RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 PAXBP1Q9Y5B6 917 aa11.51□□□□□ -0.57
CLSTN3-206ENST00000535668 HS3ST4Q9Y661 456 aa11.51□□□□□ -0.57
CLSTN3-206ENST00000535668 CSNK1G3Q9Y6M4 447 aa11.51□□□□□ -0.57
CLSTN3-206ENST00000535668 TRPM6Q9BX84 2022 aa11.5□□□□□ -0.57
CLSTN3-206ENST00000535668 TEX51A0A1B0GUA7 166 aa11.5□□□□□ -0.57
CLSTN3-206ENST00000535668 FAM47DPA6NHR8 397 aa11.5□□□□□ -0.57
CLSTN3-206ENST00000535668 I6L893 689 aaPredicted RBP11.5□□□□□ -0.57
CLSTN3-206ENST00000535668 AP1G1O43747 822 aa11.5□□□□□ -0.57
CLSTN3-206ENST00000535668 PAGE1O75459 146 aa11.5□□□□□ -0.57
CLSTN3-206ENST00000535668 ZNF821O75541 412 aaPredicted RBP11.5□□□□□ -0.57
CLSTN3-206ENST00000535668 DAB1O75553 588 aa11.5□□□□□ -0.57
CLSTN3-206ENST00000535668 ENDOD1O94919 500 aa11.5□□□□□ -0.57
CLSTN3-206ENST00000535668 MOCS2O96007 188 aaPredicted RBP11.5□□□□□ -0.57
CLSTN3-206ENST00000535668 CALCAP01258 141 aa11.5□□□□□ -0.57
CLSTN3-206ENST00000535668 PRNPP04156 253 aa11.5□□□□□ -0.57
CLSTN3-206ENST00000535668 SRCP12931 536 aa11.5□□□□□ -0.57
CLSTN3-206ENST00000535668 VAV1P15498 845 aa11.5□□□□□ -0.57
CLSTN3-206ENST00000535668 DGKAP23743 735 aa11.5□□□□□ -0.57
CLSTN3-206ENST00000535668 METAP1P53582 386 aa11.5□□□□□ -0.57
CLSTN3-206ENST00000535668 KRT83P78385 493 aa11.5□□□□□ -0.57
CLSTN3-206ENST00000535668 SLC6A3Q01959 620 aa11.5□□□□□ -0.57
CLSTN3-206ENST00000535668 NRG1Q02297 640 aaPredicted RBP11.5□□□□□ -0.57
CLSTN3-206ENST00000535668 KCNMA1Q12791 1236 aa11.5□□□□□ -0.57
CLSTN3-206ENST00000535668 DNAJC3Q13217 504 aa11.5□□□□□ -0.57
CLSTN3-206ENST00000535668 TBC1D25Q3MII6 688 aa11.5□□□□□ -0.57
CLSTN3-206ENST00000535668 PRAMEF14Q5SWL7 426 aa11.5□□□□□ -0.57
CLSTN3-206ENST00000535668 ERICH1Q86X53 443 aa11.5□□□□□ -0.57
CLSTN3-206ENST00000535668 MARCH9Q86YJ5 346 aa11.5□□□□□ -0.57
CLSTN3-206ENST00000535668 IRF2BP1Q8IU81 584 aa11.5□□□□□ -0.57
CLSTN3-206ENST00000535668 FAM71AQ8IYT1 594 aa11.5□□□□□ -0.57
CLSTN3-206ENST00000535668 LSMEM2Q8N112 164 aa11.5□□□□□ -0.57
CLSTN3-206ENST00000535668 BAP1Q92560 729 aa11.5□□□□□ -0.57
CLSTN3-206ENST00000535668 ISG20Q96AZ6 181 aaKnown RBP11.5□□□□□ -0.57
CLSTN3-206ENST00000535668 KLHDC7BQ96G42 594 aa11.5□□□□□ -0.57
CLSTN3-206ENST00000535668 LRIG1Q96JA1 1093 aa11.5□□□□□ -0.57
CLSTN3-206ENST00000535668 TBATAQ96M53 351 aa11.5□□□□□ -0.57
CLSTN3-206ENST00000535668 ZNF578Q96N58 590 aaPredicted RBP11.5□□□□□ -0.57
CLSTN3-206ENST00000535668 RPRD1AQ96P16 312 aaPredicted RBP11.5□□□□□ -0.57
CLSTN3-206ENST00000535668 LENG8Q96PV6 779 aaPredicted RBP11.5□□□□□ -0.57
CLSTN3-206ENST00000535668 PSMB7Q99436 277 aa11.5□□□□□ -0.57
CLSTN3-206ENST00000535668 RWDD2AQ9UIY3 292 aa11.5□□□□□ -0.57
CLSTN3-206ENST00000535668 SLC25A13Q9UJS0 675 aa11.5□□□□□ -0.57
CLSTN3-206ENST00000535668 CLCA2Q9UQC9 943 aa11.5□□□□□ -0.57
CLSTN3-206ENST00000535668 NAV2Q8IVL1 2488 aa11.5□□□□□ -0.57
CLSTN3-206ENST00000535668 SHROOM3Q8TF72 1996 aa11.5□□□□□ -0.57
CLSTN3-206ENST00000535668 PIEZO2Q9H5I5 2752 aa11.5□□□□□ -0.57
CLSTN3-206ENST00000535668 MYO18BQ8IUG5 2567 aa11.49□□□□□ -0.57
CLSTN3-206ENST00000535668 ILVBLA1L0T0 632 aa11.49□□□□□ -0.57
CLSTN3-206ENST00000535668 TRIM38O00635 465 aa11.49□□□□□ -0.57
CLSTN3-206ENST00000535668 RRP8O43159 456 aaKnown RBP11.49□□□□□ -0.57
CLSTN3-206ENST00000535668 SIGLEC6O43699 453 aa11.49□□□□□ -0.57
CLSTN3-206ENST00000535668 ZMPSTE24O75844 475 aa11.49□□□□□ -0.57
CLSTN3-206ENST00000535668 CTSLP07711 333 aa11.49□□□□□ -0.57
CLSTN3-206ENST00000535668 CHRNA3P32297 505 aa11.49□□□□□ -0.57
CLSTN3-206ENST00000535668 ACTN2P35609 894 aa11.49□□□□□ -0.57
CLSTN3-206ENST00000535668 MLLT3P42568 568 aaPredicted RBP11.49□□□□□ -0.57
CLSTN3-206ENST00000535668 BPIFB4P59827 614 aa11.49□□□□□ -0.57
CLSTN3-206ENST00000535668 ERVPABLB-1P60509 514 aa11.49□□□□□ -0.57
CLSTN3-206ENST00000535668 SKOR1P84550 965 aa11.49□□□□□ -0.57
CLSTN3-206ENST00000535668 IL9RQ01113 521 aa11.49□□□□□ -0.57
CLSTN3-206ENST00000535668 TLE3Q04726 772 aa11.49□□□□□ -0.57
CLSTN3-206ENST00000535668 PTK2Q05397 1052 aa11.49□□□□□ -0.57
CLSTN3-206ENST00000535668 VOPP1Q96AW1 172 aa11.49□□□□□ -0.57
CLSTN3-206ENST00000535668 CCDC114Q96M63 670 aa11.49□□□□□ -0.57
CLSTN3-206ENST00000535668 HAPLN3Q96S86 360 aa11.49□□□□□ -0.57
CLSTN3-206ENST00000535668 DUSP23Q9BVJ7 150 aa11.49□□□□□ -0.57
CLSTN3-206ENST00000535668 ACP6Q9NPH0 428 aa11.49□□□□□ -0.57
CLSTN3-206ENST00000535668 NLGN3Q9NZ94 848 aa11.49□□□□□ -0.57
CLSTN3-206ENST00000535668 NCKIPSDQ9NZQ3 722 aa11.49□□□□□ -0.57
CLSTN3-206ENST00000535668 PPARGC1AQ9UBK2 798 aaKnown RBP11.49□□□□□ -0.57
CLSTN3-206ENST00000535668 VPS28Q9UK41 221 aa11.49□□□□□ -0.57
CLSTN3-206ENST00000535668 FARP1Q9Y4F1 1045 aaPredicted RBP11.49□□□□□ -0.57
CLSTN3-206ENST00000535668 CEP83Q9Y592 693 aa11.49□□□□□ -0.57
CLSTN3-206ENST00000535668 TENM4Q6N022 2769 aa11.48□□□□□ -0.57
CLSTN3-206ENST00000535668 LY6G6EA0A0G2JKS1 128 aa11.48□□□□□ -0.57
CLSTN3-206ENST00000535668 NEMP2A6NFY4 417 aa11.48□□□□□ -0.57
CLSTN3-206ENST00000535668 CBX4O00257 560 aa11.48□□□□□ -0.57
CLSTN3-206ENST00000535668 TOR1BO14657 336 aa11.48□□□□□ -0.57
CLSTN3-206ENST00000535668 TPP1O14773 563 aa11.48□□□□□ -0.57
CLSTN3-206ENST00000535668 SCAMP1O15126 338 aa11.48□□□□□ -0.57
CLSTN3-206ENST00000535668 THAP12O43422 761 aa11.48□□□□□ -0.57
CLSTN3-206ENST00000535668 PIAS2O75928 621 aa11.48□□□□□ -0.57
CLSTN3-206ENST00000535668 MT-CO1P00395 513 aa11.48□□□□□ -0.57
CLSTN3-206ENST00000535668 KRT5P13647 590 aa11.48□□□□□ -0.57
CLSTN3-206ENST00000535668 HNRNPA2B1P22626 353 aaKnown RBP11.48□□□□□ -0.57
CLSTN3-206ENST00000535668 PON1P27169 355 aa11.48□□□□□ -0.57
CLSTN3-206ENST00000535668 CLCN1P35523 988 aa11.48□□□□□ -0.57
CLSTN3-206ENST00000535668 LSSP48449 732 aa11.48□□□□□ -0.57
CLSTN3-206ENST00000535668 IRAK1P51617 712 aa11.48□□□□□ -0.57
CLSTN3-206ENST00000535668 EXOC3L4Q17RC7 722 aa11.48□□□□□ -0.57
CLSTN3-206ENST00000535668 SLC25A52Q3SY17 297 aa11.48□□□□□ -0.57
CLSTN3-206ENST00000535668 PTPN20Q4JDL3 420 aa11.48□□□□□ -0.57
CLSTN3-206ENST00000535668 KIAA1161Q6NSJ0 714 aa11.48□□□□□ -0.57
CLSTN3-206ENST00000535668 GBP6Q6ZN66 633 aa11.48□□□□□ -0.57
CLSTN3-206ENST00000535668 LRRC69Q6ZNQ3 347 aa11.48□□□□□ -0.57
CLSTN3-206ENST00000535668 Q6ZVU0 165 aa11.48□□□□□ -0.57
CLSTN3-206ENST00000535668 ERN2Q76MJ5 926 aaKnown RBP11.48□□□□□ -0.57
CLSTN3-206ENST00000535668 C14orf80Q86SX3 495 aa11.48□□□□□ -0.57
CLSTN3-206ENST00000535668 C1QTNF2Q9BXJ5 285 aa11.48□□□□□ -0.57
CLSTN3-206ENST00000535668 FAM204AQ9H8W3 233 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms