RNA–Protein interactions for RNA: ENST00000538145.5

RHBDL3-204, Transcript of rhomboid like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RHBDL3, Length 1,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3-204ENST00000538145 SLC39A8Q9C0K1 460 aa22.42■■□□□ 1.18
RHBDL3-204ENST00000538145 MKRN2Q9H000 416 aaKnown RBP22.42■■□□□ 1.18
RHBDL3-204ENST00000538145 ETNK2Q9NVF9 386 aa22.42■■□□□ 1.18
RHBDL3-204ENST00000538145 KLHL11Q9NVR0 708 aa22.42■■□□□ 1.18
RHBDL3-204ENST00000538145 HPCAL4Q9UM19 191 aa22.42■■□□□ 1.18
RHBDL3-204ENST00000538145 PRR23AA6NEV1 266 aa22.41■■□□□ 1.18
RHBDL3-204ENST00000538145 GFRA3O60609 400 aa22.41■■□□□ 1.18
RHBDL3-204ENST00000538145 NDUFV2P19404 249 aa22.41■■□□□ 1.18
RHBDL3-204ENST00000538145 PXNP49023 591 aaPredicted RBP22.41■■□□□ 1.18
RHBDL3-204ENST00000538145 NAP1L1P55209 391 aaKnown RBP22.41■■□□□ 1.18
RHBDL3-204ENST00000538145 GEMIN4P57678 1058 aaKnown RBP22.41■■□□□ 1.18
RHBDL3-204ENST00000538145 DLG2Q15700 870 aa22.41■■□□□ 1.18
RHBDL3-204ENST00000538145 ANKRD20A8PQ5CZ79 823 aa22.41■■□□□ 1.18
RHBDL3-204ENST00000538145 ZC3H14Q6PJT7 736 aaKnown RBP22.41■■□□□ 1.18
RHBDL3-204ENST00000538145 KIAA1524Q8TCG1 905 aa22.41■■□□□ 1.18
RHBDL3-204ENST00000538145 CEP44Q9C0F1 390 aa22.41■■□□□ 1.18
RHBDL3-204ENST00000538145 SEMA4AQ9H3S1 761 aa22.41■■□□□ 1.18
RHBDL3-204ENST00000538145 CFAP54Q96N23 3096 aa22.4■■□□□ 1.18
RHBDL3-204ENST00000538145 ARHGAP42A6NI28 874 aa22.4■■□□□ 1.18
RHBDL3-204ENST00000538145 ZBTB24O43167 697 aaPredicted RBP22.4■■□□□ 1.18
RHBDL3-204ENST00000538145 KRT86O43790 486 aa22.4■■□□□ 1.18
RHBDL3-204ENST00000538145 SIN3BO75182 1162 aa22.4■■□□□ 1.18
RHBDL3-204ENST00000538145 SERPINB6P35237 376 aa22.4■■□□□ 1.18
RHBDL3-204ENST00000538145 PAFAH1B3Q15102 231 aaKnown RBP22.4■■□□□ 1.18
RHBDL3-204ENST00000538145 TAZQ16635 292 aa22.4■■□□□ 1.18
RHBDL3-204ENST00000538145 INO80DQ53TQ3 878 aaPredicted RBP22.4■■□□□ 1.18
RHBDL3-204ENST00000538145 HEATR6Q6AI08 1181 aaKnown RBP22.4■■□□□ 1.18
RHBDL3-204ENST00000538145 LINGO4Q6UY18 593 aa22.4■■□□□ 1.18
RHBDL3-204ENST00000538145 ASCL5Q7RTU5 278 aa22.4■■□□□ 1.18
RHBDL3-204ENST00000538145 KATNAL2Q8IYT4 538 aa22.4■■□□□ 1.18
RHBDL3-204ENST00000538145 ATP11CQ8NB49 1132 aa22.4■■□□□ 1.18
RHBDL3-204ENST00000538145 HMGB4Q8WW32 186 aa22.4■■□□□ 1.18
RHBDL3-204ENST00000538145 CASKIN2Q8WXE0 1202 aa22.4■■□□□ 1.18
RHBDL3-204ENST00000538145 CELF6Q96J87 481 aaKnown RBP22.4■■□□□ 1.18
RHBDL3-204ENST00000538145 RNF157Q96PX1 679 aa22.4■■□□□ 1.18
RHBDL3-204ENST00000538145 RSPH9Q9H1X1 276 aaPredicted RBP22.4■■□□□ 1.18
RHBDL3-204ENST00000538145 MTG2Q9H4K7 406 aa22.4■■□□□ 1.18
RHBDL3-204ENST00000538145 PRDM16Q9HAZ2 1276 aa22.4■■□□□ 1.18
RHBDL3-204ENST00000538145 PDFQ9HBH1 243 aa22.4■■□□□ 1.18
RHBDL3-204ENST00000538145 MFHAS1Q9Y4C4 1052 aa22.4■■□□□ 1.18
RHBDL3-204ENST00000538145 FRYLO94915 3013 aa22.4■■□□□ 1.18
RHBDL3-204ENST00000538145 SPAG17Q6Q759 2223 aa22.4■■□□□ 1.18
RHBDL3-204ENST00000538145 MACROD2A1Z1Q3 448 aa22.39■■□□□ 1.18
RHBDL3-204ENST00000538145 LRRD1A4D1F6 860 aa22.39■■□□□ 1.18
RHBDL3-204ENST00000538145 K7ERQ8 282 aa22.39■■□□□ 1.18
RHBDL3-204ENST00000538145 SMAD6O43541 496 aaKnown RBP22.39■■□□□ 1.18
RHBDL3-204ENST00000538145 ZNF821O75541 412 aaPredicted RBP22.39■■□□□ 1.18
RHBDL3-204ENST00000538145 CTNNA1P35221 906 aaKnown RBP22.39■■□□□ 1.18
RHBDL3-204ENST00000538145 PAPOLAP51003 745 aaKnown RBP22.39■■□□□ 1.18
RHBDL3-204ENST00000538145 NCBP2-AS2Q69YL0 99 aa22.39■■□□□ 1.18
RHBDL3-204ENST00000538145 TMPRSS6Q8IU80 811 aa22.39■■□□□ 1.18
RHBDL3-204ENST00000538145 SYCE1Q8N0S2 351 aa22.39■■□□□ 1.18
RHBDL3-204ENST00000538145 PQLC3Q8N755 202 aa22.39■■□□□ 1.18
RHBDL3-204ENST00000538145 UBE2Q2Q8WVN8 375 aa22.39■■□□□ 1.18
RHBDL3-204ENST00000538145 NKD2Q969F2 451 aaPredicted RBP22.39■■□□□ 1.18
RHBDL3-204ENST00000538145 ISG20Q96AZ6 181 aaKnown RBP22.39■■□□□ 1.18
RHBDL3-204ENST00000538145 BCCIPQ9P287 314 aaKnown RBP eCLIP22.39■■□□□ 1.18
RHBDL3-204ENST00000538145 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.39■■□□□ 1.18
RHBDL3-204ENST00000538145 PCDHA3Q9Y5H8 950 aa22.39■■□□□ 1.18
RHBDL3-204ENST00000538145 WDR87Q6ZQQ6 2873 aa22.39■■□□□ 1.18
RHBDL3-204ENST00000538145 PRAMEF11O60813 436 aa22.38■■□□□ 1.17
RHBDL3-204ENST00000538145 KRT1P04264 644 aa22.38■■□□□ 1.17
RHBDL3-204ENST00000538145 CTNNA2P26232 953 aa22.38■■□□□ 1.17
RHBDL3-204ENST00000538145 ZBTB16Q05516 673 aa22.38■■□□□ 1.17
RHBDL3-204ENST00000538145 ELAVL3Q14576 367 aaKnown RBP22.38■■□□□ 1.17
RHBDL3-204ENST00000538145 ZFYVE27Q5T4F4 411 aa22.38■■□□□ 1.17
RHBDL3-204ENST00000538145 C22orf39Q6P5X5 142 aa22.38■■□□□ 1.17
RHBDL3-204ENST00000538145 NT5DC3Q86UY8 548 aa22.38■■□□□ 1.17
RHBDL3-204ENST00000538145 PLPP6Q8IY26 295 aa22.38■■□□□ 1.17
RHBDL3-204ENST00000538145 KCNF1Q9H3M0 494 aa22.38■■□□□ 1.17
RHBDL3-204ENST00000538145 CAPN6Q9Y6Q1 641 aa22.38■■□□□ 1.17
RHBDL3-204ENST00000538145 ALOX15BO15296 676 aa22.37■■□□□ 1.17
RHBDL3-204ENST00000538145 HRO43593 1189 aa22.37■■□□□ 1.17
RHBDL3-204ENST00000538145 ZNF217O75362 1048 aa22.37■■□□□ 1.17
RHBDL3-204ENST00000538145 PALMO75781 387 aa22.37■■□□□ 1.17
RHBDL3-204ENST00000538145 VAV1P15498 845 aa22.37■■□□□ 1.17
RHBDL3-204ENST00000538145 ACCSLQ4AC99 568 aa22.37■■□□□ 1.17
RHBDL3-204ENST00000538145 SLC9A4Q6AI14 798 aa22.37■■□□□ 1.17
RHBDL3-204ENST00000538145 Q6ZVU0 165 aa22.37■■□□□ 1.17
RHBDL3-204ENST00000538145 PCDH20Q8N6Y1 951 aaKnown RBP22.37■■□□□ 1.17
RHBDL3-204ENST00000538145 EXD1Q8NHP7 514 aa22.37■■□□□ 1.17
RHBDL3-204ENST00000538145 GAB3Q8WWW8 586 aa22.37■■□□□ 1.17
RHBDL3-204ENST00000538145 PRCCQ92733 491 aaPredicted RBP22.37■■□□□ 1.17
RHBDL3-204ENST00000538145 KRT35Q92764 455 aa22.37■■□□□ 1.17
RHBDL3-204ENST00000538145 FAM129BQ96TA1 746 aa22.37■■□□□ 1.17
RHBDL3-204ENST00000538145 TPSD1Q9BZJ3 242 aa22.37■■□□□ 1.17
RHBDL3-204ENST00000538145 SLC6A17Q9H1V8 727 aa22.37■■□□□ 1.17
RHBDL3-204ENST00000538145 USP36Q9P275 1121 aaKnown RBP22.37■■□□□ 1.17
RHBDL3-204ENST00000538145 R4GN57 208 aa22.37■■□□□ 1.17
RHBDL3-204ENST00000538145 CCDC66A2RUB6 948 aa22.36■■□□□ 1.17
RHBDL3-204ENST00000538145 MCF2LO15068 1137 aa22.36■■□□□ 1.17
RHBDL3-204ENST00000538145 IGLV3-19P01714 112 aa22.36■■□□□ 1.17
RHBDL3-204ENST00000538145 P2RY2P41231 377 aa22.36■■□□□ 1.17
RHBDL3-204ENST00000538145 CDKN2BP42772 138 aa22.36■■□□□ 1.17
RHBDL3-204ENST00000538145 MARCKSL1P49006 195 aa22.36■■□□□ 1.17
RHBDL3-204ENST00000538145 RPS14P62263 151 aaKnown RBP22.36■■□□□ 1.17
RHBDL3-204ENST00000538145 IL10RBQ08334 325 aa22.36■■□□□ 1.17
RHBDL3-204ENST00000538145 MAP7D1Q3KQU3 841 aa22.36■■□□□ 1.17
RHBDL3-204ENST00000538145 USP39Q53GS9 565 aaKnown RBP22.36■■□□□ 1.17
RHBDL3-204ENST00000538145 ZNF776Q68DI1 518 aaPredicted RBP22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms