RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 PAFAH1B1P43034 410 aa15.89■□□□□ 0.13
CNN1-202ENST00000535659 KIR2DL1P43626 348 aaPredicted RBP15.89■□□□□ 0.13
CNN1-202ENST00000535659 VASPP50552 380 aaPredicted RBP15.89■□□□□ 0.13
CNN1-202ENST00000535659 GEMIN4P57678 1058 aaKnown RBP15.89■□□□□ 0.13
CNN1-202ENST00000535659 EIF3EP60228 445 aaKnown RBP15.89■□□□□ 0.13
CNN1-202ENST00000535659 PPIDQ08752 370 aaKnown RBP15.89■□□□□ 0.13
CNN1-202ENST00000535659 UBXN2BQ14CS0 331 aa15.89■□□□□ 0.13
CNN1-202ENST00000535659 CCNG2Q16589 344 aa15.89■□□□□ 0.13
CNN1-202ENST00000535659 PTPRNQ16849 979 aa15.89■□□□□ 0.13
CNN1-202ENST00000535659 LINGO4Q6UY18 593 aa15.89■□□□□ 0.13
CNN1-202ENST00000535659 LEKR1Q6ZMV7 388 aa15.89■□□□□ 0.13
CNN1-202ENST00000535659 LRRN4Q8WUT4 740 aa15.89■□□□□ 0.13
CNN1-202ENST00000535659 TFB1MQ8WVM0 346 aaKnown RBP15.89■□□□□ 0.13
CNN1-202ENST00000535659 C1orf54Q8WWF1 131 aa15.89■□□□□ 0.13
CNN1-202ENST00000535659 MRGPRX3Q96LB0 322 aa15.89■□□□□ 0.13
CNN1-202ENST00000535659 ZNF599Q96NL3 588 aa15.89■□□□□ 0.13
CNN1-202ENST00000535659 FAM118BQ9BPY3 351 aa15.89■□□□□ 0.13
CNN1-202ENST00000535659 TBC1D17Q9HA65 648 aa15.89■□□□□ 0.13
CNN1-202ENST00000535659 LMAN1LQ9HAT1 526 aa15.89■□□□□ 0.13
CNN1-202ENST00000535659 HOMER3Q9NSC5 361 aa15.89■□□□□ 0.13
CNN1-202ENST00000535659 THAP10Q9P2Z0 257 aaPredicted RBP15.89■□□□□ 0.13
CNN1-202ENST00000535659 SLCO3A1Q9UIG8 710 aa15.89■□□□□ 0.13
CNN1-202ENST00000535659 ANTXRLA6NF34 631 aa15.89■□□□□ 0.13
CNN1-202ENST00000535659 H7C0C1 242 aa15.89■□□□□ 0.13
CNN1-202ENST00000535659 MCF2LO15068 1137 aa15.89■□□□□ 0.13
CNN1-202ENST00000535659 NPC1O15118 1278 aa15.89■□□□□ 0.13
CNN1-202ENST00000535659 RBP3P10745 1247 aa15.89■□□□□ 0.13
CNN1-202ENST00000535659 TARSP26639 723 aaKnown RBP15.89■□□□□ 0.13
CNN1-202ENST00000535659 ATP5OP48047 213 aa15.89■□□□□ 0.13
CNN1-202ENST00000535659 SEC13P55735 322 aa15.89■□□□□ 0.13
CNN1-202ENST00000535659 ST8SIA6P61647 398 aa15.89■□□□□ 0.13
CNN1-202ENST00000535659 MRPS21P82921 87 aaKnown RBP15.89■□□□□ 0.13
CNN1-202ENST00000535659 AP1B1Q10567 949 aa15.89■□□□□ 0.13
CNN1-202ENST00000535659 INO80DQ53TQ3 878 aaPredicted RBP15.89■□□□□ 0.13
CNN1-202ENST00000535659 TIGD7Q6NT04 549 aaPredicted RBP15.89■□□□□ 0.13
CNN1-202ENST00000535659 B4GALNT4Q76KP1 1039 aa15.89■□□□□ 0.13
CNN1-202ENST00000535659 CCDC13Q8IYE1 715 aa15.89■□□□□ 0.13
CNN1-202ENST00000535659 SYNPOQ8N3V7 929 aa15.89■□□□□ 0.13
CNN1-202ENST00000535659 ATP11CQ8NB49 1132 aa15.89■□□□□ 0.13
CNN1-202ENST00000535659 KDM1BQ8NB78 822 aa15.89■□□□□ 0.13
CNN1-202ENST00000535659 SLC35B2Q8TB61 432 aa15.89■□□□□ 0.13
CNN1-202ENST00000535659 NSMCE1Q8WV22 266 aa15.89■□□□□ 0.13
CNN1-202ENST00000535659 CASKIN2Q8WXE0 1202 aa15.89■□□□□ 0.13
CNN1-202ENST00000535659 FATE1Q969F0 183 aa15.89■□□□□ 0.13
CNN1-202ENST00000535659 AP1M1Q9BXS5 423 aa15.89■□□□□ 0.13
CNN1-202ENST00000535659 OSBPL6Q9BZF3 934 aa15.89■□□□□ 0.13
CNN1-202ENST00000535659 PDFQ9HBH1 243 aa15.89■□□□□ 0.13
CNN1-202ENST00000535659 SMARCAL1Q9NZC9 954 aa15.89■□□□□ 0.13
CNN1-202ENST00000535659 UBA2Q9UBT2 640 aaPredicted RBP15.89■□□□□ 0.13
CNN1-202ENST00000535659 CDC23Q9UJX2 597 aa15.89■□□□□ 0.13
CNN1-202ENST00000535659 HS3ST2Q9Y278 367 aa15.89■□□□□ 0.13
CNN1-202ENST00000535659 ACTL7AQ9Y615 435 aa15.89■□□□□ 0.13
CNN1-202ENST00000535659 MIA3Q5JRA6 1907 aa15.88■□□□□ 0.13
CNN1-202ENST00000535659 KRIT1O00522 736 aa15.88■□□□□ 0.13
CNN1-202ENST00000535659 PEX11BO96011 259 aa15.88■□□□□ 0.13
CNN1-202ENST00000535659 TIE1P35590 1138 aa15.88■□□□□ 0.13
CNN1-202ENST00000535659 STK19P49842 368 aaPredicted RBP15.88■□□□□ 0.13
CNN1-202ENST00000535659 FZD5Q13467 585 aa15.88■□□□□ 0.13
CNN1-202ENST00000535659 TUBB2AQ13885 445 aa15.88■□□□□ 0.13
CNN1-202ENST00000535659 HNRNPDQ14103 355 aaKnown RBP15.88■□□□□ 0.13
CNN1-202ENST00000535659 LRRC32Q14392 662 aa15.88■□□□□ 0.13
CNN1-202ENST00000535659 ZNF234Q14588 700 aa15.88■□□□□ 0.13
CNN1-202ENST00000535659 PRKD1Q15139 912 aaPredicted RBP15.88■□□□□ 0.13
CNN1-202ENST00000535659 C2orf27AQ580R0 203 aa15.88■□□□□ 0.13
CNN1-202ENST00000535659 EGFLAMQ63HQ2 1017 aa15.88■□□□□ 0.13
CNN1-202ENST00000535659 DARS2Q6PI48 645 aaKnown RBP15.88■□□□□ 0.13
CNN1-202ENST00000535659 METTL3Q86U44 580 aaKnown RBP15.88■□□□□ 0.13
CNN1-202ENST00000535659 SH2D3CQ8N5H7 860 aa15.88■□□□□ 0.13
CNN1-202ENST00000535659 ZNF513Q8N8E2 541 aaPredicted RBP15.88■□□□□ 0.13
CNN1-202ENST00000535659 PRELID2Q8N945 189 aa15.88■□□□□ 0.13
CNN1-202ENST00000535659 USP33Q8TEY7 942 aa15.88■□□□□ 0.13
CNN1-202ENST00000535659 ATG4AQ8WYN0 398 aa15.88■□□□□ 0.13
CNN1-202ENST00000535659 MYO19Q96H55 970 aa15.88■□□□□ 0.13
CNN1-202ENST00000535659 TUBB2BQ9BVA1 445 aa15.88■□□□□ 0.13
CNN1-202ENST00000535659 FOXQ1Q9C009 403 aa15.88■□□□□ 0.13
CNN1-202ENST00000535659 RBM12Q9NTZ6 932 aaKnown RBP15.88■□□□□ 0.13
CNN1-202ENST00000535659 DNPEPQ9ULA0 475 aa15.88■□□□□ 0.13
CNN1-202ENST00000535659 CHD5Q8TDI0 1954 aa15.87■□□□□ 0.13
CNN1-202ENST00000535659 BCLAF3A2AJT9 711 aaKnown RBP15.87■□□□□ 0.13
CNN1-202ENST00000535659 K7ERQ8 282 aa15.87■□□□□ 0.13
CNN1-202ENST00000535659 PDE2AO00408 941 aaPredicted RBP15.87■□□□□ 0.13
CNN1-202ENST00000535659 SMAD6O43541 496 aaKnown RBP15.87■□□□□ 0.13
CNN1-202ENST00000535659 LIASO43766 372 aa15.87■□□□□ 0.13
CNN1-202ENST00000535659 ATP9BO43861 1147 aa15.87■□□□□ 0.13
CNN1-202ENST00000535659 SRCP12931 536 aa15.87■□□□□ 0.13
CNN1-202ENST00000535659 CCNB1P14635 433 aa15.87■□□□□ 0.13
CNN1-202ENST00000535659 SERPINH1P50454 418 aaKnown RBP15.87■□□□□ 0.13
CNN1-202ENST00000535659 RENBPP51606 427 aa15.87■□□□□ 0.13
CNN1-202ENST00000535659 CLCN6P51797 869 aa15.87■□□□□ 0.13
CNN1-202ENST00000535659 SLC10A7Q0GE19 358 aa15.87■□□□□ 0.13
CNN1-202ENST00000535659 BYSLQ13895 437 aaKnown RBP15.87■□□□□ 0.13
CNN1-202ENST00000535659 RFTN1Q14699 578 aaPredicted RBP15.87■□□□□ 0.13
CNN1-202ENST00000535659 LBRQ14739 615 aaKnown RBP15.87■□□□□ 0.13
CNN1-202ENST00000535659 CYTH1Q15438 398 aa15.87■□□□□ 0.13
CNN1-202ENST00000535659 DLG2Q15700 870 aa15.87■□□□□ 0.13
CNN1-202ENST00000535659 ACCSLQ4AC99 568 aa15.87■□□□□ 0.13
CNN1-202ENST00000535659 FNDC3BQ53EP0 1204 aaKnown RBP15.87■□□□□ 0.13
CNN1-202ENST00000535659 SLC45A4Q5BKX6 768 aa15.87■□□□□ 0.13
CNN1-202ENST00000535659 MARC1Q5VT66 337 aa15.87■□□□□ 0.13
CNN1-202ENST00000535659 DRICH1Q6PGQ1 229 aaPredicted RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms