RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 SLC6A4P31645 630 aa12.01□□□□□ -0.49
VTN-202ENST00000539746 CCR2P41597 374 aa12.01□□□□□ -0.49
VTN-202ENST00000539746 CSNK1DP48730 415 aa12.01□□□□□ -0.49
VTN-202ENST00000539746 NPY2RP49146 381 aa12.01□□□□□ -0.49
VTN-202ENST00000539746 VPS41P49754 854 aa12.01□□□□□ -0.49
VTN-202ENST00000539746 PMS2P54278 862 aa12.01□□□□□ -0.49
VTN-202ENST00000539746 RPL26P61254 145 aaKnown RBP12.01□□□□□ -0.49
VTN-202ENST00000539746 ITKQ08881 620 aa12.01□□□□□ -0.49
VTN-202ENST00000539746 IFFO1Q0D2I5 559 aa12.01□□□□□ -0.49
VTN-202ENST00000539746 FCHO2Q0JRZ9 810 aa12.01□□□□□ -0.49
VTN-202ENST00000539746 CCDC15Q0P6D6 951 aa12.01□□□□□ -0.49
VTN-202ENST00000539746 CDH17Q12864 832 aa12.01□□□□□ -0.49
VTN-202ENST00000539746 SLC5A9Q2M3M2 681 aa12.01□□□□□ -0.49
VTN-202ENST00000539746 ZNF449Q6P9G9 518 aa12.01□□□□□ -0.49
VTN-202ENST00000539746 RFWD3Q6PCD5 774 aa12.01□□□□□ -0.49
VTN-202ENST00000539746 SYCE2Q6PIF2 218 aa12.01□□□□□ -0.49
VTN-202ENST00000539746 TAOK1Q7L7X3 1001 aa12.01□□□□□ -0.49
VTN-202ENST00000539746 ANKS1BQ7Z6G8 1248 aa12.01□□□□□ -0.49
VTN-202ENST00000539746 C14orf80Q86SX3 495 aa12.01□□□□□ -0.49
VTN-202ENST00000539746 ARHGAP12Q8IWW6 846 aa12.01□□□□□ -0.49
VTN-202ENST00000539746 PLPP6Q8IY26 295 aa12.01□□□□□ -0.49
VTN-202ENST00000539746 NPWQ8N729 165 aa12.01□□□□□ -0.49
VTN-202ENST00000539746 DNAAF3Q8N9W5 541 aa12.01□□□□□ -0.49
VTN-202ENST00000539746 ATP11CQ8NB49 1132 aa12.01□□□□□ -0.49
VTN-202ENST00000539746 SMRP1Q8NCR6 262 aa12.01□□□□□ -0.49
VTN-202ENST00000539746 CSGALNACT1Q8TDX6 532 aa12.01□□□□□ -0.49
VTN-202ENST00000539746 AENQ8WTP8 325 aaKnown RBP12.01□□□□□ -0.49
VTN-202ENST00000539746 TCEAL4Q96EI5 215 aa12.01□□□□□ -0.49
VTN-202ENST00000539746 IFT43Q96FT9 208 aa12.01□□□□□ -0.49
VTN-202ENST00000539746 HMCESQ96FZ2 354 aa12.01□□□□□ -0.49
VTN-202ENST00000539746 CELF6Q96J87 481 aaKnown RBP12.01□□□□□ -0.49
VTN-202ENST00000539746 PSKH2Q96QS6 385 aa12.01□□□□□ -0.49
VTN-202ENST00000539746 RBM15Q96T37 977 aaKnown RBP eCLIP12.01□□□□□ -0.49
VTN-202ENST00000539746 PNKPQ96T60 521 aa12.01□□□□□ -0.49
VTN-202ENST00000539746 FEM1AQ9BSK4 669 aa12.01□□□□□ -0.49
VTN-202ENST00000539746 TRMT61BQ9BVS5 477 aaKnown RBP12.01□□□□□ -0.49
VTN-202ENST00000539746 IL22Q9GZX6 179 aa12.01□□□□□ -0.49
VTN-202ENST00000539746 GLOD4Q9HC38 313 aa12.01□□□□□ -0.49
VTN-202ENST00000539746 ANLNQ9NQW6 1124 aa12.01□□□□□ -0.49
VTN-202ENST00000539746 TMPRSS4Q9NRS4 437 aa12.01□□□□□ -0.49
VTN-202ENST00000539746 DEC1Q9P2X7 70 aa12.01□□□□□ -0.49
VTN-202ENST00000539746 RPL26L1Q9UNX3 145 aaKnown RBP12.01□□□□□ -0.49
VTN-202ENST00000539746 PLA2G4CQ9UP65 541 aa12.01□□□□□ -0.49
VTN-202ENST00000539746 SLC27A6Q9Y2P4 619 aa12.01□□□□□ -0.49
VTN-202ENST00000539746 IKBKGQ9Y6K9 419 aa12.01□□□□□ -0.49
VTN-202ENST00000539746 EPOPA6NHQ4 379 aa12□□□□□ -0.49
VTN-202ENST00000539746 SDR42E2A6NKP2 422 aa12□□□□□ -0.49
VTN-202ENST00000539746 NEDD8-MDP1E9PL57 170 aa12□□□□□ -0.49
VTN-202ENST00000539746 I6L893 689 aaPredicted RBP12□□□□□ -0.49
VTN-202ENST00000539746 CBX4O00257 560 aa12□□□□□ -0.49
VTN-202ENST00000539746 GFRA2O00451 464 aa12□□□□□ -0.49
VTN-202ENST00000539746 PFDN6O15212 129 aa12□□□□□ -0.49
VTN-202ENST00000539746 CACNG3O60359 315 aa12□□□□□ -0.49
VTN-202ENST00000539746 GREM1O60565 184 aa12□□□□□ -0.49
VTN-202ENST00000539746 TSPAN3O60637 253 aa12□□□□□ -0.49
VTN-202ENST00000539746 CNTN5O94779 1100 aa12□□□□□ -0.49
VTN-202ENST00000539746 SUN1O94901 812 aa12□□□□□ -0.49
VTN-202ENST00000539746 IGSF6O95976 241 aa12□□□□□ -0.49
VTN-202ENST00000539746 CPP00450 1065 aa12□□□□□ -0.49
VTN-202ENST00000539746 SRPRAP08240 638 aaKnown RBP12□□□□□ -0.49
VTN-202ENST00000539746 ABHD2P08910 425 aa12□□□□□ -0.49
VTN-202ENST00000539746 LAMP2P13473 410 aa12□□□□□ -0.49
VTN-202ENST00000539746 TYRP14679 529 aa12□□□□□ -0.49
VTN-202ENST00000539746 GLULP15104 373 aa12□□□□□ -0.49
VTN-202ENST00000539746 HLA-DPA1P20036 260 aa12□□□□□ -0.49
VTN-202ENST00000539746 STX2P32856 288 aa12□□□□□ -0.49
VTN-202ENST00000539746 CARSP49589 748 aaKnown RBP12□□□□□ -0.49
VTN-202ENST00000539746 DGKGP49619 791 aa12□□□□□ -0.49
VTN-202ENST00000539746 SNRPD1P62314 119 aaKnown RBP12□□□□□ -0.49
VTN-202ENST00000539746 RPS24P62847 133 aaKnown RBP12□□□□□ -0.49
VTN-202ENST00000539746 DHX9Q08211 1270 aaKnown RBP12□□□□□ -0.49
VTN-202ENST00000539746 SFSWAPQ12872 951 aaKnown RBP12□□□□□ -0.49
VTN-202ENST00000539746 SLC10A2Q12908 348 aaPredicted RBP12□□□□□ -0.49
VTN-202ENST00000539746 CCDC38Q502W7 563 aa12□□□□□ -0.49
VTN-202ENST00000539746 ALFQ53S48 1182 aa12□□□□□ -0.49
VTN-202ENST00000539746 FAM78AQ5JUQ0 283 aa12□□□□□ -0.49
VTN-202ENST00000539746 LGSNQ5TDP6 509 aa12□□□□□ -0.49
VTN-202ENST00000539746 LRRC8BQ6P9F7 803 aa12□□□□□ -0.49
VTN-202ENST00000539746 POTEHQ6S545 545 aa12□□□□□ -0.49
VTN-202ENST00000539746 LRIG3Q6UXM1 1119 aa12□□□□□ -0.49
VTN-202ENST00000539746 TRMT11Q7Z4G4 463 aaKnown RBP12□□□□□ -0.49
VTN-202ENST00000539746 DSG4Q86SJ6 1040 aa12□□□□□ -0.49
VTN-202ENST00000539746 PALM2Q8IXS6 379 aa12□□□□□ -0.49
VTN-202ENST00000539746 ZDHHC14Q8IZN3 488 aa12□□□□□ -0.49
VTN-202ENST00000539746 ADGRG2Q8IZP9 1017 aa12□□□□□ -0.49
VTN-202ENST00000539746 ZNF567Q8N184 647 aa12□□□□□ -0.49
VTN-202ENST00000539746 PCDH20Q8N6Y1 951 aaKnown RBP12□□□□□ -0.49
VTN-202ENST00000539746 PAF1Q8N7H5 531 aa12□□□□□ -0.49
VTN-202ENST00000539746 C12orf76Q8N812 135 aaPredicted RBP12□□□□□ -0.49
VTN-202ENST00000539746 DDX51Q8N8A6 666 aaKnown RBP eCLIP12□□□□□ -0.49
VTN-202ENST00000539746 FBXO25Q8TCJ0 367 aa12□□□□□ -0.49
VTN-202ENST00000539746 KCNV2Q8TDN2 545 aa12□□□□□ -0.49
VTN-202ENST00000539746 PYROXD1Q8WU10 500 aa12□□□□□ -0.49
VTN-202ENST00000539746 ING5Q8WYH8 240 aa12□□□□□ -0.49
VTN-202ENST00000539746 CDKL2Q92772 493 aa12□□□□□ -0.49
VTN-202ENST00000539746 PEX13Q92968 403 aa12□□□□□ -0.49
VTN-202ENST00000539746 LRIG1Q96JA1 1093 aa12□□□□□ -0.49
VTN-202ENST00000539746 PRICKLE1Q96MT3 831 aaPredicted RBP12□□□□□ -0.49
VTN-202ENST00000539746 TUBGCP5Q96RT8 1024 aa12□□□□□ -0.49
VTN-202ENST00000539746 SLC22A12Q96S37 553 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms