RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 UBAP1Q9NZ09 502 aa9.72□□□□□ -0.85
CNOT4-212ENST00000541284 EEF2KO00418 725 aaKnown RBP9.71□□□□□ -0.85
CNOT4-212ENST00000541284 PTGESO14684 152 aa9.71□□□□□ -0.85
CNOT4-212ENST00000541284 MPOP05164 745 aa9.71□□□□□ -0.85
CNOT4-212ENST00000541284 SPATA31D3P0C874 917 aa9.71□□□□□ -0.85
CNOT4-212ENST00000541284 ZNF865P0CJ78 1059 aaPredicted RBP9.71□□□□□ -0.85
CNOT4-212ENST00000541284 NCF2P19878 526 aaPredicted RBP9.71□□□□□ -0.85
CNOT4-212ENST00000541284 ACAT1P24752 427 aaKnown RBP9.71□□□□□ -0.85
CNOT4-212ENST00000541284 SPRP35270 261 aaPredicted RBP9.71□□□□□ -0.85
CNOT4-212ENST00000541284 TLR1Q15399 786 aa9.71□□□□□ -0.85
CNOT4-212ENST00000541284 ZRSR2Q15696 482 aaKnown RBP9.71□□□□□ -0.85
CNOT4-212ENST00000541284 LSM12Q3MHD2 195 aaKnown RBP9.71□□□□□ -0.85
CNOT4-212ENST00000541284 RAB41Q5JT25 222 aa9.71□□□□□ -0.85
CNOT4-212ENST00000541284 NOTUMQ6P988 496 aa9.71□□□□□ -0.85
CNOT4-212ENST00000541284 ZYG11AQ6WRX3 759 aa9.71□□□□□ -0.85
CNOT4-212ENST00000541284 SPATA31D4Q6ZUB0 917 aa9.71□□□□□ -0.85
CNOT4-212ENST00000541284 PID1Q7Z2X4 250 aa9.71□□□□□ -0.85
CNOT4-212ENST00000541284 ZC3HC1Q86WB0 502 aaKnown RBP9.71□□□□□ -0.85
CNOT4-212ENST00000541284 NME8Q8N427 588 aa9.71□□□□□ -0.85
CNOT4-212ENST00000541284 CNTD1Q8N815 330 aa9.71□□□□□ -0.85
CNOT4-212ENST00000541284 CCNYQ8ND76 341 aa9.71□□□□□ -0.85
CNOT4-212ENST00000541284 ADAM32Q8TC27 787 aa9.71□□□□□ -0.85
CNOT4-212ENST00000541284 PPP4R1Q8TF05 950 aa9.71□□□□□ -0.85
CNOT4-212ENST00000541284 HDAC11Q96DB2 347 aa9.71□□□□□ -0.85
CNOT4-212ENST00000541284 PGAP3Q96FM1 320 aaPredicted RBP9.71□□□□□ -0.85
CNOT4-212ENST00000541284 VPS39Q96JC1 886 aa9.71□□□□□ -0.85
CNOT4-212ENST00000541284 SLC9A7Q96T83 725 aa9.71□□□□□ -0.85
CNOT4-212ENST00000541284 CDY2AQ9Y6F7 541 aa9.71□□□□□ -0.85
CNOT4-212ENST00000541284 CDY1Q9Y6F8 540 aa9.71□□□□□ -0.85
CNOT4-212ENST00000541284 TRIM13O60858 407 aa9.71□□□□□ -0.85
CNOT4-212ENST00000541284 PGK1P00558 417 aa9.71□□□□□ -0.85
CNOT4-212ENST00000541284 PABPC4LP0CB38 370 aaKnown RBP9.71□□□□□ -0.85
CNOT4-212ENST00000541284 CTGFP29279 349 aa9.71□□□□□ -0.85
CNOT4-212ENST00000541284 HCAR3P49019 387 aa9.71□□□□□ -0.85
CNOT4-212ENST00000541284 THOP1P52888 689 aa9.71□□□□□ -0.85
CNOT4-212ENST00000541284 CSE1LP55060 971 aaKnown RBP9.71□□□□□ -0.85
CNOT4-212ENST00000541284 MS4A2Q01362 244 aa9.71□□□□□ -0.85
CNOT4-212ENST00000541284 CREB5Q02930 508 aa9.71□□□□□ -0.85
CNOT4-212ENST00000541284 CEACAM7Q14002 265 aa9.71□□□□□ -0.85
CNOT4-212ENST00000541284 TMC7Q7Z402 723 aa9.71□□□□□ -0.85
CNOT4-212ENST00000541284 STYXQ8WUJ0 223 aa9.71□□□□□ -0.85
CNOT4-212ENST00000541284 SMOQ99835 787 aa9.71□□□□□ -0.85
CNOT4-212ENST00000541284 NMRAL1Q9HBL8 299 aa9.71□□□□□ -0.85
CNOT4-212ENST00000541284 FLRT1Q9NZU1 646 aa9.71□□□□□ -0.85
CNOT4-212ENST00000541284 CACNG4Q9UBN1 327 aa9.71□□□□□ -0.85
CNOT4-212ENST00000541284 PPP1R1BQ9UD71 204 aaPredicted RBP9.71□□□□□ -0.85
CNOT4-212ENST00000541284 STK39Q9UEW8 545 aa9.71□□□□□ -0.85
CNOT4-212ENST00000541284 ZDHHC2Q9UIJ5 367 aa9.71□□□□□ -0.85
CNOT4-212ENST00000541284 FBXW11Q9UKB1 542 aa9.71□□□□□ -0.85
CNOT4-212ENST00000541284 SSX2IPQ9Y2D8 614 aa9.71□□□□□ -0.85
CNOT4-212ENST00000541284 CEP350Q5VT06 3117 aa9.71□□□□□ -0.85
CNOT4-212ENST00000541284 SYNJ2BP-COX16A0A087WUM0 186 aa9.71□□□□□ -0.86
CNOT4-212ENST00000541284 A0A1B0GVG6 124 aa9.71□□□□□ -0.86
CNOT4-212ENST00000541284 F2P00734 622 aa9.71□□□□□ -0.86
CNOT4-212ENST00000541284 MYCNP04198 464 aaPredicted RBP9.71□□□□□ -0.86
CNOT4-212ENST00000541284 DESP17661 470 aa9.71□□□□□ -0.86
CNOT4-212ENST00000541284 NFKB1P19838 968 aa9.71□□□□□ -0.86
CNOT4-212ENST00000541284 DAOAP59103 153 aa9.71□□□□□ -0.86
CNOT4-212ENST00000541284 IFRD2Q12894 506 aaPredicted RBP9.71□□□□□ -0.86
CNOT4-212ENST00000541284 FAM110CQ1W6H9 321 aa9.71□□□□□ -0.86
CNOT4-212ENST00000541284 SPRYD7Q5W111 196 aa9.71□□□□□ -0.86
CNOT4-212ENST00000541284 KCNMB4Q86W47 210 aa9.71□□□□□ -0.86
CNOT4-212ENST00000541284 FAM149B1Q96BN6 582 aa9.71□□□□□ -0.86
CNOT4-212ENST00000541284 IL22Q9GZX6 179 aa9.71□□□□□ -0.86
CNOT4-212ENST00000541284 COX16Q9P0S2 106 aa9.71□□□□□ -0.86
CNOT4-212ENST00000541284 ARHGAP26Q9UNA1 814 aa9.71□□□□□ -0.86
CNOT4-212ENST00000541284 GOLGA8QA0A0J9YX86 632 aa9.7□□□□□ -0.86
CNOT4-212ENST00000541284 GOLGA8OA6NCC3 632 aa9.7□□□□□ -0.86
CNOT4-212ENST00000541284 GOLGA8NF8WBI6 632 aa9.7□□□□□ -0.86
CNOT4-212ENST00000541284 GOLGA8TH3BQL2 631 aa9.7□□□□□ -0.86
CNOT4-212ENST00000541284 STRNO43815 780 aa9.7□□□□□ -0.86
CNOT4-212ENST00000541284 SNUPNO95149 360 aaKnown RBP9.7□□□□□ -0.86
CNOT4-212ENST00000541284 XRCC1P18887 633 aaPredicted RBP9.7□□□□□ -0.86
CNOT4-212ENST00000541284 NME3Q13232 169 aa9.7□□□□□ -0.86
CNOT4-212ENST00000541284 EIF4EBP2Q13542 120 aaPredicted RBP9.7□□□□□ -0.86
CNOT4-212ENST00000541284 DUSP28Q4G0W2 176 aa9.7□□□□□ -0.86
CNOT4-212ENST00000541284 TMEM198Q66K66 360 aa9.7□□□□□ -0.86
CNOT4-212ENST00000541284 DENND5AQ6IQ26 1287 aa9.7□□□□□ -0.86
CNOT4-212ENST00000541284 CATSPER4Q7RTX7 472 aa9.7□□□□□ -0.86
CNOT4-212ENST00000541284 CNTN4Q8IWV2 1026 aa9.7□□□□□ -0.86
CNOT4-212ENST00000541284 TOP6BLQ8N6T0 577 aa9.7□□□□□ -0.86
CNOT4-212ENST00000541284 APPL2Q8NEU8 664 aa9.7□□□□□ -0.86
CNOT4-212ENST00000541284 APOL2Q9BQE5 337 aa9.7□□□□□ -0.86
CNOT4-212ENST00000541284 KIFC1Q9BW19 673 aa9.7□□□□□ -0.86
CNOT4-212ENST00000541284 ACE2Q9BYF1 805 aaPredicted RBP9.7□□□□□ -0.86
CNOT4-212ENST00000541284 FAM49AQ9H0Q0 323 aaPredicted RBP9.7□□□□□ -0.86
CNOT4-212ENST00000541284 SNX25Q9H3E2 840 aa9.7□□□□□ -0.86
CNOT4-212ENST00000541284 TCF7L2Q9NQB0 619 aa9.7□□□□□ -0.86
CNOT4-212ENST00000541284 CPSF2Q9P2I0 782 aaKnown RBP9.7□□□□□ -0.86
CNOT4-212ENST00000541284 INPP5FQ9Y2H2 1132 aa9.7□□□□□ -0.86
CNOT4-212ENST00000541284 RAD54BQ9Y620 910 aa9.7□□□□□ -0.86
CNOT4-212ENST00000541284 ACOT8O14734 319 aa9.7□□□□□ -0.86
CNOT4-212ENST00000541284 DENRO43583 198 aaKnown RBP9.7□□□□□ -0.86
CNOT4-212ENST00000541284 DNAJA2O60884 412 aa9.7□□□□□ -0.86
CNOT4-212ENST00000541284 STK10O94804 968 aaKnown RBP9.7□□□□□ -0.86
CNOT4-212ENST00000541284 PTPN1P18031 435 aaKnown RBP9.7□□□□□ -0.86
CNOT4-212ENST00000541284 EPHA3P29320 983 aa9.7□□□□□ -0.86
CNOT4-212ENST00000541284 LRPAP1P30533 357 aa9.7□□□□□ -0.86
CNOT4-212ENST00000541284 GSTT1P30711 240 aa9.7□□□□□ -0.86
CNOT4-212ENST00000541284 GARSP41250 739 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms