RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 UHRF1Q96T88 793 aaPredicted RBP23.97■■□□□ 1.43
TMEM260-202ENST00000538838 DDX47Q9H0S4 455 aaKnown RBP23.97■■□□□ 1.43
TMEM260-202ENST00000538838 SEPT10Q9P0V9 454 aa23.97■■□□□ 1.43
TMEM260-202ENST00000538838 UBA2Q9UBT2 640 aaPredicted RBP23.97■■□□□ 1.43
TMEM260-202ENST00000538838 SLC25A13Q9UJS0 675 aa23.97■■□□□ 1.43
TMEM260-202ENST00000538838 MT-CO1P00395 513 aa23.96■■□□□ 1.43
TMEM260-202ENST00000538838 EGFP01133 1207 aa23.96■■□□□ 1.43
TMEM260-202ENST00000538838 PRKCQQ04759 706 aa23.96■■□□□ 1.43
TMEM260-202ENST00000538838 SULT2A1Q06520 285 aa23.96■■□□□ 1.43
TMEM260-202ENST00000538838 HEATR6Q6AI08 1181 aaKnown RBP23.96■■□□□ 1.43
TMEM260-202ENST00000538838 RETSATQ6NUM9 610 aa23.96■■□□□ 1.43
TMEM260-202ENST00000538838 EXOC4Q96A65 974 aa23.96■■□□□ 1.43
TMEM260-202ENST00000538838 ZNF419Q96HQ0 510 aaPredicted RBP23.96■■□□□ 1.43
TMEM260-202ENST00000538838 CEP41Q9BYV8 373 aa23.96■■□□□ 1.43
TMEM260-202ENST00000538838 ERVW-1Q9UQF0 538 aa23.96■■□□□ 1.43
TMEM260-202ENST00000538838 ZNF148Q9UQR1 794 aa23.96■■□□□ 1.43
TMEM260-202ENST00000538838 BCLAF3A2AJT9 711 aaKnown RBP23.95■■□□□ 1.43
TMEM260-202ENST00000538838 ZSCAN5CA6NGD5 496 aaPredicted RBP23.95■■□□□ 1.43
TMEM260-202ENST00000538838 K7EQS6 105 aa23.95■■□□□ 1.43
TMEM260-202ENST00000538838 MATN3O15232 486 aa23.95■■□□□ 1.43
TMEM260-202ENST00000538838 KCNN4O15554 427 aa23.95■■□□□ 1.43
TMEM260-202ENST00000538838 SERPINH1P50454 418 aaKnown RBP23.95■■□□□ 1.43
TMEM260-202ENST00000538838 NRLP54845 237 aa23.95■■□□□ 1.43
TMEM260-202ENST00000538838 ZNF33AQ06730 810 aa23.95■■□□□ 1.43
TMEM260-202ENST00000538838 GRSF1Q12849 480 aaKnown RBP eCLIP23.95■■□□□ 1.43
TMEM260-202ENST00000538838 PTPRNQ16849 979 aa23.95■■□□□ 1.43
TMEM260-202ENST00000538838 KLHL7Q8IXQ5 586 aa23.95■■□□□ 1.43
TMEM260-202ENST00000538838 SIX5Q8N196 739 aa23.95■■□□□ 1.43
TMEM260-202ENST00000538838 USP33Q8TEY7 942 aa23.95■■□□□ 1.43
TMEM260-202ENST00000538838 HTR3CQ8WXA8 447 aa23.95■■□□□ 1.43
TMEM260-202ENST00000538838 MRGPRX3Q96LB0 322 aa23.95■■□□□ 1.43
TMEM260-202ENST00000538838 CCDC114Q96M63 670 aa23.95■■□□□ 1.43
TMEM260-202ENST00000538838 RRAGDQ9NQL2 400 aaPredicted RBP23.95■■□□□ 1.43
TMEM260-202ENST00000538838 NDRG2Q9UN36 371 aaKnown RBP23.95■■□□□ 1.43
TMEM260-202ENST00000538838 ATG2BQ96BY7 2078 aa23.95■■□□□ 1.42
TMEM260-202ENST00000538838 A0A0A0MRY4 1105 aa23.95■■□□□ 1.42
TMEM260-202ENST00000538838 CCDC188H7C350 402 aa23.95■■□□□ 1.42
TMEM260-202ENST00000538838 K7ERQ8 282 aa23.95■■□□□ 1.42
TMEM260-202ENST00000538838 MAN2B1O00754 1011 aa23.95■■□□□ 1.42
TMEM260-202ENST00000538838 ASLP04424 464 aa23.95■■□□□ 1.42
TMEM260-202ENST00000538838 ATP5BP06576 529 aaKnown RBP23.95■■□□□ 1.42
TMEM260-202ENST00000538838 DLDP09622 509 aaKnown RBP23.95■■□□□ 1.42
TMEM260-202ENST00000538838 COILP38432 576 aaPredicted RBP23.95■■□□□ 1.42
TMEM260-202ENST00000538838 GDF10P55107 478 aa23.95■■□□□ 1.42
TMEM260-202ENST00000538838 SEC13P55735 322 aa23.95■■□□□ 1.42
TMEM260-202ENST00000538838 SLC10A7Q0GE19 358 aa23.95■■□□□ 1.42
TMEM260-202ENST00000538838 ZBTB17Q13105 803 aa23.95■■□□□ 1.42
TMEM260-202ENST00000538838 KCTD19Q17RG1 926 aaPredicted RBP23.95■■□□□ 1.42
TMEM260-202ENST00000538838 TMCO4Q5TGY1 634 aa23.95■■□□□ 1.42
TMEM260-202ENST00000538838 CCDC137Q6PK04 289 aaKnown RBP23.95■■□□□ 1.42
TMEM260-202ENST00000538838 NUDT18Q6ZVK8 323 aa23.95■■□□□ 1.42
TMEM260-202ENST00000538838 MAML1Q92585 1016 aa23.95■■□□□ 1.42
TMEM260-202ENST00000538838 L2HGDHQ9H9P8 463 aa23.95■■□□□ 1.42
TMEM260-202ENST00000538838 ZDHHC4Q9NPG8 344 aa23.95■■□□□ 1.42
TMEM260-202ENST00000538838 HCN2Q9UL51 889 aa23.95■■□□□ 1.42
TMEM260-202ENST00000538838 SMAD6O43541 496 aaKnown RBP23.94■■□□□ 1.42
TMEM260-202ENST00000538838 ITGAVP06756 1048 aa23.94■■□□□ 1.42
TMEM260-202ENST00000538838 CCNB1P14635 433 aa23.94■■□□□ 1.42
TMEM260-202ENST00000538838 DRD1P21728 446 aa23.94■■□□□ 1.42
TMEM260-202ENST00000538838 FNTAP49354 379 aa23.94■■□□□ 1.42
TMEM260-202ENST00000538838 LBRQ14739 615 aaKnown RBP23.94■■□□□ 1.42
TMEM260-202ENST00000538838 EMC10Q5UCC4 262 aa23.94■■□□□ 1.42
TMEM260-202ENST00000538838 EGFLAMQ63HQ2 1017 aa23.94■■□□□ 1.42
TMEM260-202ENST00000538838 ZNF852Q6ZMS4 543 aa23.94■■□□□ 1.42
TMEM260-202ENST00000538838 FAM71DQ8N9W8 422 aa23.94■■□□□ 1.42
TMEM260-202ENST00000538838 ATP11CQ8NB49 1132 aa23.94■■□□□ 1.42
TMEM260-202ENST00000538838 FATE1Q969F0 183 aa23.94■■□□□ 1.42
TMEM260-202ENST00000538838 MYO19Q96H55 970 aa23.94■■□□□ 1.42
TMEM260-202ENST00000538838 ZNF599Q96NL3 588 aa23.94■■□□□ 1.42
TMEM260-202ENST00000538838 USP29Q9HBJ7 922 aa23.94■■□□□ 1.42
TMEM260-202ENST00000538838 HS3ST2Q9Y278 367 aa23.94■■□□□ 1.42
TMEM260-202ENST00000538838 FCF1Q9Y324 198 aaKnown RBP23.94■■□□□ 1.42
TMEM260-202ENST00000538838 MYO18AQ92614 2054 aaKnown RBP23.94■■□□□ 1.42
TMEM260-202ENST00000538838 SGK1O00141 431 aa23.93■■□□□ 1.42
TMEM260-202ENST00000538838 RNF103O00237 685 aa23.93■■□□□ 1.42
TMEM260-202ENST00000538838 TIMM44O43615 452 aa23.93■■□□□ 1.42
TMEM260-202ENST00000538838 TMCC1O94876 653 aa23.93■■□□□ 1.42
TMEM260-202ENST00000538838 SRCP12931 536 aa23.93■■□□□ 1.42
TMEM260-202ENST00000538838 PTPN3P26045 913 aa23.93■■□□□ 1.42
TMEM260-202ENST00000538838 CHRNA3P32297 505 aa23.93■■□□□ 1.42
TMEM260-202ENST00000538838 TNFRSF4P43489 277 aa23.93■■□□□ 1.42
TMEM260-202ENST00000538838 GEMIN4P57678 1058 aaKnown RBP23.93■■□□□ 1.42
TMEM260-202ENST00000538838 IFI35P80217 286 aaPredicted RBP23.93■■□□□ 1.42
TMEM260-202ENST00000538838 ZXDAP98168 799 aa23.93■■□□□ 1.42
TMEM260-202ENST00000538838 WASHC5Q12768 1159 aa23.93■■□□□ 1.42
TMEM260-202ENST00000538838 SH2D3CQ8N5H7 860 aa23.93■■□□□ 1.42
TMEM260-202ENST00000538838 NSMCE1Q8WV22 266 aa23.93■■□□□ 1.42
TMEM260-202ENST00000538838 UCMAQ8WVF2 138 aa23.93■■□□□ 1.42
TMEM260-202ENST00000538838 CARD6Q9BX69 1037 aa23.93■■□□□ 1.42
TMEM260-202ENST00000538838 SLCO3A1Q9UIG8 710 aa23.93■■□□□ 1.42
TMEM260-202ENST00000538838 SRPRAP08240 638 aaKnown RBP23.92■■□□□ 1.42
TMEM260-202ENST00000538838 ZNF234Q14588 700 aa23.92■■□□□ 1.42
TMEM260-202ENST00000538838 MARC1Q5VT66 337 aa23.92■■□□□ 1.42
TMEM260-202ENST00000538838 CCDC105Q8IYK2 499 aa23.92■■□□□ 1.42
TMEM260-202ENST00000538838 KRT12Q99456 494 aa23.92■■□□□ 1.42
TMEM260-202ENST00000538838 IL12RB2Q99665 862 aa23.92■■□□□ 1.42
TMEM260-202ENST00000538838 PLA2G4CQ9UP65 541 aa23.92■■□□□ 1.42
TMEM260-202ENST00000538838 DRG1Q9Y295 367 aaKnown RBP23.92■■□□□ 1.42
TMEM260-202ENST00000538838 STARD13Q9Y3M8 1113 aa23.92■■□□□ 1.42
TMEM260-202ENST00000538838 BDP1A6H8Y1 2624 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms