RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 EPN2O95208 641 aa17.05■□□□□ 0.32
SCARB1-205ENST00000538291 TCEA2Q15560 299 aa17.05■□□□□ 0.32
SCARB1-205ENST00000538291 BNIPLQ7Z465 357 aa17.05■□□□□ 0.32
SCARB1-205ENST00000538291 TTC7BQ86TV6 843 aa17.05■□□□□ 0.32
SCARB1-205ENST00000538291 FAM20CQ8IXL6 584 aa17.05■□□□□ 0.32
SCARB1-205ENST00000538291 HJURPQ8NCD3 748 aaPredicted RBP17.05■□□□□ 0.32
SCARB1-205ENST00000538291 RMND5BQ96G75 393 aaPredicted RBP17.05■□□□□ 0.32
SCARB1-205ENST00000538291 ZYG11BQ9C0D3 744 aa17.05■□□□□ 0.32
SCARB1-205ENST00000538291 SLITRK2Q9H156 845 aa17.05■□□□□ 0.32
SCARB1-205ENST00000538291 AASDHPPTQ9NRN7 309 aa17.05■□□□□ 0.32
SCARB1-205ENST00000538291 MAPRE3Q9UPY8 281 aa17.05■□□□□ 0.32
SCARB1-205ENST00000538291 SIK3Q9Y2K2 1263 aa17.05■□□□□ 0.32
SCARB1-205ENST00000538291 SIGLEC16A6NMB1 481 aa17.05■□□□□ 0.32
SCARB1-205ENST00000538291 F8VP50 259 aa17.05■□□□□ 0.32
SCARB1-205ENST00000538291 PSMB9P28065 219 aa17.05■□□□□ 0.32
SCARB1-205ENST00000538291 HTR1BP28222 390 aa17.05■□□□□ 0.32
SCARB1-205ENST00000538291 RPL9P32969 192 aaKnown RBP17.05■□□□□ 0.32
SCARB1-205ENST00000538291 PLK1P53350 603 aa17.05■□□□□ 0.32
SCARB1-205ENST00000538291 EARS2Q5JPH6 523 aaKnown RBP17.05■□□□□ 0.32
SCARB1-205ENST00000538291 DGKKQ5KSL6 1271 aa17.05■□□□□ 0.32
SCARB1-205ENST00000538291 TMPRSS6Q8IU80 811 aa17.05■□□□□ 0.32
SCARB1-205ENST00000538291 SLC25A23Q9BV35 468 aa17.05■□□□□ 0.32
SCARB1-205ENST00000538291 FUT8Q9BYC5 575 aa17.05■□□□□ 0.32
SCARB1-205ENST00000538291 QSOX1O00391 747 aa17.04■□□□□ 0.32
SCARB1-205ENST00000538291 TBL1XO60907 577 aa17.04■□□□□ 0.32
SCARB1-205ENST00000538291 CD86P42081 329 aa17.04■□□□□ 0.32
SCARB1-205ENST00000538291 SCTRP47872 440 aa17.04■□□□□ 0.32
SCARB1-205ENST00000538291 CDC73Q6P1J9 531 aa17.04■□□□□ 0.32
SCARB1-205ENST00000538291 RINLQ6ZS11 566 aa17.04■□□□□ 0.32
SCARB1-205ENST00000538291 CYP4X1Q8N118 509 aa17.04■□□□□ 0.32
SCARB1-205ENST00000538291 SVOPQ8N4V2 548 aa17.04■□□□□ 0.32
SCARB1-205ENST00000538291 SETD9Q8NE22 299 aa17.04■□□□□ 0.32
SCARB1-205ENST00000538291 SELENOMQ8WWX9 145 aa17.04■□□□□ 0.32
SCARB1-205ENST00000538291 RXFP1Q9HBX9 757 aa17.04■□□□□ 0.32
SCARB1-205ENST00000538291 A0A0A0MRY4 1105 aa17.04■□□□□ 0.32
SCARB1-205ENST00000538291 ENO4A6NNW6 628 aa17.04■□□□□ 0.32
SCARB1-205ENST00000538291 MAFO75444 373 aaPredicted RBP17.04■□□□□ 0.32
SCARB1-205ENST00000538291 FAM46CQ5VWP2 391 aa17.04■□□□□ 0.32
SCARB1-205ENST00000538291 C1orf186Q6ZWK4 172 aa17.04■□□□□ 0.32
SCARB1-205ENST00000538291 PLPPR4Q7Z2D5 763 aa17.04■□□□□ 0.32
SCARB1-205ENST00000538291 DENND1CQ8IV53 801 aa17.04■□□□□ 0.32
SCARB1-205ENST00000538291 SPATA13Q96N96 652 aa17.04■□□□□ 0.32
SCARB1-205ENST00000538291 MIR1-1HGQ9H1L0 117 aa17.04■□□□□ 0.32
SCARB1-205ENST00000538291 EPB41L4BQ9H329 900 aa17.04■□□□□ 0.32
SCARB1-205ENST00000538291 RNF19AQ9NV58 838 aa17.04■□□□□ 0.32
SCARB1-205ENST00000538291 ETNK2Q9NVF9 386 aa17.04■□□□□ 0.32
SCARB1-205ENST00000538291 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.04■□□□□ 0.324e-8■□□□□ 10.2
SCARB1-205ENST00000538291 FAM198AQ9UFP1 575 aa17.04■□□□□ 0.32
SCARB1-205ENST00000538291 TMCO1Q9UM00 188 aa17.04■□□□□ 0.32
SCARB1-205ENST00000538291 ASTN2O75129 1339 aaPredicted RBP17.04■□□□□ 0.32
SCARB1-205ENST00000538291 CHURC1-FNTBB4DL54 471 aa17.04■□□□□ 0.32
SCARB1-205ENST00000538291 ACSL4O60488 711 aa17.04■□□□□ 0.32
SCARB1-205ENST00000538291 GJB6O95452 261 aa17.04■□□□□ 0.32
SCARB1-205ENST00000538291 CDK16Q00536 496 aa17.04■□□□□ 0.32
SCARB1-205ENST00000538291 FAM187BQ17R55 369 aa17.04■□□□□ 0.32
SCARB1-205ENST00000538291 OTUD3Q5T2D3 398 aaPredicted RBP17.04■□□□□ 0.32
SCARB1-205ENST00000538291 STXBP5Q5T5C0 1151 aa17.04■□□□□ 0.32
SCARB1-205ENST00000538291 KYAT3Q6YP21 454 aaKnown RBP17.04■□□□□ 0.32
SCARB1-205ENST00000538291 AGMOQ6ZNB7 445 aa17.04■□□□□ 0.32
SCARB1-205ENST00000538291 ST13P5Q8NFI4 369 aaPredicted RBP17.04■□□□□ 0.32
SCARB1-205ENST00000538291 TMEM79Q9BSE2 394 aa17.04■□□□□ 0.32
SCARB1-205ENST00000538291 FAIM2Q9BWQ8 316 aa17.04■□□□□ 0.32
SCARB1-205ENST00000538291 MYL12AP19105 171 aa17.04■□□□□ 0.32
SCARB1-205ENST00000538291 NFKB1P19838 968 aa17.04■□□□□ 0.32
SCARB1-205ENST00000538291 TAF13Q15543 124 aa17.04■□□□□ 0.32
SCARB1-205ENST00000538291 LRRC49Q8IUZ0 686 aa17.04■□□□□ 0.32
SCARB1-205ENST00000538291 KLQ9UEF7 1012 aa17.04■□□□□ 0.32
SCARB1-205ENST00000538291 SNX6Q9UNH7 406 aa17.04■□□□□ 0.32
SCARB1-205ENST00000538291 GPSM3Q9Y4H4 160 aa17.04■□□□□ 0.32
SCARB1-205ENST00000538291 PLSCR1O15162 318 aa17.04■□□□□ 0.32
SCARB1-205ENST00000538291 ST13P50502 369 aaKnown RBP17.04■□□□□ 0.32
SCARB1-205ENST00000538291 NEK3P51956 506 aa17.04■□□□□ 0.32
SCARB1-205ENST00000538291 FAAP100Q0VG06 881 aa17.04■□□□□ 0.32
SCARB1-205ENST00000538291 CCDC92Q53HC0 331 aaPredicted RBP17.04■□□□□ 0.32
SCARB1-205ENST00000538291 ZFP28Q8NHY6 868 aa17.04■□□□□ 0.32
SCARB1-205ENST00000538291 ERN1O75460 977 aaKnown RBP17.03■□□□□ 0.32
SCARB1-205ENST00000538291 PRKAR2AP13861 404 aaKnown RBP17.03■□□□□ 0.32
SCARB1-205ENST00000538291 FRG1Q14331 258 aaKnown RBP17.03■□□□□ 0.32
SCARB1-205ENST00000538291 CHADLQ6NUI6 762 aa17.03■□□□□ 0.32
SCARB1-205ENST00000538291 RNF145Q96MT1 663 aa17.03■□□□□ 0.32
SCARB1-205ENST00000538291 S100A13Q99584 98 aa17.03■□□□□ 0.32
SCARB1-205ENST00000538291 DUSP9Q99956 384 aaKnown RBP17.03■□□□□ 0.32
SCARB1-205ENST00000538291 SH3GL2Q99962 352 aa17.03■□□□□ 0.32
SCARB1-205ENST00000538291 ZNF232Q9UNY5 417 aa17.03■□□□□ 0.32
SCARB1-205ENST00000538291 ARIH1Q9Y4X5 557 aaPredicted RBP17.03■□□□□ 0.32
SCARB1-205ENST00000538291 HES2Q9Y543 173 aa17.03■□□□□ 0.32
SCARB1-205ENST00000538291 KRT75O95678 551 aa17.03■□□□□ 0.32
SCARB1-205ENST00000538291 CRYBB1P53674 252 aaPredicted RBP17.03■□□□□ 0.32
SCARB1-205ENST00000538291 PSMD5Q16401 504 aa17.03■□□□□ 0.32
SCARB1-205ENST00000538291 HIC2Q96JB3 615 aa17.03■□□□□ 0.32
SCARB1-205ENST00000538291 OXCT2Q9BYC2 517 aaPredicted RBP17.03■□□□□ 0.32
SCARB1-205ENST00000538291 CEP44Q9C0F1 390 aa17.03■□□□□ 0.32
SCARB1-205ENST00000538291 SEMA4BQ9NPR2 832 aaPredicted RBP17.03■□□□□ 0.32
SCARB1-205ENST00000538291 PIPSLA2A3N6 862 aa17.03■□□□□ 0.32
SCARB1-205ENST00000538291 ZSCAN5CA6NGD5 496 aaPredicted RBP17.03■□□□□ 0.32
SCARB1-205ENST00000538291 FCHO1O14526 889 aa17.03■□□□□ 0.32
SCARB1-205ENST00000538291 KIF1CO43896 1103 aaKnown RBP17.03■□□□□ 0.32
SCARB1-205ENST00000538291 ZNF143P52747 638 aaPredicted RBP17.03■□□□□ 0.32
SCARB1-205ENST00000538291 CORO7P57737 925 aa17.03■□□□□ 0.32
SCARB1-205ENST00000538291 TSNQ15631 228 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms