RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 NEBLO76041 1014 aa17.78■□□□□ 0.44
SNX17-210ENST00000537606 CXCL10P02778 98 aa17.78■□□□□ 0.44
SNX17-210ENST00000537606 ITGA2BP08514 1039 aa17.78■□□□□ 0.44
SNX17-210ENST00000537606 KCNQ1P51787 676 aa17.78■□□□□ 0.44
SNX17-210ENST00000537606 MAXP61244 160 aa17.78■□□□□ 0.44
SNX17-210ENST00000537606 PDE1BQ01064 536 aa17.78■□□□□ 0.44
SNX17-210ENST00000537606 POU6F1Q14863 301 aa17.78■□□□□ 0.44
SNX17-210ENST00000537606 PPM1JQ5JR12 505 aa17.78■□□□□ 0.44
SNX17-210ENST00000537606 FYB2Q5VWT5 728 aa17.78■□□□□ 0.44
SNX17-210ENST00000537606 ZNF449Q6P9G9 518 aa17.78■□□□□ 0.44
SNX17-210ENST00000537606 MTDHQ86UE4 582 aaKnown RBP17.78■□□□□ 0.44
SNX17-210ENST00000537606 SEZ6LQ9BYH1 1024 aa17.78■□□□□ 0.44
SNX17-210ENST00000537606 ZYG11BQ9C0D3 744 aa17.78■□□□□ 0.44
SNX17-210ENST00000537606 TXNDC16Q9P2K2 825 aa17.78■□□□□ 0.44
SNX17-210ENST00000537606 HAO1Q9UJM8 370 aa17.78■□□□□ 0.44
SNX17-210ENST00000537606 PLXNA3P51805 1871 aa17.78■□□□□ 0.44
SNX17-210ENST00000537606 ZNF189O75820 626 aaPredicted RBP17.77■□□□□ 0.44
SNX17-210ENST00000537606 UNC5CO95185 931 aa17.77■□□□□ 0.44
SNX17-210ENST00000537606 CBX6O95503 412 aa17.77■□□□□ 0.44
SNX17-210ENST00000537606 HTR7P34969 479 aa17.77■□□□□ 0.44
SNX17-210ENST00000537606 CCNFP41002 786 aa17.77■□□□□ 0.44
SNX17-210ENST00000537606 MNX1P50219 401 aaPredicted RBP17.77■□□□□ 0.44
SNX17-210ENST00000537606 CCDC15Q0P6D6 951 aa17.77■□□□□ 0.44
SNX17-210ENST00000537606 CDH17Q12864 832 aa17.77■□□□□ 0.44
SNX17-210ENST00000537606 TRIP4Q15650 581 aaPredicted RBP17.77■□□□□ 0.44
SNX17-210ENST00000537606 SPOUT1Q5T280 376 aaKnown RBP17.77■□□□□ 0.44
SNX17-210ENST00000537606 AFMIDQ63HM1 303 aa17.77■□□□□ 0.44
SNX17-210ENST00000537606 NAPEPLDQ6IQ20 393 aa17.77■□□□□ 0.44
SNX17-210ENST00000537606 ASRGL1Q7L266 308 aa17.77■□□□□ 0.44
SNX17-210ENST00000537606 CHSY1Q86X52 802 aa17.77■□□□□ 0.44
SNX17-210ENST00000537606 ATP6V0D2Q8N8Y2 350 aa17.77■□□□□ 0.44
SNX17-210ENST00000537606 ZNF784Q8NCA9 323 aaPredicted RBP17.77■□□□□ 0.44
SNX17-210ENST00000537606 PABPC5Q96DU9 382 aaKnown RBP17.77■□□□□ 0.44
SNX17-210ENST00000537606 BTN2A3PQ96KV6 586 aa17.77■□□□□ 0.44
SNX17-210ENST00000537606 FICDQ9BVA6 458 aa17.77■□□□□ 0.44
SNX17-210ENST00000537606 PRDM5Q9NQX1 630 aaPredicted RBP17.77■□□□□ 0.44
SNX17-210ENST00000537606 BAIAP2L1Q9UHR4 511 aa17.77■□□□□ 0.44
SNX17-210ENST00000537606 ATP11BQ9Y2G3 1177 aa17.77■□□□□ 0.44
SNX17-210ENST00000537606 CFAP73A6NFT4 308 aa17.77■□□□□ 0.43
SNX17-210ENST00000537606 CACNG3O60359 315 aa17.77■□□□□ 0.43
SNX17-210ENST00000537606 ZNF33AQ06730 810 aa17.77■□□□□ 0.43
SNX17-210ENST00000537606 PCSK7Q16549 785 aa17.77■□□□□ 0.43
SNX17-210ENST00000537606 TAF1BQ53T94 588 aaPredicted RBP17.77■□□□□ 0.43
SNX17-210ENST00000537606 KIAA1841Q6NSI8 718 aa17.77■□□□□ 0.43
SNX17-210ENST00000537606 ANKRD33Q7Z3H0 272 aa17.77■□□□□ 0.43
SNX17-210ENST00000537606 SPATA17Q96L03 361 aa17.77■□□□□ 0.43
SNX17-210ENST00000537606 RPRD1AQ96P16 312 aaPredicted RBP17.77■□□□□ 0.43
SNX17-210ENST00000537606 FCRL5Q96RD9 977 aa17.77■□□□□ 0.43
SNX17-210ENST00000537606 C20orf96Q9NUD7 363 aaPredicted RBP17.77■□□□□ 0.43
SNX17-210ENST00000537606 SAGE1Q9NXZ1 904 aa17.77■□□□□ 0.43
SNX17-210ENST00000537606 AAR2Q9Y312 384 aaKnown RBP17.77■□□□□ 0.43
SNX17-210ENST00000537606 USP1O94782 785 aa17.76■□□□□ 0.43
SNX17-210ENST00000537606 TROVE2P10155 538 aaKnown RBP eCLIP17.76■□□□□ 0.43
SNX17-210ENST00000537606 ALDH3A1P30838 453 aa17.76■□□□□ 0.43
SNX17-210ENST00000537606 CHRNA4P43681 627 aa17.76■□□□□ 0.43
SNX17-210ENST00000537606 NPY2RP49146 381 aa17.76■□□□□ 0.43
SNX17-210ENST00000537606 NRG1Q02297 640 aaPredicted RBP17.76■□□□□ 0.43
SNX17-210ENST00000537606 ITKQ08881 620 aa17.76■□□□□ 0.43
SNX17-210ENST00000537606 PDE1CQ14123 709 aaPredicted RBP17.76■□□□□ 0.43
SNX17-210ENST00000537606 SNCBQ16143 134 aa17.76■□□□□ 0.43
SNX17-210ENST00000537606 STRA8Q7Z7C7 330 aa17.76■□□□□ 0.43
SNX17-210ENST00000537606 CMC1Q7Z7K0 106 aa17.76■□□□□ 0.43
SNX17-210ENST00000537606 CFAP52Q8N1V2 620 aa17.76■□□□□ 0.43
SNX17-210ENST00000537606 ATP2A3Q93084 1043 aa17.76■□□□□ 0.43
SNX17-210ENST00000537606 PRR11Q96HE9 360 aaPredicted RBP17.76■□□□□ 0.43
SNX17-210ENST00000537606 TBL1YQ9BQ87 522 aa17.76■□□□□ 0.43
SNX17-210ENST00000537606 IL22Q9GZX6 179 aa17.76■□□□□ 0.43
SNX17-210ENST00000537606 CWH43Q9H720 699 aa17.76■□□□□ 0.43
SNX17-210ENST00000537606 T-ENOLP0DO92 83 aa17.76■□□□□ 0.43
SNX17-210ENST00000537606 SLC10A7Q0GE19 358 aa17.76■□□□□ 0.43
SNX17-210ENST00000537606 USP41Q3LFD5 358 aa17.76■□□□□ 0.43
SNX17-210ENST00000537606 TEDDM1Q5T9Z0 273 aa17.76■□□□□ 0.43
SNX17-210ENST00000537606 SUGP1Q8IWZ8 645 aaKnown RBP17.76■□□□□ 0.43
SNX17-210ENST00000537606 PSMG2Q969U7 264 aa17.76■□□□□ 0.43
SNX17-210ENST00000537606 VWCEQ96DN2 955 aa17.76■□□□□ 0.43
SNX17-210ENST00000537606 KCNK13Q9HB14 408 aa17.76■□□□□ 0.43
SNX17-210ENST00000537606 NT5MQ9NPB1 228 aa17.76■□□□□ 0.43
SNX17-210ENST00000537606 ARHGEF3Q9NR81 526 aa17.76■□□□□ 0.43
SNX17-210ENST00000537606 IARS2Q9NSE4 1012 aaKnown RBP17.76■□□□□ 0.43
SNX17-210ENST00000537606 FAM237BA0A1B0GVD1 139 aa17.75■□□□□ 0.43
SNX17-210ENST00000537606 DCTN3O75935 186 aa17.75■□□□□ 0.43
SNX17-210ENST00000537606 SEC24AO95486 1093 aa17.75■□□□□ 0.43
SNX17-210ENST00000537606 ATP6V1G2O95670 118 aa17.75■□□□□ 0.43
SNX17-210ENST00000537606 RHOQP17081 205 aa17.75■□□□□ 0.43
SNX17-210ENST00000537606 CRHR1P34998 444 aa17.75■□□□□ 0.43
SNX17-210ENST00000537606 GP5P40197 560 aa17.75■□□□□ 0.43
SNX17-210ENST00000537606 PSEN1P49768 467 aa17.75■□□□□ 0.43
SNX17-210ENST00000537606 RPL10AP62906 217 aaKnown RBP17.75■□□□□ 0.43
SNX17-210ENST00000537606 NADSYN1Q6IA69 706 aa17.75■□□□□ 0.43
SNX17-210ENST00000537606 TIGD7Q6NT04 549 aaPredicted RBP17.75■□□□□ 0.43
SNX17-210ENST00000537606 RFWD3Q6PCD5 774 aa17.75■□□□□ 0.43
SNX17-210ENST00000537606 TIFABQ6ZNK6 161 aa17.75■□□□□ 0.43
SNX17-210ENST00000537606 ZCCHC23Q6ZST2 131 aa17.75■□□□□ 0.43
SNX17-210ENST00000537606 KCNMB4Q86W47 210 aa17.75■□□□□ 0.43
SNX17-210ENST00000537606 ZNF512Q96ME7 567 aaPredicted RBP17.75■□□□□ 0.43
SNX17-210ENST00000537606 TRIM55Q9BYV6 548 aa17.75■□□□□ 0.43
SNX17-210ENST00000537606 OLA1Q9NTK5 396 aaKnown RBP17.75■□□□□ 0.43
SNX17-210ENST00000537606 GREB1Q4ZG55 1949 aa17.75■□□□□ 0.43
SNX17-210ENST00000537606 WASH4PA8MWX3 477 aa17.74■□□□□ 0.43
SNX17-210ENST00000537606 GJB5O95377 273 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms