RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 KATNAL1Q9BW62 490 aa11.25□□□□□ -0.61
PBX1-212ENST00000540236 NUAK2Q9H093 628 aa11.25□□□□□ -0.61
PBX1-212ENST00000540236 KCNK13Q9HB14 408 aa11.25□□□□□ -0.61
PBX1-212ENST00000540236 ERGIC3Q9Y282 383 aa11.25□□□□□ -0.61
PBX1-212ENST00000540236 MATN1P21941 496 aa11.25□□□□□ -0.61
PBX1-212ENST00000540236 HK2P52789 917 aa11.25□□□□□ -0.61
PBX1-212ENST00000540236 BCAT1P54687 386 aa11.25□□□□□ -0.61
PBX1-212ENST00000540236 SRP54P61011 504 aaKnown RBP11.25□□□□□ -0.61
PBX1-212ENST00000540236 PPP2R2BQ00005 443 aa11.25□□□□□ -0.61
PBX1-212ENST00000540236 DPYSQ14117 519 aa11.25□□□□□ -0.61
PBX1-212ENST00000540236 TBRG1Q3YBR2 411 aa11.25□□□□□ -0.61
PBX1-212ENST00000540236 PARP10Q53GL7 1025 aa11.25□□□□□ -0.61
PBX1-212ENST00000540236 C6orf10Q5SRN2 563 aa11.25□□□□□ -0.61
PBX1-212ENST00000540236 DENND5AQ6IQ26 1287 aa11.25□□□□□ -0.61
PBX1-212ENST00000540236 TAF2Q6P1X5 1199 aa11.25□□□□□ -0.61
PBX1-212ENST00000540236 SLFN11Q7Z7L1 901 aa11.25□□□□□ -0.61
PBX1-212ENST00000540236 FBXO11Q86XK2 927 aa11.25□□□□□ -0.61
PBX1-212ENST00000540236 UNC5BQ8IZJ1 945 aa11.25□□□□□ -0.61
PBX1-212ENST00000540236 CADM3Q8N126 398 aa11.25□□□□□ -0.61
PBX1-212ENST00000540236 ZFP90Q8TF47 636 aa11.25□□□□□ -0.61
PBX1-212ENST00000540236 GPRC5CQ9NQ84 441 aa11.25□□□□□ -0.61
PBX1-212ENST00000540236 KLHL8Q9P2G9 620 aaPredicted RBP11.25□□□□□ -0.61
PBX1-212ENST00000540236 SEPT9Q9UHD8 586 aaPredicted RBP11.25□□□□□ -0.61
PBX1-212ENST00000540236 CHD2O14647 1828 aaKnown RBP11.25□□□□□ -0.61
PBX1-212ENST00000540236 H3BNX3 289 aa11.24□□□□□ -0.61
PBX1-212ENST00000540236 TPPPO94811 219 aa11.24□□□□□ -0.61
PBX1-212ENST00000540236 HNRNPLP14866 589 aaKnown RBP eCLIP11.24□□□□□ -0.61
PBX1-212ENST00000540236 ATF3P18847 181 aa11.24□□□□□ -0.61
PBX1-212ENST00000540236 EPHX2P34913 555 aa11.24□□□□□ -0.61
PBX1-212ENST00000540236 RAP1GAPP47736 663 aa11.24□□□□□ -0.61
PBX1-212ENST00000540236 DBPQ10586 325 aaPredicted RBP11.24□□□□□ -0.61
PBX1-212ENST00000540236 HERC3Q15034 1050 aa11.24□□□□□ -0.61
PBX1-212ENST00000540236 MAPRE2Q15555 327 aa11.24□□□□□ -0.61
PBX1-212ENST00000540236 FAM102AQ5T9C2 384 aaPredicted RBP11.24□□□□□ -0.61
PBX1-212ENST00000540236 HEATR6Q6AI08 1181 aaKnown RBP11.24□□□□□ -0.61
PBX1-212ENST00000540236 UBA3Q8TBC4 463 aa11.24□□□□□ -0.61
PBX1-212ENST00000540236 EMID1Q96A84 441 aaPredicted RBP11.24□□□□□ -0.61
PBX1-212ENST00000540236 SLITRK1Q96PX8 696 aa11.24□□□□□ -0.61
PBX1-212ENST00000540236 CDH19Q9H159 772 aa11.24□□□□□ -0.61
PBX1-212ENST00000540236 SQORQ9Y6N5 450 aa11.24□□□□□ -0.61
PBX1-212ENST00000540236 MED26O95402 600 aa11.24□□□□□ -0.61
PBX1-212ENST00000540236 ABHD2P08910 425 aa11.24□□□□□ -0.61
PBX1-212ENST00000540236 MAP2K4P45985 399 aa11.24□□□□□ -0.61
PBX1-212ENST00000540236 PRKCQQ04759 706 aa11.24□□□□□ -0.61
PBX1-212ENST00000540236 DPYSL3Q14195 570 aa11.24□□□□□ -0.61
PBX1-212ENST00000540236 SNRNP35Q16560 246 aaKnown RBP11.24□□□□□ -0.61
PBX1-212ENST00000540236 PYDC2Q56P42 97 aa11.24□□□□□ -0.61
PBX1-212ENST00000540236 ZNF57Q68EA5 555 aaPredicted RBP11.24□□□□□ -0.61
PBX1-212ENST00000540236 ANKRD26P1Q6NSI1 321 aa11.24□□□□□ -0.61
PBX1-212ENST00000540236 UBR7Q8N806 425 aa11.24□□□□□ -0.61
PBX1-212ENST00000540236 SLC38A10Q9HBR0 1119 aa11.24□□□□□ -0.61
PBX1-212ENST00000540236 TIMM22Q9Y584 194 aa11.24□□□□□ -0.61
PBX1-212ENST00000540236 MSL3P1P0C860 447 aa11.24□□□□□ -0.61
PBX1-212ENST00000540236 TPH1P17752 444 aa11.24□□□□□ -0.61
PBX1-212ENST00000540236 HSD17B4P51659 736 aa11.24□□□□□ -0.61
PBX1-212ENST00000540236 TATDN1Q6P1N9 297 aa11.24□□□□□ -0.61
PBX1-212ENST00000540236 DCAKDQ8WVC6 231 aa11.24□□□□□ -0.61
PBX1-212ENST00000540236 ORAI2Q96SN7 254 aa11.24□□□□□ -0.61
PBX1-212ENST00000540236 NPLQ9BXD5 320 aaPredicted RBP11.24□□□□□ -0.61
PBX1-212ENST00000540236 IL17RBQ9NRM6 502 aa11.24□□□□□ -0.61
PBX1-212ENST00000540236 MRPL39Q9NYK5 338 aaKnown RBP11.24□□□□□ -0.61
PBX1-212ENST00000540236 FAM8A1Q9UBU6 413 aa11.24□□□□□ -0.61
PBX1-212ENST00000540236 HESX1Q9UBX0 185 aa11.24□□□□□ -0.61
PBX1-212ENST00000540236 YARS2Q9Y2Z4 477 aaKnown RBP11.24□□□□□ -0.61
PBX1-212ENST00000540236 DNMT3AQ9Y6K1 912 aaPredicted RBP11.24□□□□□ -0.61
PBX1-212ENST00000540236 PTPRMP28827 1452 aa11.24□□□□□ -0.61
PBX1-212ENST00000540236 TMEM150BA6NC51 233 aa11.24□□□□□ -0.61
PBX1-212ENST00000540236 PLOD3O60568 738 aa11.24□□□□□ -0.61
PBX1-212ENST00000540236 PROSCO94903 275 aa11.24□□□□□ -0.61
PBX1-212ENST00000540236 MGAT1P26572 445 aa11.24□□□□□ -0.61
PBX1-212ENST00000540236 CACNB3P54284 484 aa11.24□□□□□ -0.61
PBX1-212ENST00000540236 TYSND1Q2T9J0 566 aa11.24□□□□□ -0.61
PBX1-212ENST00000540236 HAUS6Q7Z4H7 955 aa11.24□□□□□ -0.61
PBX1-212ENST00000540236 OR52B2Q96RD2 323 aa11.24□□□□□ -0.61
PBX1-212ENST00000540236 KCTD10Q9H3F6 313 aa11.24□□□□□ -0.61
PBX1-212ENST00000540236 ALG2Q9H553 416 aa11.24□□□□□ -0.61
PBX1-212ENST00000540236 ZNF696Q9H7X3 374 aa11.24□□□□□ -0.61
PBX1-212ENST00000540236 CCDC59Q9P031 241 aaKnown RBP11.24□□□□□ -0.61
PBX1-212ENST00000540236 CLRN2A0PK11 232 aa11.24□□□□□ -0.61
PBX1-212ENST00000540236 M0QYV0 167 aa11.24□□□□□ -0.61
PBX1-212ENST00000540236 FCER2P06734 321 aa11.24□□□□□ -0.61
PBX1-212ENST00000540236 GPC3P51654 580 aa11.24□□□□□ -0.61
PBX1-212ENST00000540236 SPANXN2Q5MJ10 180 aa11.24□□□□□ -0.61
PBX1-212ENST00000540236 PDZK1Q5T2W1 519 aa11.24□□□□□ -0.61
PBX1-212ENST00000540236 GPATCH4Q5T3I0 446 aaKnown RBP11.24□□□□□ -0.61
PBX1-212ENST00000540236 EFL1Q7Z2Z2 1120 aaKnown RBP11.24□□□□□ -0.61
PBX1-212ENST00000540236 LGI2Q8N0V4 545 aa11.24□□□□□ -0.61
PBX1-212ENST00000540236 ZNF540Q8NDQ6 660 aa11.24□□□□□ -0.61
PBX1-212ENST00000540236 B3GALT6Q96L58 329 aa11.24□□□□□ -0.61
PBX1-212ENST00000540236 AS3MTQ9HBK9 375 aa11.24□□□□□ -0.61
PBX1-212ENST00000540236 RASSF1Q9NS23 344 aa11.24□□□□□ -0.61
PBX1-212ENST00000540236 PREX1Q8TCU6 1659 aa11.23□□□□□ -0.61
PBX1-212ENST00000540236 DENND3A2RUS2 1198 aa11.23□□□□□ -0.61
PBX1-212ENST00000540236 ISPDA4D126 451 aa11.23□□□□□ -0.61
PBX1-212ENST00000540236 EI24O14681 340 aa11.23□□□□□ -0.61
PBX1-212ENST00000540236 UBDO15205 165 aa11.23□□□□□ -0.61
PBX1-212ENST00000540236 PGLSO95336 258 aa11.23□□□□□ -0.61
PBX1-212ENST00000540236 SLC7A2P52569 658 aa11.23□□□□□ -0.61
PBX1-212ENST00000540236 JAM2P57087 298 aa11.23□□□□□ -0.61
PBX1-212ENST00000540236 TRIP4Q15650 581 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms