RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 KIAA1522Q9P206 1035 aaPredicted RBP16.49■□□□□ 0.23
TRAF3-204ENST00000539721 RSPH14Q9UHP6 348 aa16.49■□□□□ 0.23
TRAF3-204ENST00000539721 VPS28Q9UK41 221 aa16.49■□□□□ 0.23
TRAF3-204ENST00000539721 FARP1Q9Y4F1 1045 aaPredicted RBP16.49■□□□□ 0.23
TRAF3-204ENST00000539721 CBX4O00257 560 aa16.48■□□□□ 0.23
TRAF3-204ENST00000539721 TP73O15350 636 aa16.48■□□□□ 0.23
TRAF3-204ENST00000539721 NFATC1O95644 943 aa16.48■□□□□ 0.23
TRAF3-204ENST00000539721 PEX11BO96011 259 aa16.48■□□□□ 0.23
TRAF3-204ENST00000539721 CYP17A1P05093 508 aa16.48■□□□□ 0.23
TRAF3-204ENST00000539721 FAM153BP0C7A2 387 aa16.48■□□□□ 0.23
TRAF3-204ENST00000539721 GLDCP23378 1020 aa16.48■□□□□ 0.23
TRAF3-204ENST00000539721 PSMB4P28070 264 aa16.48■□□□□ 0.23
TRAF3-204ENST00000539721 RENBPP51606 427 aa16.48■□□□□ 0.23
TRAF3-204ENST00000539721 LMAN2Q12907 356 aa16.48■□□□□ 0.23
TRAF3-204ENST00000539721 DHCR24Q15392 516 aa16.48■□□□□ 0.23
TRAF3-204ENST00000539721 PARP6Q2NL67 630 aa16.48■□□□□ 0.23
TRAF3-204ENST00000539721 FAM153CQ494X1 144 aa16.48■□□□□ 0.23
TRAF3-204ENST00000539721 TMCO4Q5TGY1 634 aa16.48■□□□□ 0.23
TRAF3-204ENST00000539721 MARC1Q5VT66 337 aa16.48■□□□□ 0.23
TRAF3-204ENST00000539721 YAF2Q8IY57 180 aa16.48■□□□□ 0.23
TRAF3-204ENST00000539721 ZNF557Q8N988 423 aaPredicted RBP16.48■□□□□ 0.23
TRAF3-204ENST00000539721 HNRNPLLQ8WVV9 542 aaKnown RBP16.48■□□□□ 0.23
TRAF3-204ENST00000539721 SUSD6Q92537 303 aa16.48■□□□□ 0.23
TRAF3-204ENST00000539721 ASIC4Q96FT7 647 aa16.48■□□□□ 0.23
TRAF3-204ENST00000539721 ZFYVE19Q96K21 471 aa16.48■□□□□ 0.23
TRAF3-204ENST00000539721 ZNF599Q96NL3 588 aa16.48■□□□□ 0.23
TRAF3-204ENST00000539721 KXD1Q9BQD3 176 aa16.48■□□□□ 0.23
TRAF3-204ENST00000539721 FEM1AQ9BSK4 669 aa16.48■□□□□ 0.23
TRAF3-204ENST00000539721 PDFQ9HBH1 243 aa16.48■□□□□ 0.23
TRAF3-204ENST00000539721 IGSF9Q9P2J2 1179 aa16.48■□□□□ 0.23
TRAF3-204ENST00000539721 FAM153AQ9UHL3 310 aa16.48■□□□□ 0.23
TRAF3-204ENST00000539721 SHOC2Q9UQ13 582 aa16.48■□□□□ 0.23
TRAF3-204ENST00000539721 TTLL3Q9Y4R7 772 aa16.48■□□□□ 0.23
TRAF3-204ENST00000539721 SZT2Q5T011 3432 aa16.47■□□□□ 0.23
TRAF3-204ENST00000539721 E7EVH7 732 aa16.47■□□□□ 0.23
TRAF3-204ENST00000539721 CHADO15335 359 aa16.47■□□□□ 0.23
TRAF3-204ENST00000539721 ADH1CP00326 375 aa16.47■□□□□ 0.23
TRAF3-204ENST00000539721 HLA-DQB2P05538 268 aa16.47■□□□□ 0.23
TRAF3-204ENST00000539721 NFKB1P19838 968 aa16.47■□□□□ 0.23
TRAF3-204ENST00000539721 KCNA5P22460 613 aa16.47■□□□□ 0.23
TRAF3-204ENST00000539721 CD70P32970 193 aa16.47■□□□□ 0.23
TRAF3-204ENST00000539721 CD68P34810 354 aaPredicted RBP16.47■□□□□ 0.23
TRAF3-204ENST00000539721 SLC10A7Q0GE19 358 aa16.47■□□□□ 0.23
TRAF3-204ENST00000539721 KCNJ11Q14654 390 aa16.47■□□□□ 0.23
TRAF3-204ENST00000539721 LBRQ14739 615 aaKnown RBP16.47■□□□□ 0.23
TRAF3-204ENST00000539721 SYCP2LQ5T4T6 812 aa16.47■□□□□ 0.23
TRAF3-204ENST00000539721 ANKRD22Q5VYY1 191 aa16.47■□□□□ 0.23
TRAF3-204ENST00000539721 EMBQ6PCB8 327 aa16.47■□□□□ 0.23
TRAF3-204ENST00000539721 HOOK3Q86VS8 718 aa16.47■□□□□ 0.23
TRAF3-204ENST00000539721 MFSD6LQ8IWD5 586 aa16.47■□□□□ 0.23
TRAF3-204ENST00000539721 CNTD1Q8N815 330 aa16.47■□□□□ 0.23
TRAF3-204ENST00000539721 NAT8LQ8N9F0 302 aa16.47■□□□□ 0.23
TRAF3-204ENST00000539721 PRCCQ92733 491 aaPredicted RBP16.47■□□□□ 0.23
TRAF3-204ENST00000539721 ATP2A3Q93084 1043 aa16.47■□□□□ 0.23
TRAF3-204ENST00000539721 ELSPBP1Q96BH3 223 aa16.47■□□□□ 0.23
TRAF3-204ENST00000539721 GBA3Q9H227 469 aa16.47■□□□□ 0.23
TRAF3-204ENST00000539721 UBE2ZQ9H832 354 aaPredicted RBP16.47■□□□□ 0.23
TRAF3-204ENST00000539721 ARFGAP3Q9NP61 516 aa16.47■□□□□ 0.23
TRAF3-204ENST00000539721 UBA2Q9UBT2 640 aaPredicted RBP16.47■□□□□ 0.23
TRAF3-204ENST00000539721 OR51B4Q9Y5P0 310 aa16.47■□□□□ 0.23
TRAF3-204ENST00000539721 SMAPO00193 183 aa16.46■□□□□ 0.23
TRAF3-204ENST00000539721 ADH5P11766 374 aa16.46■□□□□ 0.23
TRAF3-204ENST00000539721 ARSAP15289 507 aa16.46■□□□□ 0.23
TRAF3-204ENST00000539721 FOSL2P15408 326 aa16.46■□□□□ 0.23
TRAF3-204ENST00000539721 MMP13P45452 471 aa16.46■□□□□ 0.23
TRAF3-204ENST00000539721 LMAN1P49257 510 aa16.46■□□□□ 0.23
TRAF3-204ENST00000539721 GAD2Q05329 585 aa16.46■□□□□ 0.23
TRAF3-204ENST00000539721 SEMA5AQ13591 1074 aa16.46■□□□□ 0.23
TRAF3-204ENST00000539721 SLC12A1Q13621 1099 aa16.46■□□□□ 0.23
TRAF3-204ENST00000539721 GRM2Q14416 872 aa16.46■□□□□ 0.23
TRAF3-204ENST00000539721 PDGFRLQ15198 375 aa16.46■□□□□ 0.23
TRAF3-204ENST00000539721 GPR153Q6NV75 609 aa16.46■□□□□ 0.23
TRAF3-204ENST00000539721 PARM1Q6UWI2 310 aa16.46■□□□□ 0.23
TRAF3-204ENST00000539721 OTOP3Q7RTS5 596 aa16.46■□□□□ 0.23
TRAF3-204ENST00000539721 DCAF4L2Q8NA75 395 aa16.46■□□□□ 0.23
TRAF3-204ENST00000539721 PPM1EQ8WY54 764 aa16.46■□□□□ 0.23
TRAF3-204ENST00000539721 EXOC4Q96A65 974 aa16.46■□□□□ 0.23
TRAF3-204ENST00000539721 ALG14Q96F25 216 aa16.46■□□□□ 0.23
TRAF3-204ENST00000539721 GDAP1L1Q96MZ0 367 aa16.46■□□□□ 0.23
TRAF3-204ENST00000539721 PLA2G2FQ9BZM2 168 aa16.46■□□□□ 0.23
TRAF3-204ENST00000539721 EBF3Q9H4W6 596 aa16.46■□□□□ 0.23
TRAF3-204ENST00000539721 NT5MQ9NPB1 228 aa16.46■□□□□ 0.23
TRAF3-204ENST00000539721 ABCB8Q9NUT2 735 aa16.46■□□□□ 0.23
TRAF3-204ENST00000539721 BRWD1Q9NSI6 2320 aa16.46■□□□□ 0.23
TRAF3-204ENST00000539721 TCRBV7S3A2A0A539 114 aa16.46■□□□□ 0.22
TRAF3-204ENST00000539721 GRXCR2A6NFK2 248 aa16.46■□□□□ 0.22
TRAF3-204ENST00000539721 GOLGA8MH3BSY2 632 aa16.46■□□□□ 0.22
TRAF3-204ENST00000539721 SNAP91O60641 907 aa16.46■□□□□ 0.22
TRAF3-204ENST00000539721 APRTP07741 180 aa16.46■□□□□ 0.22
TRAF3-204ENST00000539721 SP100P23497 879 aaPredicted RBP16.46■□□□□ 0.22
TRAF3-204ENST00000539721 TNNT3P45378 269 aaPredicted RBP16.46■□□□□ 0.22
TRAF3-204ENST00000539721 FCHO2Q0JRZ9 810 aa16.46■□□□□ 0.22
TRAF3-204ENST00000539721 ZNF235Q14590 738 aa16.46■□□□□ 0.22
TRAF3-204ENST00000539721 PLEKHG6Q3KR16 790 aa16.46■□□□□ 0.22
TRAF3-204ENST00000539721 BEND6Q5SZJ8 279 aaPredicted RBP16.46■□□□□ 0.22
TRAF3-204ENST00000539721 MTSS1LQ765P7 747 aa16.46■□□□□ 0.22
TRAF3-204ENST00000539721 APCDD1Q8J025 514 aa16.46■□□□□ 0.22
TRAF3-204ENST00000539721 BBS5Q8N3I7 341 aa16.46■□□□□ 0.22
TRAF3-204ENST00000539721 TEX26Q8N6G2 289 aa16.46■□□□□ 0.22
TRAF3-204ENST00000539721 NAT16Q8N8M0 369 aa16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms