RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 FBXL22Q6P050 247 aa8.16□□□□□ -1.1
COL21A1-212ENST00000535941 ZNF783Q6ZMS7 281 aa8.16□□□□□ -1.1
COL21A1-212ENST00000535941 PIGWQ7Z7B1 504 aa8.16□□□□□ -1.1
COL21A1-212ENST00000535941 DRAXINQ8NBI3 349 aaPredicted RBP8.16□□□□□ -1.1
COL21A1-212ENST00000535941 IMP4Q96G21 291 aaKnown RBP8.16□□□□□ -1.1
COL21A1-212ENST00000535941 ZNF599Q96NL3 588 aa8.16□□□□□ -1.1
COL21A1-212ENST00000535941 PGLYRP2Q96PD5 576 aa8.16□□□□□ -1.1
COL21A1-212ENST00000535941 TSC22D3Q99576 134 aa8.16□□□□□ -1.1
COL21A1-212ENST00000535941 OR51B4Q9Y5P0 310 aa8.16□□□□□ -1.1
COL21A1-212ENST00000535941 CXorf49A8MYA2 514 aaPredicted RBP8.15□□□□□ -1.1
COL21A1-212ENST00000535941 SMIM24O75264 130 aa8.15□□□□□ -1.1
COL21A1-212ENST00000535941 WISP3O95389 354 aaPredicted RBP8.15□□□□□ -1.1
COL21A1-212ENST00000535941 GSRP00390 522 aa8.15□□□□□ -1.1
COL21A1-212ENST00000535941 KLKB1P03952 638 aa8.15□□□□□ -1.1
COL21A1-212ENST00000535941 PRKCGP05129 697 aa8.15□□□□□ -1.1
COL21A1-212ENST00000535941 CSH1P0DML2 217 aa8.15□□□□□ -1.1
COL21A1-212ENST00000535941 CSH2P0DML3 217 aa8.15□□□□□ -1.1
COL21A1-212ENST00000535941 CHN1P15882 459 aa8.15□□□□□ -1.1
COL21A1-212ENST00000535941 PGAM1P18669 254 aa8.15□□□□□ -1.1
COL21A1-212ENST00000535941 HOXD9P28356 352 aaPredicted RBP8.15□□□□□ -1.1
COL21A1-212ENST00000535941 PHBP35232 272 aa8.15□□□□□ -1.1
COL21A1-212ENST00000535941 BASP1P80723 227 aaKnown RBP8.15□□□□□ -1.1
COL21A1-212ENST00000535941 COG7P83436 770 aa8.15□□□□□ -1.1
COL21A1-212ENST00000535941 ACVR1Q04771 509 aa8.15□□□□□ -1.1
COL21A1-212ENST00000535941 SERINC3Q13530 473 aa8.15□□□□□ -1.1
COL21A1-212ENST00000535941 PARP15Q460N3 678 aa8.15□□□□□ -1.1
COL21A1-212ENST00000535941 TIGD7Q6NT04 549 aaPredicted RBP8.15□□□□□ -1.1
COL21A1-212ENST00000535941 PGBD5Q8N414 524 aa8.15□□□□□ -1.1
COL21A1-212ENST00000535941 KIAA1958Q8N8K9 716 aa8.15□□□□□ -1.1
COL21A1-212ENST00000535941 ATP6V0D2Q8N8Y2 350 aa8.15□□□□□ -1.1
COL21A1-212ENST00000535941 CKAP2Q8WWK9 683 aa8.15□□□□□ -1.1
COL21A1-212ENST00000535941 TRIB3Q96RU7 358 aa8.15□□□□□ -1.1
COL21A1-212ENST00000535941 PAFAH2Q99487 392 aa8.15□□□□□ -1.1
COL21A1-212ENST00000535941 NAT9Q9BTE0 207 aa8.15□□□□□ -1.1
COL21A1-212ENST00000535941 NOD2Q9HC29 1040 aa8.15□□□□□ -1.1
COL21A1-212ENST00000535941 ZNF334Q9HCZ1 680 aaPredicted RBP8.15□□□□□ -1.1
COL21A1-212ENST00000535941 TREX1Q9NSU2 369 aa8.15□□□□□ -1.1
COL21A1-212ENST00000535941 INSL5Q9Y5Q6 135 aa8.15□□□□□ -1.1
COL21A1-212ENST00000535941 CHD7Q9P2D1 2997 aa8.15□□□□□ -1.1
COL21A1-212ENST00000535941 FAM237BA0A1B0GVD1 139 aa8.15□□□□□ -1.1
COL21A1-212ENST00000535941 GOLGA6L10A6NI86 522 aa8.15□□□□□ -1.1
COL21A1-212ENST00000535941 RFPL1O75677 317 aa8.15□□□□□ -1.1
COL21A1-212ENST00000535941 STC2O76061 302 aa8.15□□□□□ -1.1
COL21A1-212ENST00000535941 MAP3K6O95382 1288 aa8.15□□□□□ -1.1
COL21A1-212ENST00000535941 CD160O95971 181 aa8.15□□□□□ -1.1
COL21A1-212ENST00000535941 FAM107AO95990 144 aa8.15□□□□□ -1.1
COL21A1-212ENST00000535941 HLA-DQB2P05538 268 aa8.15□□□□□ -1.1
COL21A1-212ENST00000535941 CR2P20023 1033 aa8.15□□□□□ -1.1
COL21A1-212ENST00000535941 WEE1P30291 646 aa8.15□□□□□ -1.1
COL21A1-212ENST00000535941 HPDP32754 393 aaPredicted RBP8.15□□□□□ -1.1
COL21A1-212ENST00000535941 SLC7A9P82251 487 aa8.15□□□□□ -1.1
COL21A1-212ENST00000535941 CGB2Q6NT52 195 aa8.15□□□□□ -1.1
COL21A1-212ENST00000535941 RANBP10Q6VN20 620 aa8.15□□□□□ -1.1
COL21A1-212ENST00000535941 B4GALNT2Q8NHY0 566 aa8.15□□□□□ -1.1
COL21A1-212ENST00000535941 ARRDC2Q8TBH0 407 aa8.15□□□□□ -1.1
COL21A1-212ENST00000535941 PYROXD1Q8WU10 500 aa8.15□□□□□ -1.1
COL21A1-212ENST00000535941 PTCD2Q8WV60 388 aaKnown RBP8.15□□□□□ -1.1
COL21A1-212ENST00000535941 ARHGEF2Q92974 986 aaKnown RBP8.15□□□□□ -1.1
COL21A1-212ENST00000535941 DNAJC17Q9NVM6 304 aaKnown RBP8.15□□□□□ -1.1
COL21A1-212ENST00000535941 MARCH2Q9P0N8 246 aa8.15□□□□□ -1.1
COL21A1-212ENST00000535941 SOX13Q9UN79 622 aa8.15□□□□□ -1.1
COL21A1-212ENST00000535941 ASB3Q9Y575 518 aa8.15□□□□□ -1.1
COL21A1-212ENST00000535941 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.15□□□□□ -1.1
COL21A1-212ENST00000535941 LOC285095A0A1B0GVY8 99 aa8.14□□□□□ -1.11
COL21A1-212ENST00000535941 PSMD3O43242 534 aa8.14□□□□□ -1.11
COL21A1-212ENST00000535941 PRAMEF11O60813 436 aa8.14□□□□□ -1.11
COL21A1-212ENST00000535941 CNTN5O94779 1100 aa8.14□□□□□ -1.11
COL21A1-212ENST00000535941 TBX18O95935 607 aa8.14□□□□□ -1.11
COL21A1-212ENST00000535941 EPHB2P29323 1055 aa8.14□□□□□ -1.11
COL21A1-212ENST00000535941 OR1D2P34982 312 aa8.14□□□□□ -1.11
COL21A1-212ENST00000535941 PAPOLAP51003 745 aaKnown RBP8.14□□□□□ -1.11
COL21A1-212ENST00000535941 WDR4P57081 412 aaKnown RBP8.14□□□□□ -1.11
COL21A1-212ENST00000535941 IL10RBQ08334 325 aa8.14□□□□□ -1.11
COL21A1-212ENST00000535941 CAMK1Q14012 370 aa8.14□□□□□ -1.11
COL21A1-212ENST00000535941 HNRNPDQ14103 355 aaKnown RBP8.14□□□□□ -1.11
COL21A1-212ENST00000535941 SLC5A9Q2M3M2 681 aa8.14□□□□□ -1.11
COL21A1-212ENST00000535941 TBC1D25Q3MII6 688 aa8.14□□□□□ -1.11
COL21A1-212ENST00000535941 C3orf62Q6ZUJ4 267 aa8.14□□□□□ -1.11
COL21A1-212ENST00000535941 ANKMY2Q8IV38 441 aa8.14□□□□□ -1.11
COL21A1-212ENST00000535941 OR6Y1Q8NGX8 325 aa8.14□□□□□ -1.11
COL21A1-212ENST00000535941 WBP2Q969T9 261 aa8.14□□□□□ -1.11
COL21A1-212ENST00000535941 ALG14Q96F25 216 aa8.14□□□□□ -1.11
COL21A1-212ENST00000535941 MRGPRX2Q96LB1 330 aa8.14□□□□□ -1.11
COL21A1-212ENST00000535941 NSMCE3Q96MG7 304 aa8.14□□□□□ -1.11
COL21A1-212ENST00000535941 FCRL3Q96P31 734 aaPredicted RBP8.14□□□□□ -1.11
COL21A1-212ENST00000535941 BEGAINQ9BUH8 593 aa8.14□□□□□ -1.11
COL21A1-212ENST00000535941 RNF38Q9H0F5 515 aa8.14□□□□□ -1.11
COL21A1-212ENST00000535941 LRRC40Q9H9A6 602 aa8.14□□□□□ -1.11
COL21A1-212ENST00000535941 DNMT3LQ9UJW3 386 aa8.14□□□□□ -1.11
COL21A1-212ENST00000535941 GOLGA8MH3BSY2 632 aa8.14□□□□□ -1.11
COL21A1-212ENST00000535941 CPB1P15086 417 aa8.14□□□□□ -1.11
COL21A1-212ENST00000535941 TACR2P21452 398 aa8.14□□□□□ -1.11
COL21A1-212ENST00000535941 ARNTP27540 789 aa8.14□□□□□ -1.11
COL21A1-212ENST00000535941 HOXA9P31269 272 aa8.14□□□□□ -1.11
COL21A1-212ENST00000535941 ARCN1P48444 511 aaKnown RBP8.14□□□□□ -1.11
COL21A1-212ENST00000535941 YBEYP58557 167 aaPredicted RBP8.14□□□□□ -1.11
COL21A1-212ENST00000535941 PPIGQ13427 754 aaKnown RBP eCLIP8.14□□□□□ -1.11
COL21A1-212ENST00000535941 KBTBD12Q3ZCT8 623 aa8.14□□□□□ -1.11
COL21A1-212ENST00000535941 SPANXN3Q5MJ09 141 aa8.14□□□□□ -1.11
COL21A1-212ENST00000535941 TTC39BQ5VTQ0 682 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms