RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 PDK2Q15119 407 aa8.39□□□□□ -1.07
ABCA4-207ENST00000536513 SNX30Q5VWJ9 437 aa8.39□□□□□ -1.07
ABCA4-207ENST00000536513 CDKL3Q8IVW4 592 aaPredicted RBP8.39□□□□□ -1.07
ABCA4-207ENST00000536513 MPP5Q8N3R9 675 aa8.39□□□□□ -1.07
ABCA4-207ENST00000536513 OR7D4Q8NG98 312 aa8.39□□□□□ -1.07
ABCA4-207ENST00000536513 MAGEC3Q8TD91 643 aa8.39□□□□□ -1.07
ABCA4-207ENST00000536513 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.39□□□□□ -1.07
ABCA4-207ENST00000536513 CCDC124Q96CT7 223 aaKnown RBP8.39□□□□□ -1.07
ABCA4-207ENST00000536513 DTNBP1Q96EV8 351 aa8.39□□□□□ -1.07
ABCA4-207ENST00000536513 SHCBP1LQ9BZQ2 653 aa8.39□□□□□ -1.07
ABCA4-207ENST00000536513 VPS11Q9H270 941 aa8.39□□□□□ -1.07
ABCA4-207ENST00000536513 PCYOX1Q9UHG3 505 aa8.39□□□□□ -1.07
ABCA4-207ENST00000536513 ANGPTL2Q9UKU9 493 aa8.39□□□□□ -1.07
ABCA4-207ENST00000536513 PCDHB8Q9UN66 801 aa8.39□□□□□ -1.07
ABCA4-207ENST00000536513 DNALI1O14645 258 aaPredicted RBP8.38□□□□□ -1.07
ABCA4-207ENST00000536513 GABRDO14764 452 aa8.38□□□□□ -1.07
ABCA4-207ENST00000536513 ZBTB24O43167 697 aaPredicted RBP8.38□□□□□ -1.07
ABCA4-207ENST00000536513 SUPT3HO75486 399 aa8.38□□□□□ -1.07
ABCA4-207ENST00000536513 SMNDC1O75940 238 aaKnown RBP eCLIP8.38□□□□□ -1.07
ABCA4-207ENST00000536513 FGF18O76093 207 aa8.38□□□□□ -1.07
ABCA4-207ENST00000536513 FBXO21O94952 628 aa8.38□□□□□ -1.07
ABCA4-207ENST00000536513 FYNP06241 537 aa8.38□□□□□ -1.07
ABCA4-207ENST00000536513 GSTT1P30711 240 aa8.38□□□□□ -1.07
ABCA4-207ENST00000536513 CSE1LP55060 971 aaKnown RBP8.38□□□□□ -1.07
ABCA4-207ENST00000536513 SH3BGRP55822 239 aaPredicted RBP8.38□□□□□ -1.07
ABCA4-207ENST00000536513 ZNF235Q14590 738 aa8.38□□□□□ -1.07
ABCA4-207ENST00000536513 ALFQ53S48 1182 aa8.38□□□□□ -1.07
ABCA4-207ENST00000536513 C1orf146Q5VVC0 180 aa8.38□□□□□ -1.07
ABCA4-207ENST00000536513 PCGF5Q86SE9 256 aa8.38□□□□□ -1.07
ABCA4-207ENST00000536513 RASSF3Q86WH2 238 aa8.38□□□□□ -1.07
ABCA4-207ENST00000536513 PPIL6Q8IXY8 311 aa8.38□□□□□ -1.07
ABCA4-207ENST00000536513 SPATA6LQ8N4H0 392 aa8.38□□□□□ -1.07
ABCA4-207ENST00000536513 CPT1BQ92523 772 aa8.38□□□□□ -1.07
ABCA4-207ENST00000536513 SGF29Q96ES7 293 aa8.38□□□□□ -1.07
ABCA4-207ENST00000536513 IGSF21Q96ID5 467 aa8.38□□□□□ -1.07
ABCA4-207ENST00000536513 C17orf80Q9BSJ5 609 aa8.38□□□□□ -1.07
ABCA4-207ENST00000536513 SARS2Q9NP81 518 aaKnown RBP8.38□□□□□ -1.07
ABCA4-207ENST00000536513 PRR23AA6NEV1 266 aa8.38□□□□□ -1.07
ABCA4-207ENST00000536513 TEX28O15482 410 aa8.38□□□□□ -1.07
ABCA4-207ENST00000536513 UGT1A9O60656 530 aa8.38□□□□□ -1.07
ABCA4-207ENST00000536513 GJB3O75712 270 aa8.38□□□□□ -1.07
ABCA4-207ENST00000536513 RTN3O95197 1032 aaPredicted RBP8.38□□□□□ -1.07
ABCA4-207ENST00000536513 ERVK-10P10266 1014 aa8.38□□□□□ -1.07
ABCA4-207ENST00000536513 IGFBP4P22692 258 aa8.38□□□□□ -1.07
ABCA4-207ENST00000536513 ATP5C1P36542 298 aaKnown RBP8.38□□□□□ -1.07
ABCA4-207ENST00000536513 GPNMBQ14956 572 aa8.38□□□□□ -1.07
ABCA4-207ENST00000536513 PDK1Q15118 436 aa8.38□□□□□ -1.07
ABCA4-207ENST00000536513 MRPL10Q7Z7H8 261 aaKnown RBP8.38□□□□□ -1.07
ABCA4-207ENST00000536513 LDB1Q86U70 411 aaPredicted RBP8.38□□□□□ -1.07
ABCA4-207ENST00000536513 NPWQ8N729 165 aa8.38□□□□□ -1.07
ABCA4-207ENST00000536513 ATXN2Q99700 1313 aaKnown RBP8.38□□□□□ -1.07
ABCA4-207ENST00000536513 MCOLN1Q9GZU1 580 aa8.38□□□□□ -1.07
ABCA4-207ENST00000536513 RNPEPL1Q9HAU8 725 aa8.38□□□□□ -1.07
ABCA4-207ENST00000536513 UGT1A7Q9HAW7 530 aa8.38□□□□□ -1.07
ABCA4-207ENST00000536513 UGT1A10Q9HAW8 530 aa8.38□□□□□ -1.07
ABCA4-207ENST00000536513 UGT1A8Q9HAW9 530 aa8.38□□□□□ -1.07
ABCA4-207ENST00000536513 PAK6Q9NQU5 681 aaPredicted RBP8.38□□□□□ -1.07
ABCA4-207ENST00000536513 PPARGC1AQ9UBK2 798 aaKnown RBP8.38□□□□□ -1.07
ABCA4-207ENST00000536513 MARCOQ9UEW3 520 aaPredicted RBP8.38□□□□□ -1.07
ABCA4-207ENST00000536513 SEC24AO95486 1093 aa8.38□□□□□ -1.07
ABCA4-207ENST00000536513 CDH5P33151 784 aaPredicted RBP8.38□□□□□ -1.07
ABCA4-207ENST00000536513 PTDSS1P48651 473 aaKnown RBP8.38□□□□□ -1.07
ABCA4-207ENST00000536513 RPL10AP62906 217 aaKnown RBP8.38□□□□□ -1.07
ABCA4-207ENST00000536513 OVGP1Q12889 678 aa8.38□□□□□ -1.07
ABCA4-207ENST00000536513 CDH18Q13634 790 aa8.38□□□□□ -1.07
ABCA4-207ENST00000536513 THOC5Q13769 683 aaKnown RBP8.38□□□□□ -1.07
ABCA4-207ENST00000536513 PKN2Q16513 984 aaKnown RBP8.38□□□□□ -1.07
ABCA4-207ENST00000536513 KBTBD12Q3ZCT8 623 aa8.38□□□□□ -1.07
ABCA4-207ENST00000536513 CERCAMQ5T4B2 595 aa8.38□□□□□ -1.07
ABCA4-207ENST00000536513 ARHGAP18Q8N392 663 aa8.38□□□□□ -1.07
ABCA4-207ENST00000536513 MCUQ8NE86 351 aa8.38□□□□□ -1.07
ABCA4-207ENST00000536513 CMASQ8NFW8 434 aaPredicted RBP8.38□□□□□ -1.07
ABCA4-207ENST00000536513 STK32AQ8WU08 396 aa8.38□□□□□ -1.07
ABCA4-207ENST00000536513 AZIN2Q96A70 460 aa8.38□□□□□ -1.07
ABCA4-207ENST00000536513 SLC22A12Q96S37 553 aa8.38□□□□□ -1.07
ABCA4-207ENST00000536513 FICDQ9BVA6 458 aa8.38□□□□□ -1.07
ABCA4-207ENST00000536513 FBXO44Q9H4M3 255 aa8.38□□□□□ -1.07
ABCA4-207ENST00000536513 MARCH5Q9NX47 278 aa8.38□□□□□ -1.07
ABCA4-207ENST00000536513 NDE1Q9NXR1 346 aa8.38□□□□□ -1.07
ABCA4-207ENST00000536513 GALNT8Q9NY28 637 aa8.38□□□□□ -1.07
ABCA4-207ENST00000536513 VPS28Q9UK41 221 aa8.38□□□□□ -1.07
ABCA4-207ENST00000536513 ZDBF2Q9HCK1 2354 aa8.38□□□□□ -1.07
ABCA4-207ENST00000536513 ANKRD12Q6UB98 2062 aa8.37□□□□□ -1.07
ABCA4-207ENST00000536513 HIDE1A8MVS5 230 aa8.37□□□□□ -1.07
ABCA4-207ENST00000536513 F5H5T6 163 aa8.37□□□□□ -1.07
ABCA4-207ENST00000536513 H7C4K7 107 aa8.37□□□□□ -1.07
ABCA4-207ENST00000536513 I6L893 689 aaPredicted RBP8.37□□□□□ -1.07
ABCA4-207ENST00000536513 J3KR12 359 aa8.37□□□□□ -1.07
ABCA4-207ENST00000536513 DAB1O75553 588 aa8.37□□□□□ -1.07
ABCA4-207ENST00000536513 MT-ND3P03897 115 aa8.37□□□□□ -1.07
ABCA4-207ENST00000536513 ATP6V1B1P15313 513 aa8.37□□□□□ -1.07
ABCA4-207ENST00000536513 PGM1P36871 562 aa8.37□□□□□ -1.07
ABCA4-207ENST00000536513 EPHB3P54753 998 aa8.37□□□□□ -1.07
ABCA4-207ENST00000536513 WDR5P61964 334 aaKnown RBP8.37□□□□□ -1.07
ABCA4-207ENST00000536513 HSP90AA5PQ58FG0 334 aa8.37□□□□□ -1.07
ABCA4-207ENST00000536513 DNAJB7Q7Z6W7 309 aaPredicted RBP8.37□□□□□ -1.07
ABCA4-207ENST00000536513 SCD5Q86SK9 330 aa8.37□□□□□ -1.07
ABCA4-207ENST00000536513 LCA5Q86VQ0 697 aa8.37□□□□□ -1.07
ABCA4-207ENST00000536513 MON1AQ86VX9 555 aa8.37□□□□□ -1.07
ABCA4-207ENST00000536513 PSMG2Q969U7 264 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms