RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 CKBP12277 381 aa14.82□□□□□ -0.04
CDCA3-207ENST00000538862 ERCC2P18074 760 aa14.82□□□□□ -0.04
CDCA3-207ENST00000538862 PRDX6P30041 224 aa14.82□□□□□ -0.04
CDCA3-207ENST00000538862 LRPAP1P30533 357 aa14.82□□□□□ -0.04
CDCA3-207ENST00000538862 HOXC8P31273 242 aa14.82□□□□□ -0.04
CDCA3-207ENST00000538862 NDUFV1P49821 464 aa14.82□□□□□ -0.04
CDCA3-207ENST00000538862 ZNF135P52742 658 aaPredicted RBP14.82□□□□□ -0.04
CDCA3-207ENST00000538862 PPIDQ08752 370 aaKnown RBP14.82□□□□□ -0.04
CDCA3-207ENST00000538862 SEMA3BQ13214 749 aa14.82□□□□□ -0.04
CDCA3-207ENST00000538862 GSTA3Q16772 222 aa14.82□□□□□ -0.04
CDCA3-207ENST00000538862 TRIM71Q2Q1W2 868 aaKnown RBP14.82□□□□□ -0.04
CDCA3-207ENST00000538862 CLEC20AQ6ZU45 233 aa14.82□□□□□ -0.04
CDCA3-207ENST00000538862 Q7L0L9 218 aa14.82□□□□□ -0.04
CDCA3-207ENST00000538862 DCLK2Q8N568 766 aa14.82□□□□□ -0.04
CDCA3-207ENST00000538862 CMTM5Q96DZ9 223 aa14.82□□□□□ -0.04
CDCA3-207ENST00000538862 SYT15Q9BQS2 421 aa14.82□□□□□ -0.04
CDCA3-207ENST00000538862 RNF39Q9H2S5 420 aa14.82□□□□□ -0.04
CDCA3-207ENST00000538862 NDE1Q9NXR1 346 aa14.82□□□□□ -0.04
CDCA3-207ENST00000538862 COX16Q9P0S2 106 aa14.82□□□□□ -0.04
CDCA3-207ENST00000538862 CDY2AQ9Y6F7 541 aa14.82□□□□□ -0.04
CDCA3-207ENST00000538862 CDY1Q9Y6F8 540 aa14.82□□□□□ -0.04
CDCA3-207ENST00000538862 CLDN5O00501 218 aa14.82□□□□□ -0.04
CDCA3-207ENST00000538862 GABRDO14764 452 aa14.82□□□□□ -0.04
CDCA3-207ENST00000538862 H2AFYO75367 372 aaKnown RBP14.82□□□□□ -0.04
CDCA3-207ENST00000538862 NPY2RP49146 381 aa14.82□□□□□ -0.04
CDCA3-207ENST00000538862 TKTL1P51854 596 aa14.82□□□□□ -0.04
CDCA3-207ENST00000538862 ITGA9Q13797 1035 aa14.82□□□□□ -0.04
CDCA3-207ENST00000538862 KCTD11Q693B1 232 aa14.82□□□□□ -0.04
CDCA3-207ENST00000538862 PSRC1Q6PGN9 363 aaPredicted RBP14.82□□□□□ -0.04
CDCA3-207ENST00000538862 ATG14Q6ZNE5 492 aa14.82□□□□□ -0.04
CDCA3-207ENST00000538862 STRA8Q7Z7C7 330 aa14.82□□□□□ -0.04
CDCA3-207ENST00000538862 SERINC5Q86VE9 423 aa14.82□□□□□ -0.04
CDCA3-207ENST00000538862 NETO2Q8NC67 525 aa14.82□□□□□ -0.04
CDCA3-207ENST00000538862 SREK1Q8WXA9 508 aaKnown RBP14.82□□□□□ -0.04
CDCA3-207ENST00000538862 ZNF669Q96BR6 464 aaPredicted RBP14.82□□□□□ -0.04
CDCA3-207ENST00000538862 GORASP1Q9BQQ3 440 aa14.82□□□□□ -0.04
CDCA3-207ENST00000538862 GOLGA2P5Q9HBQ8 144 aa14.82□□□□□ -0.04
CDCA3-207ENST00000538862 SCOCQ9UIL1 159 aa14.82□□□□□ -0.04
CDCA3-207ENST00000538862 TRHDEQ9UKU6 1024 aa14.82□□□□□ -0.04
CDCA3-207ENST00000538862 ZCWPW2A0A1B0GU75 182 aa14.81□□□□□ -0.04
CDCA3-207ENST00000538862 MAGEA13PA6NCF6 341 aa14.81□□□□□ -0.04
CDCA3-207ENST00000538862 GRXCR1A8MXD5 290 aa14.81□□□□□ -0.04
CDCA3-207ENST00000538862 TMEM114B3SHH9 223 aa14.81□□□□□ -0.04
CDCA3-207ENST00000538862 KCNK1O00180 336 aa14.81□□□□□ -0.04
CDCA3-207ENST00000538862 FGBP02675 491 aa14.81□□□□□ -0.04
CDCA3-207ENST00000538862 CRABP2P29373 138 aa14.81□□□□□ -0.04
CDCA3-207ENST00000538862 ARRB2P32121 409 aa14.81□□□□□ -0.04
CDCA3-207ENST00000538862 THPOP40225 353 aa14.81□□□□□ -0.04
CDCA3-207ENST00000538862 CSE1LP55060 971 aaKnown RBP14.81□□□□□ -0.04
CDCA3-207ENST00000538862 TPI1P60174 286 aa14.81□□□□□ -0.04
CDCA3-207ENST00000538862 ADAM17P78536 824 aa14.81□□□□□ -0.04
CDCA3-207ENST00000538862 BTKQ06187 659 aa14.81□□□□□ -0.04
CDCA3-207ENST00000538862 GRIK3Q13003 919 aa14.81□□□□□ -0.04
CDCA3-207ENST00000538862 GPNMBQ14956 572 aa14.81□□□□□ -0.04
CDCA3-207ENST00000538862 ANKRD20A4Q4UJ75 823 aa14.81□□□□□ -0.04
CDCA3-207ENST00000538862 PDPK2PQ6A1A2 396 aa14.81□□□□□ -0.04
CDCA3-207ENST00000538862 ITPRIPL1Q6GPH6 555 aa14.81□□□□□ -0.04
CDCA3-207ENST00000538862 FSTL4Q6MZW2 842 aa14.81□□□□□ -0.04
CDCA3-207ENST00000538862 PGM2L1Q6PCE3 622 aa14.81□□□□□ -0.04
CDCA3-207ENST00000538862 CES3Q6UWW8 571 aa14.81□□□□□ -0.04
CDCA3-207ENST00000538862 LRRC8DQ7L1W4 858 aa14.81□□□□□ -0.04
CDCA3-207ENST00000538862 CLEC14AQ86T13 490 aa14.81□□□□□ -0.04
CDCA3-207ENST00000538862 ACTRT2Q8TDY3 377 aa14.81□□□□□ -0.04
CDCA3-207ENST00000538862 TMEM40Q8WWA1 233 aa14.81□□□□□ -0.04
CDCA3-207ENST00000538862 DNAJB3Q8WWF6 145 aa14.81□□□□□ -0.04
CDCA3-207ENST00000538862 PGAP3Q96FM1 320 aaPredicted RBP14.81□□□□□ -0.04
CDCA3-207ENST00000538862 NR1H4Q96RI1 486 aaPredicted RBP14.81□□□□□ -0.04
CDCA3-207ENST00000538862 VAT1Q99536 393 aa14.81□□□□□ -0.04
CDCA3-207ENST00000538862 WDR6Q9NNW5 1121 aaKnown RBP14.81□□□□□ -0.04
CDCA3-207ENST00000538862 FBXW11Q9UKB1 542 aa14.81□□□□□ -0.04
CDCA3-207ENST00000538862 IPPQ9Y573 584 aa14.81□□□□□ -0.04
CDCA3-207ENST00000538862 GBF1Q92538 1859 aa14.81□□□□□ -0.04
CDCA3-207ENST00000538862 MYO9BQ13459 2157 aa14.81□□□□□ -0.04
CDCA3-207ENST00000538862 EIF4E1BA6NMX2 242 aaKnown RBP14.8□□□□□ -0.04
CDCA3-207ENST00000538862 FAM72CH0Y354 149 aa14.8□□□□□ -0.04
CDCA3-207ENST00000538862 AP3B1O00203 1094 aa14.8□□□□□ -0.04
CDCA3-207ENST00000538862 TIMM44O43615 452 aa14.8□□□□□ -0.04
CDCA3-207ENST00000538862 FYNP06241 537 aa14.8□□□□□ -0.04
CDCA3-207ENST00000538862 CTSHP09668 335 aa14.8□□□□□ -0.04
CDCA3-207ENST00000538862 FAM200BP0CF97 657 aa14.8□□□□□ -0.04
CDCA3-207ENST00000538862 SELPP16109 830 aa14.8□□□□□ -0.04
CDCA3-207ENST00000538862 SP100P23497 879 aaPredicted RBP14.8□□□□□ -0.04
CDCA3-207ENST00000538862 DNAJB2P25686 324 aa14.8□□□□□ -0.04
CDCA3-207ENST00000538862 HADHAP40939 763 aa14.8□□□□□ -0.04
CDCA3-207ENST00000538862 SLC25A3Q00325 362 aa14.8□□□□□ -0.04
CDCA3-207ENST00000538862 ARL13BQ3SXY8 428 aa14.8□□□□□ -0.04
CDCA3-207ENST00000538862 FSCBQ5H9T9 825 aa14.8□□□□□ -0.04
CDCA3-207ENST00000538862 FAM72AQ5TYM5 149 aa14.8□□□□□ -0.04
CDCA3-207ENST00000538862 METTL21CQ5VZV1 264 aa14.8□□□□□ -0.04
CDCA3-207ENST00000538862 FAM72DQ6L9T8 149 aa14.8□□□□□ -0.04
CDCA3-207ENST00000538862 EPGNQ6UW88 154 aa14.8□□□□□ -0.04
CDCA3-207ENST00000538862 HFE2Q6ZVN8 426 aa14.8□□□□□ -0.04
CDCA3-207ENST00000538862 CMC1Q7Z7K0 106 aa14.8□□□□□ -0.04
CDCA3-207ENST00000538862 FAM72BQ86X60 149 aa14.8□□□□□ -0.04
CDCA3-207ENST00000538862 TP53INP2Q8IXH6 220 aa14.8□□□□□ -0.04
CDCA3-207ENST00000538862 DNAAF3Q8N9W5 541 aa14.8□□□□□ -0.04
CDCA3-207ENST00000538862 SMG8Q8ND04 991 aaKnown RBP14.8□□□□□ -0.04
CDCA3-207ENST00000538862 SLC7A14Q8TBB6 771 aa14.8□□□□□ -0.04
CDCA3-207ENST00000538862 GATA6Q92908 595 aa14.8□□□□□ -0.04
CDCA3-207ENST00000538862 HDAC11Q96DB2 347 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms