RNA–Protein interactions for RNA: ENST00000538367.5

TRA2A-211, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-211ENST00000538367 ZDHHC15Q96MV8 337 aa18.1■□□□□ 0.49
TRA2A-211ENST00000538367 ALPK1Q96QP1 1244 aa18.1■□□□□ 0.49
TRA2A-211ENST00000538367 C9orf16Q9BUW7 83 aa18.1■□□□□ 0.49
TRA2A-211ENST00000538367 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.1■□□□□ 0.49
TRA2A-211ENST00000538367 SMOXQ9NWM0 555 aa18.1■□□□□ 0.49
TRA2A-211ENST00000538367 TXNDC16Q9P2K2 825 aa18.1■□□□□ 0.49
TRA2A-211ENST00000538367 LTBP3Q9NS15 1303 aa18.1■□□□□ 0.49
TRA2A-211ENST00000538367 ENTPD3O75355 529 aa18.1■□□□□ 0.49
TRA2A-211ENST00000538367 RAD17O75943 681 aa18.1■□□□□ 0.49
TRA2A-211ENST00000538367 RSL1D1O76021 490 aaKnown RBP18.1■□□□□ 0.49
TRA2A-211ENST00000538367 HLCSP50747 726 aa18.1■□□□□ 0.49
TRA2A-211ENST00000538367 ZNF143P52747 638 aaPredicted RBP18.1■□□□□ 0.49
TRA2A-211ENST00000538367 WNT7BP56706 349 aa18.1■□□□□ 0.49
TRA2A-211ENST00000538367 FSTL1Q12841 308 aa18.1■□□□□ 0.49
TRA2A-211ENST00000538367 NFIAQ12857 509 aa18.1■□□□□ 0.49
TRA2A-211ENST00000538367 FRG1Q14331 258 aaKnown RBP18.1■□□□□ 0.49
TRA2A-211ENST00000538367 STILQ15468 1287 aa18.1■□□□□ 0.49
TRA2A-211ENST00000538367 SAMD4BQ5PRF9 694 aaKnown RBP18.1■□□□□ 0.49
TRA2A-211ENST00000538367 XYLT1Q86Y38 959 aa18.1■□□□□ 0.49
TRA2A-211ENST00000538367 MCRS1Q96EZ8 462 aa18.1■□□□□ 0.49
TRA2A-211ENST00000538367 NRBF2Q96F24 287 aa18.1■□□□□ 0.49
TRA2A-211ENST00000538367 SNX15Q9NRS6 342 aa18.1■□□□□ 0.49
TRA2A-211ENST00000538367 CISHQ9NSE2 258 aa18.1■□□□□ 0.49
TRA2A-211ENST00000538367 MTMR10Q9NXD2 777 aa18.1■□□□□ 0.49
TRA2A-211ENST00000538367 ADA2Q9NZK5 511 aa18.1■□□□□ 0.49
TRA2A-211ENST00000538367 NXF1Q9UBU9 619 aaKnown RBP18.1■□□□□ 0.49
TRA2A-211ENST00000538367 PCSK1NQ9UHG2 260 aa18.1■□□□□ 0.49
TRA2A-211ENST00000538367 TCEAL9Q9UHQ7 104 aa18.1■□□□□ 0.49
TRA2A-211ENST00000538367 DAPK2Q9UIK4 370 aa18.1■□□□□ 0.49
TRA2A-211ENST00000538367 SERPINA10Q9UK55 444 aa18.1■□□□□ 0.49
TRA2A-211ENST00000538367 COL2A1P02458 1487 aaPredicted RBP18.09■□□□□ 0.49
TRA2A-211ENST00000538367 DGAT1O75907 488 aa18.09■□□□□ 0.49
TRA2A-211ENST00000538367 CSPG5O95196 566 aa18.09■□□□□ 0.49
TRA2A-211ENST00000538367 MSX2P35548 267 aaPredicted RBP18.09■□□□□ 0.49
TRA2A-211ENST00000538367 BCAR1P56945 870 aa18.09■□□□□ 0.49
TRA2A-211ENST00000538367 ARPC4P59998 168 aa18.09■□□□□ 0.49
TRA2A-211ENST00000538367 NAPRTQ6XQN6 538 aa18.09■□□□□ 0.49
TRA2A-211ENST00000538367 RNF169Q8NCN4 708 aa18.09■□□□□ 0.49
TRA2A-211ENST00000538367 TMA16Q96EY4 203 aaKnown RBP18.09■□□□□ 0.49
TRA2A-211ENST00000538367 MAGED4Q96JG8 741 aa18.09■□□□□ 0.49
TRA2A-211ENST00000538367 FAM84AQ96KN4 292 aa18.09■□□□□ 0.49
TRA2A-211ENST00000538367 TRIM15Q9C019 465 aa18.09■□□□□ 0.49
TRA2A-211ENST00000538367 HMG20AQ9NP66 347 aa18.09■□□□□ 0.49
TRA2A-211ENST00000538367 VTA1Q9NP79 307 aa18.09■□□□□ 0.49
TRA2A-211ENST00000538367 SPAG4Q9NPE6 437 aa18.09■□□□□ 0.49
TRA2A-211ENST00000538367 OXSMQ9NWU1 459 aa18.09■□□□□ 0.49
TRA2A-211ENST00000538367 CD300AQ9UGN4 299 aa18.09■□□□□ 0.49
TRA2A-211ENST00000538367 PSME2Q9UL46 239 aa18.09■□□□□ 0.49
TRA2A-211ENST00000538367 TCAF1Q9Y4C2 921 aa18.09■□□□□ 0.49
TRA2A-211ENST00000538367 CORINQ9Y5Q5 1042 aa18.09■□□□□ 0.49
TRA2A-211ENST00000538367 CLDN25C9JDP6 229 aa18.08■□□□□ 0.49
TRA2A-211ENST00000538367 SOCS2O14508 198 aa18.08■□□□□ 0.49
TRA2A-211ENST00000538367 DNAJB1P25685 340 aa18.08■□□□□ 0.49
TRA2A-211ENST00000538367 ITGADQ13349 1161 aa18.08■□□□□ 0.49
TRA2A-211ENST00000538367 SHROOM1Q2M3G4 852 aaPredicted RBP18.08■□□□□ 0.49
TRA2A-211ENST00000538367 FAM160B2Q86V87 743 aa18.08■□□□□ 0.49
TRA2A-211ENST00000538367 HACE1Q8IYU2 909 aa18.08■□□□□ 0.49
TRA2A-211ENST00000538367 RNF148Q8N7C7 305 aa18.08■□□□□ 0.49
TRA2A-211ENST00000538367 SNX31Q8N9S9 440 aa18.08■□□□□ 0.49
TRA2A-211ENST00000538367 LPGAT1Q92604 370 aa18.08■□□□□ 0.49
TRA2A-211ENST00000538367 ZUFSPQ96AP4 578 aa18.08■□□□□ 0.49
TRA2A-211ENST00000538367 CNPY3Q9BT09 278 aa18.08■□□□□ 0.49
TRA2A-211ENST00000538367 GATA5Q9BWX5 397 aaPredicted RBP18.08■□□□□ 0.49
TRA2A-211ENST00000538367 DNAI2Q9GZS0 605 aa18.08■□□□□ 0.49
TRA2A-211ENST00000538367 NOL11Q9H8H0 719 aaKnown RBP18.08■□□□□ 0.49
TRA2A-211ENST00000538367 PDLIM7Q9NR12 457 aa18.08■□□□□ 0.49
TRA2A-211ENST00000538367 IFT52Q9Y366 437 aa18.08■□□□□ 0.49
TRA2A-211ENST00000538367 ZNF541Q9H0D2 1346 aa18.08■□□□□ 0.49
TRA2A-211ENST00000538367 TMEM150BA6NC51 233 aa18.08■□□□□ 0.48
TRA2A-211ENST00000538367 STX16-NPEPL1H3BU86 382 aa18.08■□□□□ 0.48
TRA2A-211ENST00000538367 J3QRK9 145 aa18.08■□□□□ 0.48
TRA2A-211ENST00000538367 DLGAP1O14490 977 aa18.08■□□□□ 0.48
TRA2A-211ENST00000538367 GRID2O43424 1007 aa18.08■□□□□ 0.48
TRA2A-211ENST00000538367 FOXD2O60548 495 aaPredicted RBP18.08■□□□□ 0.48
TRA2A-211ENST00000538367 SEC14L2O76054 403 aa18.08■□□□□ 0.48
TRA2A-211ENST00000538367 POLR2EP19388 210 aaKnown RBP18.08■□□□□ 0.48
TRA2A-211ENST00000538367 FGFR3P22607 806 aa18.08■□□□□ 0.48
TRA2A-211ENST00000538367 MYL6P60660 151 aa18.08■□□□□ 0.48
TRA2A-211ENST00000538367 PRAMEP78395 509 aa18.08■□□□□ 0.48
TRA2A-211ENST00000538367 TRAF2Q12933 501 aa18.08■□□□□ 0.48
TRA2A-211ENST00000538367 MMRN1Q13201 1228 aa18.08■□□□□ 0.48
TRA2A-211ENST00000538367 MTMR1Q13613 665 aa18.08■□□□□ 0.48
TRA2A-211ENST00000538367 PRKG1Q13976 671 aa18.08■□□□□ 0.48
TRA2A-211ENST00000538367 KCNJ8Q15842 424 aa18.08■□□□□ 0.48
TRA2A-211ENST00000538367 LIPMQ5VYY2 423 aa18.08■□□□□ 0.48
TRA2A-211ENST00000538367 FAM45BPQ6NSW5 357 aa18.08■□□□□ 0.48
TRA2A-211ENST00000538367 GALNT18Q6P9A2 607 aa18.08■□□□□ 0.48
TRA2A-211ENST00000538367 KCTD8Q6ZWB6 473 aa18.08■□□□□ 0.48
TRA2A-211ENST00000538367 CYP4V2Q6ZWL3 525 aaPredicted RBP18.08■□□□□ 0.48
TRA2A-211ENST00000538367 ZSCAN18Q8TBC5 510 aaPredicted RBP18.08■□□□□ 0.48
TRA2A-211ENST00000538367 FAM45AQ8TCE6 357 aa18.08■□□□□ 0.48
TRA2A-211ENST00000538367 S100ZQ8WXG8 99 aa18.08■□□□□ 0.48
TRA2A-211ENST00000538367 FBXL8Q96CD0 374 aa18.08■□□□□ 0.48
TRA2A-211ENST00000538367 SLC45A3Q96JT2 553 aa18.08■□□□□ 0.48
TRA2A-211ENST00000538367 MAELQ96JY0 434 aaKnown RBP18.08■□□□□ 0.48
TRA2A-211ENST00000538367 PEBP4Q96S96 227 aa18.08■□□□□ 0.48
TRA2A-211ENST00000538367 TBCBQ99426 244 aa18.08■□□□□ 0.48
TRA2A-211ENST00000538367 FTHL17Q9BXU8 183 aa18.08■□□□□ 0.48
TRA2A-211ENST00000538367 NACA2Q9H009 215 aa18.08■□□□□ 0.48
TRA2A-211ENST00000538367 WDR55Q9H6Y2 383 aaPredicted RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms