RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 RAP2CQ9Y3L5 183 aa6.52□□□□□ -1.37
YBX3-210ENST00000540975 A0A0A0MQY5 61 aa6.51□□□□□ -1.37
YBX3-210ENST00000540975 BECN2A8MW95 431 aa6.51□□□□□ -1.37
YBX3-210ENST00000540975 SMAD6O43541 496 aaKnown RBP6.51□□□□□ -1.37
YBX3-210ENST00000540975 METTL18O95568 372 aa6.51□□□□□ -1.37
YBX3-210ENST00000540975 UNGP13051 313 aaPredicted RBP6.51□□□□□ -1.37
YBX3-210ENST00000540975 RFX2P48378 723 aa6.51□□□□□ -1.37
YBX3-210ENST00000540975 ARHGAP8P85298 464 aa6.51□□□□□ -1.37
YBX3-210ENST00000540975 CBWD5Q5RIA9 395 aa6.51□□□□□ -1.37
YBX3-210ENST00000540975 HERC6Q8IVU3 1022 aa6.51□□□□□ -1.37
YBX3-210ENST00000540975 TMEM57Q8N5G2 664 aa6.51□□□□□ -1.37
YBX3-210ENST00000540975 SCAIQ8N9R8 606 aa6.51□□□□□ -1.37
YBX3-210ENST00000540975 SPATA5Q8NB90 893 aa6.51□□□□□ -1.37
YBX3-210ENST00000540975 RBM17Q96I25 401 aaKnown RBP6.51□□□□□ -1.37
YBX3-210ENST00000540975 POLDIP3Q9BY77 421 aaKnown RBP6.51□□□□□ -1.37
YBX3-210ENST00000540975 ITM2CQ9NQX7 267 aa6.51□□□□□ -1.37
YBX3-210ENST00000540975 TLR8Q9NR97 1041 aaKnown RBP6.51□□□□□ -1.37
YBX3-210ENST00000540975 UPB1Q9UBR1 384 aa6.51□□□□□ -1.37
YBX3-210ENST00000540975 FEM1BQ9UK73 627 aa6.51□□□□□ -1.37
YBX3-210ENST00000540975 ICKQ9UPZ9 632 aa6.51□□□□□ -1.37
YBX3-210ENST00000540975 C17orf100A8MU93 164 aa6.5□□□□□ -1.37
YBX3-210ENST00000540975 STX16-NPEPL1H3BU86 382 aa6.5□□□□□ -1.37
YBX3-210ENST00000540975 STX16O14662 325 aa6.5□□□□□ -1.37
YBX3-210ENST00000540975 DDAH2O95865 285 aa6.5□□□□□ -1.37
YBX3-210ENST00000540975 CYP1A2P05177 515 aa6.5□□□□□ -1.37
YBX3-210ENST00000540975 TNNT1P13805 278 aa6.5□□□□□ -1.37
YBX3-210ENST00000540975 ARSBP15848 533 aa6.5□□□□□ -1.37
YBX3-210ENST00000540975 CHRNB2P17787 502 aa6.5□□□□□ -1.37
YBX3-210ENST00000540975 TKTP29401 623 aaKnown RBP6.5□□□□□ -1.37
YBX3-210ENST00000540975 ARL4CP56559 192 aa6.5□□□□□ -1.37
YBX3-210ENST00000540975 SELENOVP59797 346 aa6.5□□□□□ -1.37
YBX3-210ENST00000540975 BYSLQ13895 437 aaKnown RBP6.5□□□□□ -1.37
YBX3-210ENST00000540975 DUSP6Q16828 381 aa6.5□□□□□ -1.37
YBX3-210ENST00000540975 ADCK5Q3MIX3 580 aa6.5□□□□□ -1.37
YBX3-210ENST00000540975 SYTL3Q4VX76 610 aa6.5□□□□□ -1.37
YBX3-210ENST00000540975 DCAF12L2Q5VW00 463 aa6.5□□□□□ -1.37
YBX3-210ENST00000540975 TMEM71Q6P5X7 295 aa6.5□□□□□ -1.37
YBX3-210ENST00000540975 Q6ZTK2 550 aa6.5□□□□□ -1.37
YBX3-210ENST00000540975 OIT3Q8WWZ8 545 aa6.5□□□□□ -1.37
YBX3-210ENST00000540975 MASTLQ96GX5 879 aa6.5□□□□□ -1.37
YBX3-210ENST00000540975 IFT27Q9BW83 186 aa6.5□□□□□ -1.37
YBX3-210ENST00000540975 PLAC1Q9HBJ0 212 aa6.5□□□□□ -1.37
YBX3-210ENST00000540975 IGKV2D-30A0A075B6S6 120 aa6.49□□□□□ -1.37
YBX3-210ENST00000540975 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.49□□□□□ -1.37
YBX3-210ENST00000540975 TARSL2A2RTX5 802 aaKnown RBP6.49□□□□□ -1.37
YBX3-210ENST00000540975 HSPB6O14558 160 aa6.49□□□□□ -1.37
YBX3-210ENST00000540975 RXRAP19793 462 aa6.49□□□□□ -1.37
YBX3-210ENST00000540975 MTNR1AP48039 350 aa6.49□□□□□ -1.37
YBX3-210ENST00000540975 TRAF1Q13077 416 aa6.49□□□□□ -1.37
YBX3-210ENST00000540975 CTXN3Q4LDR2 81 aa6.49□□□□□ -1.37
YBX3-210ENST00000540975 ANKRD45Q5TZF3 282 aa6.49□□□□□ -1.37
YBX3-210ENST00000540975 TRIM74Q86UV6 250 aa6.49□□□□□ -1.37
YBX3-210ENST00000540975 TRIM73Q86UV7 250 aa6.49□□□□□ -1.37
YBX3-210ENST00000540975 HORMAD2Q8N7B1 307 aa6.49□□□□□ -1.37
YBX3-210ENST00000540975 NCSTNQ92542 709 aa6.49□□□□□ -1.37
YBX3-210ENST00000540975 ZNF333Q96JL9 665 aa6.49□□□□□ -1.37
YBX3-210ENST00000540975 TEFMQ96QE5 360 aaKnown RBP6.49□□□□□ -1.37
YBX3-210ENST00000540975 KRCC1Q9NPI7 259 aaPredicted RBP6.49□□□□□ -1.37
YBX3-210ENST00000540975 HIF1ANQ9NWT6 349 aa6.49□□□□□ -1.37
YBX3-210ENST00000540975 INSL5Q9Y5Q6 135 aa6.49□□□□□ -1.37
YBX3-210ENST00000540975 MORC2Q9Y6X9 1032 aaPredicted RBP6.49□□□□□ -1.37
YBX3-210ENST00000540975 C17orf102A2RUQ5 167 aa6.48□□□□□ -1.37
YBX3-210ENST00000540975 IFRD1O00458 451 aaPredicted RBP6.48□□□□□ -1.37
YBX3-210ENST00000540975 RNMTO43148 476 aaKnown RBP6.48□□□□□ -1.37
YBX3-210ENST00000540975 GJC1P36383 396 aa6.48□□□□□ -1.37
YBX3-210ENST00000540975 SKIV2L2P42285 1042 aaKnown RBP6.48□□□□□ -1.37
YBX3-210ENST00000540975 RFX5P48382 616 aaPredicted RBP6.48□□□□□ -1.37
YBX3-210ENST00000540975 TMPRSS3P57727 454 aa6.48□□□□□ -1.37
YBX3-210ENST00000540975 GPR18Q14330 331 aa6.48□□□□□ -1.37
YBX3-210ENST00000540975 AP5B1Q2VPB7 878 aa6.48□□□□□ -1.37
YBX3-210ENST00000540975 SH2D4BQ5SQS7 431 aa6.48□□□□□ -1.37
YBX3-210ENST00000540975 WDR5BQ86VZ2 330 aa6.48□□□□□ -1.37
YBX3-210ENST00000540975 ZDHHC23Q8IYP9 409 aa6.48□□□□□ -1.37
YBX3-210ENST00000540975 BICD2Q8TD16 824 aa6.48□□□□□ -1.37
YBX3-210ENST00000540975 NTPCRQ9BSD7 190 aaKnown RBP6.48□□□□□ -1.37
YBX3-210ENST00000540975 HERPUD2Q9BSE4 406 aa6.48□□□□□ -1.37
YBX3-210ENST00000540975 SF3B5Q9BWJ5 86 aaKnown RBP6.48□□□□□ -1.37
YBX3-210ENST00000540975 KRTAP9-8Q9BYQ0 159 aa6.48□□□□□ -1.37
YBX3-210ENST00000540975 CTDSP1Q9GZU7 261 aa6.48□□□□□ -1.37
YBX3-210ENST00000540975 HIPK2Q9H2X6 1198 aa6.48□□□□□ -1.37
YBX3-210ENST00000540975 PLK2Q9NYY3 685 aa6.48□□□□□ -1.37
YBX3-210ENST00000540975 CD207Q9UJ71 328 aa6.48□□□□□ -1.37
YBX3-210ENST00000540975 PCDHA7Q9UN72 937 aa6.48□□□□□ -1.37
YBX3-210ENST00000540975 DHDHQ9UQ10 334 aa6.48□□□□□ -1.37
YBX3-210ENST00000540975 DNAJC16Q9Y2G8 782 aa6.48□□□□□ -1.37
YBX3-210ENST00000540975 SAC3D1A6NKF1 404 aa6.47□□□□□ -1.37
YBX3-210ENST00000540975 I6L893 689 aaPredicted RBP6.47□□□□□ -1.37
YBX3-210ENST00000540975 IKBKBO14920 756 aa6.47□□□□□ -1.37
YBX3-210ENST00000540975 IRAK2O43187 625 aa6.47□□□□□ -1.37
YBX3-210ENST00000540975 STRNO43815 780 aa6.47□□□□□ -1.37
YBX3-210ENST00000540975 DHX16O60231 1041 aaKnown RBP6.47□□□□□ -1.37
YBX3-210ENST00000540975 PIP5K1CO60331 668 aa6.47□□□□□ -1.37
YBX3-210ENST00000540975 LCATP04180 440 aa6.47□□□□□ -1.37
YBX3-210ENST00000540975 MYZAPP0CAP1 466 aa6.47□□□□□ -1.37
YBX3-210ENST00000540975 CPA1P15085 419 aa6.47□□□□□ -1.37
YBX3-210ENST00000540975 AVPR1AP37288 418 aa6.47□□□□□ -1.37
YBX3-210ENST00000540975 MLH1P40692 756 aa6.47□□□□□ -1.37
YBX3-210ENST00000540975 HALP42357 657 aa6.47□□□□□ -1.37
YBX3-210ENST00000540975 CLCNKBP51801 687 aa6.47□□□□□ -1.37
YBX3-210ENST00000540975 ZP1P60852 638 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms