00000541513 ATXN3P54252 364 aaPredicted RBP5.73□□□□□ -1.49
DDB1-219ENST00000541513 CDH15P55291 814 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 UCP3P55916 312 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 KRT76Q01546 638 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 RNASELQ05823 741 aaKnown RBP5.73□□□□□ -1.49
DDB1-219ENST00000541513 PPATQ06203 517 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 NFATC3Q12968 1075 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 PDCLQ13371 301 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 RCN2Q14257 317 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 KCNJ12Q14500 433 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 ANKRD20A4Q4UJ75 823 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 ANKRD20A8PQ5CZ79 823 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 SPDYAQ5MJ70 313 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 ANKRD20A2Q5SQ80 823 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 TTC39AQ5SRH9 613 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 ANKRD20A1Q5TYW2 823 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 ANKRD20A3Q5VUR7 823 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 CES4AQ5XG92 561 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 GRAMD4Q6IC98 578 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 TTI2Q6NXR4 508 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 SEZ6L2Q6UXD5 910 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 ZNF365Q70YC5 407 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 MTERF4Q7Z6M4 381 aaKnown RBP5.73□□□□□ -1.49
DDB1-219ENST00000541513 TICAM1Q8IUC6 712 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 SYCP3Q8IZU3 236 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 PQLC1Q8N2U9 271 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 TOP6BLQ8N6T0 577 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 FAM181AQ8N9Y4 354 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 C12orf50Q8NA57 414 aaPredicted RBP5.73□□□□□ -1.49
DDB1-219ENST00000541513 ATAD1Q8NBU5 361 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 KIAA1524Q8TCG1 905 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 SLC2A12Q8TD20 617 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 ZNF480Q8WV37 535 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 EZH1Q92800 747 aaPredicted RBP5.73□□□□□ -1.49
DDB1-219ENST00000541513 TUBGCP3Q96CW5 907 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 GIMAP5Q96F15 307 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 NEK1Q96PY6 1258 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 FAM111AQ96PZ2 611 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 LBHD1Q9BQE6 289 aaPredicted RBP5.73□□□□□ -1.49
DDB1-219ENST00000541513 HTATIP2Q9BUP3 242 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 MS4A7Q9GZW8 240 aaPredicted RBP5.73□□□□□ -1.49
DDB1-219ENST00000541513 ABCG8Q9H221 673 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 SEMA6CQ9H3T2 930 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 SH2D4AQ9H788 454 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 PLEKHA2Q9HB19 425 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 PCDHB16Q9NRJ7 776 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 SLC35D1Q9NTN3 355 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 UCKL1Q9NWZ5 548 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 AATFQ9NY61 560 aaKnown RBP eCLIP5.73□□□□□ -1.49
DDB1-219ENST00000541513 CYP39A1Q9NYL5 469 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 MPP6Q9NZW5 540 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 CFAP97Q9P2B7 532 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 NIP7Q9Y221 180 aaKnown RBP eCLIP5.73□□□□□ -1.49
DDB1-219ENST00000541513 TMED5Q9Y3A6 229 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 NEU2Q9Y3R4 380 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 PCDHA5Q9Y5H7 936 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 ARFGEF1Q9Y6D6 1849 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 COL11A2P13942 1736 aaPredicted RBP5.73□□□□□ -1.49
DDB1-219ENST00000541513 ABCC4O15439 1325 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 ATP8B3O60423 1300 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 TNRC6CQ9HCJ0 1690 aaKnown RBP5.72□□□□□ -1.49
DDB1-219ENST00000541513 A0A0A0MRY4 1105 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 A0A0G2JPF8 293 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 PNMA6EA0A0J9YXQ4 647 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 OR2A25A4D2G3 310 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 SH2D7A6NKC9 451 aaPredicted RBP5.72□□□□□ -1.49
DDB1-219ENST00000541513 NEURL1BA8MQ27 555 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 C1QTNF9BB2RNN3 333 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 HNRNPCL3B7ZW38 293 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 FAM86B1E9PN63 330 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 PRPF4O43172 522 aaKnown RBP eCLIP5.72□□□□□ -1.49
DDB1-219ENST00000541513 ADCY6O43306 1168 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 SLC25A17O43808 307 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 TAF5LO75529 589 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 DDAH2O95865 285 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 IFNB1P01574 187 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 GNAI2P04899 355 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 CFIP05156 583 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 IGKV5-2P06315 115 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 GRPP07492 148 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 GLI1P08151 1106 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 HNRNPCL4P0DMR1 293 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms