RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 THSD1Q9NS62 852 aa14.37□□□□□ -0.11
SMARCA4-206ENST00000538456 SATB2Q9UPW6 733 aa14.37□□□□□ -0.11
SMARCA4-206ENST00000538456 U3KQA8 63 aa14.37□□□□□ -0.11
SMARCA4-206ENST00000538456 COL27A1Q8IZC6 1860 aaPredicted RBP14.37□□□□□ -0.11
SMARCA4-206ENST00000538456 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.36□□□□□ -0.11
SMARCA4-206ENST00000538456 K7ESM1 405 aa14.36□□□□□ -0.11
SMARCA4-206ENST00000538456 LETM1O95202 739 aaPredicted RBP14.36□□□□□ -0.11
SMARCA4-206ENST00000538456 PCDH8O95206 1070 aa14.36□□□□□ -0.11
SMARCA4-206ENST00000538456 GP1BAP07359 652 aa14.36□□□□□ -0.11
SMARCA4-206ENST00000538456 SLC2A3P11169 496 aa14.36□□□□□ -0.11
SMARCA4-206ENST00000538456 CCR1P32246 355 aa14.36□□□□□ -0.11
SMARCA4-206ENST00000538456 VASPP50552 380 aaPredicted RBP14.36□□□□□ -0.11
SMARCA4-206ENST00000538456 VAC14Q08AM6 782 aa14.36□□□□□ -0.11
SMARCA4-206ENST00000538456 ZNF177Q13360 481 aaPredicted RBP14.36□□□□□ -0.11
SMARCA4-206ENST00000538456 AUHQ13825 339 aaKnown RBP14.36□□□□□ -0.11
SMARCA4-206ENST00000538456 CDKN3Q16667 212 aa14.36□□□□□ -0.11
SMARCA4-206ENST00000538456 SEL1L3Q68CR1 1132 aa14.36□□□□□ -0.11
SMARCA4-206ENST00000538456 GCNT7Q6ZNI0 430 aa14.36□□□□□ -0.11
SMARCA4-206ENST00000538456 ATP11CQ8NB49 1132 aa14.36□□□□□ -0.11
SMARCA4-206ENST00000538456 IFI44Q8TCB0 444 aa14.36□□□□□ -0.11
SMARCA4-206ENST00000538456 GRIN3AQ8TCU5 1115 aa14.36□□□□□ -0.11
SMARCA4-206ENST00000538456 WBP1Q96G27 269 aa14.36□□□□□ -0.11
SMARCA4-206ENST00000538456 KREMEN1Q96MU8 473 aa14.36□□□□□ -0.11
SMARCA4-206ENST00000538456 MED15Q96RN5 788 aa14.36□□□□□ -0.11
SMARCA4-206ENST00000538456 PPP1R9BQ96SB3 815 aa14.36□□□□□ -0.11
SMARCA4-206ENST00000538456 THAP9Q9H5L6 903 aa14.36□□□□□ -0.11
SMARCA4-206ENST00000538456 GDPD2Q9HCC8 539 aa14.36□□□□□ -0.11
SMARCA4-206ENST00000538456 DYRK4Q9NR20 520 aa14.36□□□□□ -0.11
SMARCA4-206ENST00000538456 ZFR2Q9UPR6 939 aaKnown RBP14.36□□□□□ -0.11
SMARCA4-206ENST00000538456 ZDHHC9Q9Y397 364 aa14.36□□□□□ -0.11
SMARCA4-206ENST00000538456 FARP1Q9Y4F1 1045 aaPredicted RBP14.36□□□□□ -0.11
SMARCA4-206ENST00000538456 OR51B4Q9Y5P0 310 aa14.36□□□□□ -0.11
SMARCA4-206ENST00000538456 RP1P56715 2156 aa14.36□□□□□ -0.11
SMARCA4-206ENST00000538456 NEMP2A6NFY4 417 aa14.35□□□□□ -0.11
SMARCA4-206ENST00000538456 B8ZZF3 427 aa14.35□□□□□ -0.11
SMARCA4-206ENST00000538456 K7ERQ8 282 aa14.35□□□□□ -0.11
SMARCA4-206ENST00000538456 RNF103O00237 685 aa14.35□□□□□ -0.11
SMARCA4-206ENST00000538456 SCAMP1O15126 338 aa14.35□□□□□ -0.11
SMARCA4-206ENST00000538456 THAP12O43422 761 aa14.35□□□□□ -0.11
SMARCA4-206ENST00000538456 SNAP91O60641 907 aa14.35□□□□□ -0.11
SMARCA4-206ENST00000538456 GRAP2O75791 330 aa14.35□□□□□ -0.11
SMARCA4-206ENST00000538456 MT-CO1P00395 513 aa14.35□□□□□ -0.11
SMARCA4-206ENST00000538456 SRCP12931 536 aa14.35□□□□□ -0.11
SMARCA4-206ENST00000538456 C6P13671 934 aa14.35□□□□□ -0.11
SMARCA4-206ENST00000538456 TGM2P21980 687 aa14.35□□□□□ -0.11
SMARCA4-206ENST00000538456 CHRNA3P32297 505 aa14.35□□□□□ -0.11
SMARCA4-206ENST00000538456 DUSP3P51452 185 aaPredicted RBP14.35□□□□□ -0.11
SMARCA4-206ENST00000538456 CDK17Q00537 523 aa14.35□□□□□ -0.11
SMARCA4-206ENST00000538456 GCNT1Q02742 428 aa14.35□□□□□ -0.11
SMARCA4-206ENST00000538456 CETN1Q12798 172 aa14.35□□□□□ -0.11
SMARCA4-206ENST00000538456 NME3Q13232 169 aa14.35□□□□□ -0.11
SMARCA4-206ENST00000538456 PDCLQ13371 301 aa14.35□□□□□ -0.11
SMARCA4-206ENST00000538456 EIF4EBP2Q13542 120 aaPredicted RBP14.35□□□□□ -0.11
SMARCA4-206ENST00000538456 ISXQ2M1V0 245 aa14.35□□□□□ -0.11
SMARCA4-206ENST00000538456 COBLL1Q53SF7 1204 aa14.35□□□□□ -0.11
SMARCA4-206ENST00000538456 KIAA1614Q5VZ46 1190 aa14.35□□□□□ -0.11
SMARCA4-206ENST00000538456 NEK5Q6P3R8 708 aa14.35□□□□□ -0.11
SMARCA4-206ENST00000538456 Q6ZSR6 202 aa14.35□□□□□ -0.11
SMARCA4-206ENST00000538456 DEFB106AQ8N104 65 aa14.35□□□□□ -0.11
SMARCA4-206ENST00000538456 CHST14Q8NCH0 376 aa14.35□□□□□ -0.11
SMARCA4-206ENST00000538456 OR2A12Q8NGT7 310 aa14.35□□□□□ -0.11
SMARCA4-206ENST00000538456 STK32AQ8WU08 396 aa14.35□□□□□ -0.11
SMARCA4-206ENST00000538456 TTC9Q92623 222 aa14.35□□□□□ -0.11
SMARCA4-206ENST00000538456 ATXN7L3BQ96GX2 97 aa14.35□□□□□ -0.11
SMARCA4-206ENST00000538456 DPH1Q9BZG8 443 aa14.35□□□□□ -0.11
SMARCA4-206ENST00000538456 CLMPQ9H6B4 373 aa14.35□□□□□ -0.11
SMARCA4-206ENST00000538456 ACP6Q9NPH0 428 aa14.35□□□□□ -0.11
SMARCA4-206ENST00000538456 EVA1BQ9NVM1 165 aa14.35□□□□□ -0.11
SMARCA4-206ENST00000538456 SPTA1P02549 2419 aa14.34□□□□□ -0.11
SMARCA4-206ENST00000538456 A0A1W2PNU3 283 aaPredicted RBP14.34□□□□□ -0.11
SMARCA4-206ENST00000538456 CPED1A4D0V7 1026 aa14.34□□□□□ -0.11
SMARCA4-206ENST00000538456 PMS2P1A4D2B8 440 aa14.34□□□□□ -0.11
SMARCA4-206ENST00000538456 A6NNZ2 444 aa14.34□□□□□ -0.11
SMARCA4-206ENST00000538456 PSMA7O14818 248 aa14.34□□□□□ -0.11
SMARCA4-206ENST00000538456 PMM2O15305 246 aa14.34□□□□□ -0.11
SMARCA4-206ENST00000538456 MED7O43513 233 aa14.34□□□□□ -0.11
SMARCA4-206ENST00000538456 RRM1P23921 792 aa14.34□□□□□ -0.11
SMARCA4-206ENST00000538456 RBMS1P29558 406 aaKnown RBP14.34□□□□□ -0.11
SMARCA4-206ENST00000538456 HNRNPKP61978 463 aaKnown RBP eCLIP14.34□□□□□ -0.11
SMARCA4-206ENST00000538456 CCDC15Q0P6D6 951 aa14.34□□□□□ -0.11
SMARCA4-206ENST00000538456 MAPK8IP2Q13387 824 aaPredicted RBP14.34□□□□□ -0.11
SMARCA4-206ENST00000538456 GUSBP11Q6P575 273 aa14.34□□□□□ -0.11
SMARCA4-206ENST00000538456 FOXR1Q6PIV2 292 aa14.34□□□□□ -0.11
SMARCA4-206ENST00000538456 CRTC1Q6UUV9 634 aa14.34□□□□□ -0.11
SMARCA4-206ENST00000538456 LINGO4Q6UY18 593 aa14.34□□□□□ -0.11
SMARCA4-206ENST00000538456 ABI3BPQ7Z7G0 1075 aa14.34□□□□□ -0.11
SMARCA4-206ENST00000538456 TMEM110Q86TL2 294 aa14.34□□□□□ -0.11
SMARCA4-206ENST00000538456 ZNF548Q8NEK5 533 aaPredicted RBP14.34□□□□□ -0.11
SMARCA4-206ENST00000538456 CCDC114Q96M63 670 aa14.34□□□□□ -0.11
SMARCA4-206ENST00000538456 GSDMAQ96QA5 445 aa14.34□□□□□ -0.11
SMARCA4-206ENST00000538456 DUSP23Q9BVJ7 150 aa14.34□□□□□ -0.11
SMARCA4-206ENST00000538456 GTPBP4Q9BZE4 634 aaKnown RBP14.34□□□□□ -0.11
SMARCA4-206ENST00000538456 SCAND2PQ9GZW5 306 aaPredicted RBP14.34□□□□□ -0.11
SMARCA4-206ENST00000538456 SIK2Q9H0K1 926 aa14.34□□□□□ -0.11
SMARCA4-206ENST00000538456 TNKS2Q9H2K2 1166 aa14.34□□□□□ -0.11
SMARCA4-206ENST00000538456 WDR70Q9NW82 654 aa14.34□□□□□ -0.11
SMARCA4-206ENST00000538456 VPS51Q9UID3 782 aa14.34□□□□□ -0.11
SMARCA4-206ENST00000538456 HS3ST2Q9Y278 367 aa14.34□□□□□ -0.11
SMARCA4-206ENST00000538456 HS3ST4Q9Y661 456 aa14.34□□□□□ -0.11
SMARCA4-206ENST00000538456 BOD1L1Q8NFC6 3051 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms