RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 CHST9Q7L1S5 443 aa10.86□□□□□ -0.67
ATL3-204ENST00000540699 IFT20Q8IY31 132 aa10.86□□□□□ -0.67
ATL3-204ENST00000540699 NAT16Q8N8M0 369 aa10.86□□□□□ -0.67
ATL3-204ENST00000540699 FIBINQ8TAL6 211 aa10.86□□□□□ -0.67
ATL3-204ENST00000540699 GRK7Q8WTQ7 553 aa10.86□□□□□ -0.67
ATL3-204ENST00000540699 BHMTQ93088 406 aa10.86□□□□□ -0.67
ATL3-204ENST00000540699 HAUS1Q96CS2 278 aa10.86□□□□□ -0.67
ATL3-204ENST00000540699 FAM118BQ9BPY3 351 aa10.86□□□□□ -0.67
ATL3-204ENST00000540699 ERP44Q9BS26 406 aa10.86□□□□□ -0.67
ATL3-204ENST00000540699 RAB17Q9H0T7 212 aa10.86□□□□□ -0.67
ATL3-204ENST00000540699 SEMA4AQ9H3S1 761 aa10.86□□□□□ -0.67
ATL3-204ENST00000540699 RETREG1Q9H6L5 497 aa10.86□□□□□ -0.67
ATL3-204ENST00000540699 LMAN1LQ9HAT1 526 aa10.86□□□□□ -0.67
ATL3-204ENST00000540699 EPB41L5Q9HCM4 733 aa10.86□□□□□ -0.67
ATL3-204ENST00000540699 ARGLU1Q9NWB6 273 aaPredicted RBP10.86□□□□□ -0.67
ATL3-204ENST00000540699 PPARGC1AQ9UBK2 798 aaKnown RBP10.86□□□□□ -0.67
ATL3-204ENST00000540699 ZNF212Q9UDV6 495 aa10.86□□□□□ -0.67
ATL3-204ENST00000540699 VANGL2Q9ULK5 521 aa10.86□□□□□ -0.67
ATL3-204ENST00000540699 NEU3Q9UQ49 428 aa10.86□□□□□ -0.67
ATL3-204ENST00000540699 STARD13Q9Y3M8 1113 aa10.86□□□□□ -0.67
ATL3-204ENST00000540699 NYNRINQ9P2P1 1898 aaKnown RBP10.86□□□□□ -0.67
ATL3-204ENST00000540699 TYW5A2RUC4 315 aaKnown RBP10.85□□□□□ -0.67
ATL3-204ENST00000540699 CHURC1-FNTBB4DL54 471 aa10.85□□□□□ -0.67
ATL3-204ENST00000540699 E9PAM4 449 aa10.85□□□□□ -0.67
ATL3-204ENST00000540699 FAM72CH0Y354 149 aa10.85□□□□□ -0.67
ATL3-204ENST00000540699 H3BRJ5 948 aa10.85□□□□□ -0.67
ATL3-204ENST00000540699 DCLK1O15075 740 aa10.85□□□□□ -0.67
ATL3-204ENST00000540699 LUC7L3O95232 432 aaKnown RBP10.85□□□□□ -0.67
ATL3-204ENST00000540699 ITGAVP06756 1048 aa10.85□□□□□ -0.67
ATL3-204ENST00000540699 ZFXP17010 805 aaPredicted RBP10.85□□□□□ -0.67
ATL3-204ENST00000540699 HLA-FP30511 346 aa10.85□□□□□ -0.67
ATL3-204ENST00000540699 HOXC13P31276 330 aa10.85□□□□□ -0.67
ATL3-204ENST00000540699 GGCXP38435 758 aa10.85□□□□□ -0.67
ATL3-204ENST00000540699 KIR2DL1P43626 348 aaPredicted RBP10.85□□□□□ -0.67
ATL3-204ENST00000540699 HCAR3P49019 387 aa10.85□□□□□ -0.67
ATL3-204ENST00000540699 CARSP49589 748 aaKnown RBP10.85□□□□□ -0.67
ATL3-204ENST00000540699 IRAK1P51617 712 aa10.85□□□□□ -0.67
ATL3-204ENST00000540699 BYSLQ13895 437 aaKnown RBP10.85□□□□□ -0.67
ATL3-204ENST00000540699 GAS6Q14393 721 aa10.85□□□□□ -0.67
ATL3-204ENST00000540699 KCTD19Q17RG1 926 aaPredicted RBP10.85□□□□□ -0.67
ATL3-204ENST00000540699 BEND6Q5SZJ8 279 aaPredicted RBP10.85□□□□□ -0.67
ATL3-204ENST00000540699 FAM72AQ5TYM5 149 aa10.85□□□□□ -0.67
ATL3-204ENST00000540699 NCBP2-AS2Q69YL0 99 aa10.85□□□□□ -0.67
ATL3-204ENST00000540699 FAM72DQ6L9T8 149 aa10.85□□□□□ -0.67
ATL3-204ENST00000540699 FAM72BQ86X60 149 aa10.85□□□□□ -0.67
ATL3-204ENST00000540699 SFTPA1Q8IWL2 248 aa10.85□□□□□ -0.67
ATL3-204ENST00000540699 CFAP52Q8N1V2 620 aa10.85□□□□□ -0.67
ATL3-204ENST00000540699 ALLCQ8N6M5 410 aa10.85□□□□□ -0.67
ATL3-204ENST00000540699 WFDC5Q8TCV5 224 aa10.85□□□□□ -0.67
ATL3-204ENST00000540699 KCNV2Q8TDN2 545 aa10.85□□□□□ -0.67
ATL3-204ENST00000540699 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.85□□□□□ -0.67
ATL3-204ENST00000540699 AENQ8WTP8 325 aaKnown RBP10.85□□□□□ -0.67
ATL3-204ENST00000540699 RPRD1AQ96P16 312 aaPredicted RBP10.85□□□□□ -0.67
ATL3-204ENST00000540699 HINFPQ9BQA5 517 aa10.85□□□□□ -0.67
ATL3-204ENST00000540699 MAK16Q9BXY0 300 aaKnown RBP10.85□□□□□ -0.67
ATL3-204ENST00000540699 SIK2Q9H0K1 926 aa10.85□□□□□ -0.67
ATL3-204ENST00000540699 ETNK2Q9NVF9 386 aa10.85□□□□□ -0.67
ATL3-204ENST00000540699 SAE1Q9UBE0 346 aaPredicted RBP10.85□□□□□ -0.67
ATL3-204ENST00000540699 OR12D3Q9UGF7 316 aa10.85□□□□□ -0.67
ATL3-204ENST00000540699 FEZ2Q9UHY8 353 aaPredicted RBP10.85□□□□□ -0.67
ATL3-204ENST00000540699 TBC1D30Q9Y2I9 924 aa10.85□□□□□ -0.67
ATL3-204ENST00000540699 UTP11Q9Y3A2 253 aaKnown RBP10.85□□□□□ -0.67
ATL3-204ENST00000540699 SNX10Q9Y5X0 201 aa10.85□□□□□ -0.67
ATL3-204ENST00000540699 GPR179Q6PRD1 2367 aa10.84□□□□□ -0.67
ATL3-204ENST00000540699 PRRT4C9JH25 899 aa10.84□□□□□ -0.67
ATL3-204ENST00000540699 EEF2KO00418 725 aaKnown RBP10.84□□□□□ -0.67
ATL3-204ENST00000540699 DAPK3O43293 454 aa10.84□□□□□ -0.67
ATL3-204ENST00000540699 CLDN11O75508 207 aa10.84□□□□□ -0.67
ATL3-204ENST00000540699 LRIG2O94898 1065 aa10.84□□□□□ -0.67
ATL3-204ENST00000540699 AMPD1P23109 780 aa10.84□□□□□ -0.67
ATL3-204ENST00000540699 IVDP26440 423 aa10.84□□□□□ -0.67
ATL3-204ENST00000540699 HTR7P34969 479 aa10.84□□□□□ -0.67
ATL3-204ENST00000540699 ARL4AP40617 200 aa10.84□□□□□ -0.67
ATL3-204ENST00000540699 PLK1P53350 603 aa10.84□□□□□ -0.67
ATL3-204ENST00000540699 CDH4P55283 916 aa10.84□□□□□ -0.67
ATL3-204ENST00000540699 MRPS21P82921 87 aaKnown RBP10.84□□□□□ -0.67
ATL3-204ENST00000540699 LMNB2Q03252 620 aa10.84□□□□□ -0.67
ATL3-204ENST00000540699 KDSRQ06136 332 aa10.84□□□□□ -0.67
ATL3-204ENST00000540699 SLC10A2Q12908 348 aaPredicted RBP10.84□□□□□ -0.67
ATL3-204ENST00000540699 CUL1Q13616 776 aa10.84□□□□□ -0.67
ATL3-204ENST00000540699 EIF4HQ15056 248 aaKnown RBP10.84□□□□□ -0.67
ATL3-204ENST00000540699 PAFAH1B3Q15102 231 aaKnown RBP10.84□□□□□ -0.67
ATL3-204ENST00000540699 GEN1Q17RS7 908 aa10.84□□□□□ -0.67
ATL3-204ENST00000540699 CXorf57Q6NSI4 855 aaKnown RBP10.84□□□□□ -0.67
ATL3-204ENST00000540699 ZDHHC24Q6UX98 284 aa10.84□□□□□ -0.67
ATL3-204ENST00000540699 LRRC31Q6UY01 552 aa10.84□□□□□ -0.67
ATL3-204ENST00000540699 RFX8Q6ZV50 586 aa10.84□□□□□ -0.67
ATL3-204ENST00000540699 NUDT18Q6ZVK8 323 aa10.84□□□□□ -0.67
ATL3-204ENST00000540699 C1orf210Q8IVY1 113 aa10.84□□□□□ -0.67
ATL3-204ENST00000540699 MFN1Q8IWA4 741 aa10.84□□□□□ -0.67
ATL3-204ENST00000540699 GSPT2Q8IYD1 628 aaKnown RBP10.84□□□□□ -0.67
ATL3-204ENST00000540699 WFIKKN2Q8TEU8 576 aa10.84□□□□□ -0.67
ATL3-204ENST00000540699 USP33Q8TEY7 942 aa10.84□□□□□ -0.67
ATL3-204ENST00000540699 OLFM3Q96PB7 478 aa10.84□□□□□ -0.67
ATL3-204ENST00000540699 NEUROG2Q9H2A3 272 aa10.84□□□□□ -0.67
ATL3-204ENST00000540699 FAM114A2Q9NRY5 505 aa10.84□□□□□ -0.67
ATL3-204ENST00000540699 ZNF446Q9NWS9 450 aa10.84□□□□□ -0.67
ATL3-204ENST00000540699 GRHL1Q9NZI5 618 aa10.84□□□□□ -0.67
ATL3-204ENST00000540699 HCN2Q9UL51 889 aa10.84□□□□□ -0.67
ATL3-204ENST00000540699 MFHAS1Q9Y4C4 1052 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms