RNA–Protein interactions for RNA: ENST00000535601.5

HTATSF1-204, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 3,019 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-204ENST00000535601 ITGA2BP08514 1039 aa18.6■□□□□ 0.57
HTATSF1-204ENST00000535601 PAX3P23760 479 aa18.6■□□□□ 0.57
HTATSF1-204ENST00000535601 CCNCP24863 283 aa18.6■□□□□ 0.57
HTATSF1-204ENST00000535601 HOXC13P31276 330 aa18.6■□□□□ 0.57
HTATSF1-204ENST00000535601 SLC6A4P31645 630 aa18.6■□□□□ 0.57
HTATSF1-204ENST00000535601 SGSHP51688 502 aa18.6■□□□□ 0.57
HTATSF1-204ENST00000535601 MSANTD2Q6P1R3 559 aa18.6■□□□□ 0.57
HTATSF1-204ENST00000535601 APBB2Q92870 758 aa18.6■□□□□ 0.57
HTATSF1-204ENST00000535601 PAWRQ96IZ0 340 aaKnown RBP18.6■□□□□ 0.57
HTATSF1-204ENST00000535601 CYP2S1Q96SQ9 504 aa18.6■□□□□ 0.57
HTATSF1-204ENST00000535601 MRPL9Q9BYD2 267 aaKnown RBP18.6■□□□□ 0.57
HTATSF1-204ENST00000535601 VPS11Q9H270 941 aa18.6■□□□□ 0.57
HTATSF1-204ENST00000535601 TRHDEQ9UKU6 1024 aa18.6■□□□□ 0.57
HTATSF1-204ENST00000535601 C2orf78A6NCI8 922 aa18.59■□□□□ 0.57
HTATSF1-204ENST00000535601 FGF10O15520 208 aaPredicted RBP18.59■□□□□ 0.57
HTATSF1-204ENST00000535601 TSPAN3O60637 253 aa18.59■□□□□ 0.57
HTATSF1-204ENST00000535601 CXCL10P02778 98 aa18.59■□□□□ 0.57
HTATSF1-204ENST00000535601 RPS24P62847 133 aaKnown RBP18.59■□□□□ 0.57
HTATSF1-204ENST00000535601 PDE1CQ14123 709 aaPredicted RBP18.59■□□□□ 0.57
HTATSF1-204ENST00000535601 IKBKEQ14164 716 aa18.59■□□□□ 0.57
HTATSF1-204ENST00000535601 USP41Q3LFD5 358 aa18.59■□□□□ 0.57
HTATSF1-204ENST00000535601 OTOP2Q7RTS6 562 aa18.59■□□□□ 0.57
HTATSF1-204ENST00000535601 DENND1CQ8IV53 801 aa18.59■□□□□ 0.57
HTATSF1-204ENST00000535601 LGI2Q8N0V4 545 aa18.59■□□□□ 0.57
HTATSF1-204ENST00000535601 KIF2BQ8N4N8 673 aa18.59■□□□□ 0.57
HTATSF1-204ENST00000535601 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.59■□□□□ 0.57
HTATSF1-204ENST00000535601 ZYG11BQ9C0D3 744 aa18.59■□□□□ 0.57
HTATSF1-204ENST00000535601 LRRC40Q9H9A6 602 aa18.59■□□□□ 0.57
HTATSF1-204ENST00000535601 PRDM16Q9HAZ2 1276 aa18.59■□□□□ 0.57
HTATSF1-204ENST00000535601 HAUS2Q9NVX0 235 aa18.59■□□□□ 0.57
HTATSF1-204ENST00000535601 A0A0G2JND7 137 aa18.59■□□□□ 0.57
HTATSF1-204ENST00000535601 GLDCP23378 1020 aa18.59■□□□□ 0.57
HTATSF1-204ENST00000535601 CD86P42081 329 aa18.59■□□□□ 0.57
HTATSF1-204ENST00000535601 PRMT2P55345 433 aa18.59■□□□□ 0.57
HTATSF1-204ENST00000535601 IRF9Q00978 393 aa18.59■□□□□ 0.57
HTATSF1-204ENST00000535601 TBL1YQ9BQ87 522 aa18.59■□□□□ 0.57
HTATSF1-204ENST00000535601 C20orf27Q9GZN8 174 aa18.59■□□□□ 0.57
HTATSF1-204ENST00000535601 TXNDC16Q9P2K2 825 aa18.59■□□□□ 0.57
HTATSF1-204ENST00000535601 PRKAG3Q9UGI9 489 aa18.59■□□□□ 0.57
HTATSF1-204ENST00000535601 ZNF180Q9UJW8 692 aa18.59■□□□□ 0.57
HTATSF1-204ENST00000535601 ARL2BPQ9Y2Y0 163 aa18.59■□□□□ 0.57
HTATSF1-204ENST00000535601 PLLPQ9Y342 182 aa18.59■□□□□ 0.57
HTATSF1-204ENST00000535601 BUD23O43709 281 aaKnown RBP18.58■□□□□ 0.57
HTATSF1-204ENST00000535601 KCNA4P22459 653 aa18.58■□□□□ 0.57
HTATSF1-204ENST00000535601 OR1E1P30953 314 aa18.58■□□□□ 0.57
HTATSF1-204ENST00000535601 AVPR1AP37288 418 aa18.58■□□□□ 0.57
HTATSF1-204ENST00000535601 ITIH4Q14624 930 aa18.58■□□□□ 0.57
HTATSF1-204ENST00000535601 TRIP4Q15650 581 aaPredicted RBP18.58■□□□□ 0.57
HTATSF1-204ENST00000535601 LRRC26Q2I0M4 334 aa18.58■□□□□ 0.57
HTATSF1-204ENST00000535601 ESRP1Q6NXG1 681 aaKnown RBP18.58■□□□□ 0.57
HTATSF1-204ENST00000535601 ANKRD33Q7Z3H0 272 aa18.58■□□□□ 0.57
HTATSF1-204ENST00000535601 SPATS2Q86XZ4 545 aaKnown RBP18.58■□□□□ 0.57
HTATSF1-204ENST00000535601 DENND6AQ8IWF6 608 aa18.58■□□□□ 0.57
HTATSF1-204ENST00000535601 FSD1LQ9BXM9 530 aa18.58■□□□□ 0.57
HTATSF1-204ENST00000535601 IL37Q9NZH6 218 aa18.58■□□□□ 0.57
HTATSF1-204ENST00000535601 MTO1Q9Y2Z2 717 aaKnown RBP18.58■□□□□ 0.57
HTATSF1-204ENST00000535601 TM9SF1O15321 606 aa18.58■□□□□ 0.56
HTATSF1-204ENST00000535601 DNAJC6O75061 913 aa18.58■□□□□ 0.56
HTATSF1-204ENST00000535601 RPL10AP62906 217 aaKnown RBP18.58■□□□□ 0.56
HTATSF1-204ENST00000535601 COG7P83436 770 aa18.58■□□□□ 0.56
HTATSF1-204ENST00000535601 CTBP1Q13363 440 aa18.58■□□□□ 0.56
HTATSF1-204ENST00000535601 KCNMB4Q86W47 210 aa18.58■□□□□ 0.56
HTATSF1-204ENST00000535601 EXOC2Q96KP1 924 aa18.58■□□□□ 0.56
HTATSF1-204ENST00000535601 IL12RB2Q99665 862 aa18.58■□□□□ 0.56
HTATSF1-204ENST00000535601 RNF38Q9H0F5 515 aa18.58■□□□□ 0.56
HTATSF1-204ENST00000535601 SP110Q9HB58 689 aa18.58■□□□□ 0.56
HTATSF1-204ENST00000535601 RAD54BQ9Y620 910 aa18.58■□□□□ 0.56
HTATSF1-204ENST00000535601 MYO9BQ13459 2157 aa18.58■□□□□ 0.56
HTATSF1-204ENST00000535601 FAM92AA1XBS5 289 aa18.58■□□□□ 0.56
HTATSF1-204ENST00000535601 RTN3O95197 1032 aaPredicted RBP18.58■□□□□ 0.56
HTATSF1-204ENST00000535601 PEX11BO96011 259 aa18.58■□□□□ 0.56
HTATSF1-204ENST00000535601 PIRTP0C851 137 aa18.58■□□□□ 0.56
HTATSF1-204ENST00000535601 PRPSAP1Q14558 356 aa18.58■□□□□ 0.56
HTATSF1-204ENST00000535601 ZNF460Q14592 562 aa18.58■□□□□ 0.56
HTATSF1-204ENST00000535601 DENND5AQ6IQ26 1287 aa18.58■□□□□ 0.56
HTATSF1-204ENST00000535601 MARK2Q7KZI7 788 aaKnown RBP18.58■□□□□ 0.56
HTATSF1-204ENST00000535601 TNS4Q8IZW8 715 aa18.58■□□□□ 0.56
HTATSF1-204ENST00000535601 PLD6Q8N2A8 252 aaKnown RBP18.58■□□□□ 0.56
HTATSF1-204ENST00000535601 DCLK2Q8N568 766 aa18.58■□□□□ 0.56
HTATSF1-204ENST00000535601 CDKL2Q92772 493 aa18.58■□□□□ 0.56
HTATSF1-204ENST00000535601 PRR11Q96HE9 360 aaPredicted RBP18.58■□□□□ 0.56
HTATSF1-204ENST00000535601 BTN2A3PQ96KV6 586 aa18.58■□□□□ 0.56
HTATSF1-204ENST00000535601 MRGPRX2Q96LB1 330 aa18.58■□□□□ 0.56
HTATSF1-204ENST00000535601 KLHL14Q9P2G3 628 aa18.58■□□□□ 0.56
HTATSF1-204ENST00000535601 MTSS1O43312 755 aa18.57■□□□□ 0.56
HTATSF1-204ENST00000535601 ACTN3Q08043 901 aaPredicted RBP18.57■□□□□ 0.56
HTATSF1-204ENST00000535601 CDH17Q12864 832 aa18.57■□□□□ 0.56
HTATSF1-204ENST00000535601 CHI3L2Q15782 390 aa18.57■□□□□ 0.56
HTATSF1-204ENST00000535601 N4BP2L1Q5TBK1 243 aaPredicted RBP18.57■□□□□ 0.56
HTATSF1-204ENST00000535601 LGSNQ5TDP6 509 aa18.57■□□□□ 0.56
HTATSF1-204ENST00000535601 C16orf59Q7L2K0 433 aa18.57■□□□□ 0.56
HTATSF1-204ENST00000535601 PGBD5Q8N414 524 aa18.57■□□□□ 0.56
HTATSF1-204ENST00000535601 SPATA6LQ8N4H0 392 aa18.57■□□□□ 0.56
HTATSF1-204ENST00000535601 ATP6V0D2Q8N8Y2 350 aa18.57■□□□□ 0.56
HTATSF1-204ENST00000535601 OR7D4Q8NG98 312 aa18.57■□□□□ 0.56
HTATSF1-204ENST00000535601 ALKBH8Q96BT7 664 aaKnown RBP18.57■□□□□ 0.56
HTATSF1-204ENST00000535601 TSSK1BQ9BXA7 367 aa18.57■□□□□ 0.56
HTATSF1-204ENST00000535601 H7C4K7 107 aa18.57■□□□□ 0.56
HTATSF1-204ENST00000535601 HOXA2O43364 376 aa18.57■□□□□ 0.56
HTATSF1-204ENST00000535601 VAPBO95292 243 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms