RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 PANX2Q96RD6 677 aa9.43□□□□□ -0.9
SNHG1-215ENST00000540904 EIF3CQ99613 913 aaKnown RBP9.43□□□□□ -0.9
SNHG1-215ENST00000540904 OMDQ99983 421 aa9.43□□□□□ -0.9
SNHG1-215ENST00000540904 GPR174Q9BXC1 333 aa9.43□□□□□ -0.9
SNHG1-215ENST00000540904 ACE2Q9BYF1 805 aaPredicted RBP9.43□□□□□ -0.9
SNHG1-215ENST00000540904 TNKS2Q9H2K2 1166 aa9.43□□□□□ -0.9
SNHG1-215ENST00000540904 PABPC3Q9H361 631 aaKnown RBP9.43□□□□□ -0.9
SNHG1-215ENST00000540904 NOL6Q9H6R4 1146 aaKnown RBP9.43□□□□□ -0.9
SNHG1-215ENST00000540904 FBXL12Q9NXK8 326 aa9.43□□□□□ -0.9
SNHG1-215ENST00000540904 DONSONQ9NYP3 566 aa9.43□□□□□ -0.9
SNHG1-215ENST00000540904 WSB2Q9NYS7 404 aaPredicted RBP9.43□□□□□ -0.9
SNHG1-215ENST00000540904 CWC15Q9P013 229 aaKnown RBP9.43□□□□□ -0.9
SNHG1-215ENST00000540904 NCKAP1Q9Y2A7 1128 aa9.43□□□□□ -0.9
SNHG1-215ENST00000540904 ACTL7AQ9Y615 435 aa9.43□□□□□ -0.9
SNHG1-215ENST00000540904 ATXN2Q99700 1313 aaKnown RBP9.42□□□□□ -0.9
SNHG1-215ENST00000540904 A0A1W2PP55 124 aa9.42□□□□□ -0.9
SNHG1-215ENST00000540904 RASA4BC9J798 803 aa9.42□□□□□ -0.9
SNHG1-215ENST00000540904 H3BRJ5 948 aa9.42□□□□□ -0.9
SNHG1-215ENST00000540904 RASA4O43374 803 aa9.42□□□□□ -0.9
SNHG1-215ENST00000540904 BUB1O43683 1085 aa9.42□□□□□ -0.9
SNHG1-215ENST00000540904 KDELR3O43731 214 aa9.42□□□□□ -0.9
SNHG1-215ENST00000540904 RNASEH2AO75792 299 aaKnown RBP9.42□□□□□ -0.9
SNHG1-215ENST00000540904 ADH1BP00325 375 aa9.42□□□□□ -0.9
SNHG1-215ENST00000540904 ZNF806P0C7X5 589 aa9.42□□□□□ -0.9
SNHG1-215ENST00000540904 RARAP10276 462 aa9.42□□□□□ -0.9
SNHG1-215ENST00000540904 ERCC2P18074 760 aa9.42□□□□□ -0.9
SNHG1-215ENST00000540904 C5AR1P21730 350 aa9.42□□□□□ -0.9
SNHG1-215ENST00000540904 ITPKAP23677 461 aa9.42□□□□□ -0.9
SNHG1-215ENST00000540904 ACSL1P33121 698 aa9.42□□□□□ -0.9
SNHG1-215ENST00000540904 GJC1P36383 396 aa9.42□□□□□ -0.9
SNHG1-215ENST00000540904 ARL4AP40617 200 aa9.42□□□□□ -0.9
SNHG1-215ENST00000540904 RECQLP46063 649 aaPredicted RBP9.42□□□□□ -0.9
SNHG1-215ENST00000540904 DNA2P51530 1060 aa9.42□□□□□ -0.9
SNHG1-215ENST00000540904 YBEYP58557 167 aaPredicted RBP9.42□□□□□ -0.9
SNHG1-215ENST00000540904 SLC25A11Q02978 314 aaKnown RBP9.42□□□□□ -0.9
SNHG1-215ENST00000540904 SLC20A2Q08357 652 aa9.42□□□□□ -0.9
SNHG1-215ENST00000540904 MESDQ14696 234 aa9.42□□□□□ -0.9
SNHG1-215ENST00000540904 SF3A2Q15428 464 aaKnown RBP9.42□□□□□ -0.9
SNHG1-215ENST00000540904 HADHQ16836 314 aaKnown RBP9.42□□□□□ -0.9
SNHG1-215ENST00000540904 PARP15Q460N3 678 aa9.42□□□□□ -0.9
SNHG1-215ENST00000540904 PLA2G2CQ5R387 149 aa9.42□□□□□ -0.9
SNHG1-215ENST00000540904 SYCP2LQ5T4T6 812 aa9.42□□□□□ -0.9
SNHG1-215ENST00000540904 TCEAL6Q6IPX3 200 aa9.42□□□□□ -0.9
SNHG1-215ENST00000540904 C22orf39Q6P5X5 142 aa9.42□□□□□ -0.9
SNHG1-215ENST00000540904 CPNE8Q86YQ8 564 aa9.42□□□□□ -0.9
SNHG1-215ENST00000540904 SLC41A1Q8IVJ1 513 aa9.42□□□□□ -0.9
SNHG1-215ENST00000540904 RHOT2Q8IXI1 618 aa9.42□□□□□ -0.9
SNHG1-215ENST00000540904 CCDC170Q8IYT3 715 aa9.42□□□□□ -0.9
SNHG1-215ENST00000540904 RGL4Q8IZJ4 473 aa9.42□□□□□ -0.9
SNHG1-215ENST00000540904 UMODL1-AS1Q8N2C9 162 aa9.42□□□□□ -0.9
SNHG1-215ENST00000540904 HDDC3Q8N4P3 179 aa9.42□□□□□ -0.9
SNHG1-215ENST00000540904 AADATQ8N5Z0 425 aa9.42□□□□□ -0.9
SNHG1-215ENST00000540904 C12orf50Q8NA57 414 aaPredicted RBP9.42□□□□□ -0.9
SNHG1-215ENST00000540904 SPC24Q8NBT2 197 aa9.42□□□□□ -0.9
SNHG1-215ENST00000540904 OR2A12Q8NGT7 310 aa9.42□□□□□ -0.9
SNHG1-215ENST00000540904 TEKT4Q8WW24 435 aa9.42□□□□□ -0.9
SNHG1-215ENST00000540904 FOXJ1Q92949 421 aa9.42□□□□□ -0.9
SNHG1-215ENST00000540904 TCEAL3Q969E4 200 aa9.42□□□□□ -0.9
SNHG1-215ENST00000540904 CELF6Q96J87 481 aaKnown RBP9.42□□□□□ -0.9
SNHG1-215ENST00000540904 CCDC114Q96M63 670 aa9.42□□□□□ -0.9
SNHG1-215ENST00000540904 KLC2Q9H0B6 622 aa9.42□□□□□ -0.9
SNHG1-215ENST00000540904 BTBD1Q9H0C5 482 aa9.42□□□□□ -0.9
SNHG1-215ENST00000540904 NEUROG2Q9H2A3 272 aa9.42□□□□□ -0.9
SNHG1-215ENST00000540904 VPS45Q9NRW7 570 aa9.42□□□□□ -0.9
SNHG1-215ENST00000540904 TMEM74BQ9NUR3 256 aa9.42□□□□□ -0.9
SNHG1-215ENST00000540904 SERGEFQ9UGK8 458 aa9.42□□□□□ -0.9
SNHG1-215ENST00000540904 SCML1Q9UN30 329 aa9.42□□□□□ -0.9
SNHG1-215ENST00000540904 FCF1Q9Y324 198 aaKnown RBP9.42□□□□□ -0.9
SNHG1-215ENST00000540904 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.42□□□□□ -0.9
SNHG1-215ENST00000540904 USP34Q70CQ2 3546 aa9.42□□□□□ -0.9
SNHG1-215ENST00000540904 PIEZO1Q92508 2521 aa9.41□□□□□ -0.9
SNHG1-215ENST00000540904 ZSCAN5CA6NGD5 496 aaPredicted RBP9.41□□□□□ -0.9
SNHG1-215ENST00000540904 FAM47DPA6NHR8 397 aa9.41□□□□□ -0.9
SNHG1-215ENST00000540904 SOWAHDA6NJG2 315 aa9.41□□□□□ -0.9
SNHG1-215ENST00000540904 MEI4A8MW99 385 aa9.41□□□□□ -0.9
SNHG1-215ENST00000540904 DFFAO00273 331 aa9.41□□□□□ -0.9
SNHG1-215ENST00000540904 PLK4O00444 970 aa9.41□□□□□ -0.9
SNHG1-215ENST00000540904 MCF2LO15068 1137 aa9.41□□□□□ -0.9
SNHG1-215ENST00000540904 PROSCO94903 275 aa9.41□□□□□ -0.9
SNHG1-215ENST00000540904 SEMA4FO95754 770 aa9.41□□□□□ -0.9
SNHG1-215ENST00000540904 CD160O95971 181 aa9.41□□□□□ -0.9
SNHG1-215ENST00000540904 MAOBP27338 520 aa9.41□□□□□ -0.9
SNHG1-215ENST00000540904 CHRNA3P32297 505 aa9.41□□□□□ -0.9
SNHG1-215ENST00000540904 CYLC1P35663 651 aaPredicted RBP9.41□□□□□ -0.9
SNHG1-215ENST00000540904 HCAR3P49019 387 aa9.41□□□□□ -0.9
SNHG1-215ENST00000540904 PAPOLAP51003 745 aaKnown RBP9.41□□□□□ -0.9
SNHG1-215ENST00000540904 ZNF135P52742 658 aaPredicted RBP9.41□□□□□ -0.9
SNHG1-215ENST00000540904 NDST2P52849 883 aa9.41□□□□□ -0.9
SNHG1-215ENST00000540904 METAP1P53582 386 aa9.41□□□□□ -0.9
SNHG1-215ENST00000540904 CDH6P55285 790 aa9.41□□□□□ -0.9
SNHG1-215ENST00000540904 GEMIN4P57678 1058 aaKnown RBP9.41□□□□□ -0.9
SNHG1-215ENST00000540904 LMNB2Q03252 620 aa9.41□□□□□ -0.9
SNHG1-215ENST00000540904 SFSWAPQ12872 951 aaKnown RBP9.41□□□□□ -0.9
SNHG1-215ENST00000540904 SERINC3Q13530 473 aa9.41□□□□□ -0.9
SNHG1-215ENST00000540904 DPYSQ14117 519 aa9.41□□□□□ -0.9
SNHG1-215ENST00000540904 KRT81Q14533 505 aa9.41□□□□□ -0.9
SNHG1-215ENST00000540904 SPA17Q15506 151 aa9.41□□□□□ -0.9
SNHG1-215ENST00000540904 DPYSL2Q16555 572 aa9.41□□□□□ -0.9
SNHG1-215ENST00000540904 ATP13A4Q4VNC1 1196 aa9.41□□□□□ -0.9
SNHG1-215ENST00000540904 FAM46CQ5VWP2 391 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms