RNA–Protein interactions for RNA: ENST00000535527.5

CHFR-210, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 746 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-210ENST00000535527 SETD3Q86TU7 594 aaPredicted RBP13.41□□□□□ -0.26
CHFR-210ENST00000535527 RASSF3Q86WH2 238 aa13.41□□□□□ -0.26
CHFR-210ENST00000535527 CACUL1Q86Y37 369 aa13.41□□□□□ -0.26
CHFR-210ENST00000535527 PSTKQ8IV42 348 aaKnown RBP13.41□□□□□ -0.26
CHFR-210ENST00000535527 CHPFQ8IZ52 775 aa13.41□□□□□ -0.26
CHFR-210ENST00000535527 DCAF4L2Q8NA75 395 aa13.41□□□□□ -0.26
CHFR-210ENST00000535527 ALG3Q92685 438 aa13.41□□□□□ -0.26
CHFR-210ENST00000535527 EPAS1Q99814 870 aa13.41□□□□□ -0.26
CHFR-210ENST00000535527 SLC39A8Q9C0K1 460 aa13.41□□□□□ -0.26
CHFR-210ENST00000535527 MKRN2Q9H000 416 aaKnown RBP13.41□□□□□ -0.26
CHFR-210ENST00000535527 PDFQ9HBH1 243 aa13.41□□□□□ -0.26
CHFR-210ENST00000535527 PYCARDQ9ULZ3 195 aa13.41□□□□□ -0.26
CHFR-210ENST00000535527 RALGAPA1Q6GYQ0 2036 aa13.4□□□□□ -0.26
CHFR-210ENST00000535527 ILVBLA1L0T0 632 aa13.4□□□□□ -0.26
CHFR-210ENST00000535527 USP27XA6NNY8 438 aa13.4□□□□□ -0.26
CHFR-210ENST00000535527 RASA4BC9J798 803 aa13.4□□□□□ -0.26
CHFR-210ENST00000535527 RASA4O43374 803 aa13.4□□□□□ -0.26
CHFR-210ENST00000535527 PROS1P07225 676 aa13.4□□□□□ -0.26
CHFR-210ENST00000535527 TNNT1P13805 278 aa13.4□□□□□ -0.26
CHFR-210ENST00000535527 POLR2EP19388 210 aaKnown RBP13.4□□□□□ -0.26
CHFR-210ENST00000535527 NDUFV2P19404 249 aa13.4□□□□□ -0.26
CHFR-210ENST00000535527 CXCL12P48061 93 aa13.4□□□□□ -0.26
CHFR-210ENST00000535527 LPAL2Q16609 132 aa13.4□□□□□ -0.26
CHFR-210ENST00000535527 TAZQ16635 292 aa13.4□□□□□ -0.26
CHFR-210ENST00000535527 BOLA3Q53S33 107 aa13.4□□□□□ -0.26
CHFR-210ENST00000535527 N4BP2L1Q5TBK1 243 aaPredicted RBP13.4□□□□□ -0.26
CHFR-210ENST00000535527 HEATR6Q6AI08 1181 aaKnown RBP13.4□□□□□ -0.26
CHFR-210ENST00000535527 MFSD7Q6UXD7 560 aa13.4□□□□□ -0.26
CHFR-210ENST00000535527 NT5DC3Q86UY8 548 aa13.4□□□□□ -0.26
CHFR-210ENST00000535527 UMODL1-AS1Q8N2C9 162 aa13.4□□□□□ -0.26
CHFR-210ENST00000535527 CCDC112Q8NEF3 446 aa13.4□□□□□ -0.26
CHFR-210ENST00000535527 PTPRN2Q92932 1015 aa13.4□□□□□ -0.26
CHFR-210ENST00000535527 NSMCE3Q96MG7 304 aa13.4□□□□□ -0.26
CHFR-210ENST00000535527 TPSD1Q9BZJ3 242 aa13.4□□□□□ -0.26
CHFR-210ENST00000535527 MUC3BQ9H195 1237 aa13.4□□□□□ -0.26
CHFR-210ENST00000535527 PRSS16Q9NQE7 514 aa13.4□□□□□ -0.26
CHFR-210ENST00000535527 VPS28Q9UK41 221 aa13.4□□□□□ -0.26
CHFR-210ENST00000535527 TCRBV21S2A2A0A5A6 115 aa13.39□□□□□ -0.27
CHFR-210ENST00000535527 GOLGA6L6A8MZA4 724 aa13.39□□□□□ -0.27
CHFR-210ENST00000535527 J3KR12 359 aa13.39□□□□□ -0.27
CHFR-210ENST00000535527 TM4SF5O14894 197 aa13.39□□□□□ -0.27
CHFR-210ENST00000535527 DDX3YO15523 660 aaKnown RBP13.39□□□□□ -0.27
CHFR-210ENST00000535527 SIN3BO75182 1162 aa13.39□□□□□ -0.27
CHFR-210ENST00000535527 GJB3O75712 270 aa13.39□□□□□ -0.27
CHFR-210ENST00000535527 PALMO75781 387 aa13.39□□□□□ -0.27
CHFR-210ENST00000535527 FTCDO95954 541 aa13.39□□□□□ -0.27
CHFR-210ENST00000535527 PEX11BO96011 259 aa13.39□□□□□ -0.27
CHFR-210ENST00000535527 KRT1P04264 644 aa13.39□□□□□ -0.27
CHFR-210ENST00000535527 KDELR1P24390 212 aa13.39□□□□□ -0.27
CHFR-210ENST00000535527 HCAR3P49019 387 aa13.39□□□□□ -0.27
CHFR-210ENST00000535527 ECT2LQ008S8 904 aa13.39□□□□□ -0.27
CHFR-210ENST00000535527 SLC10A2Q12908 348 aaPredicted RBP13.39□□□□□ -0.27
CHFR-210ENST00000535527 CAMK2GQ13555 558 aaPredicted RBP13.39□□□□□ -0.27
CHFR-210ENST00000535527 FNDC3BQ53EP0 1204 aaKnown RBP13.39□□□□□ -0.27
CHFR-210ENST00000535527 C6orf118Q5T5N4 469 aa13.39□□□□□ -0.27
CHFR-210ENST00000535527 ANO7Q6IWH7 933 aa13.39□□□□□ -0.27
CHFR-210ENST00000535527 NPNTQ6UXI9 565 aa13.39□□□□□ -0.27
CHFR-210ENST00000535527 SERPINA13PQ6UXR4 307 aa13.39□□□□□ -0.27
CHFR-210ENST00000535527 REXO1L1PQ8IX06 675 aa13.39□□□□□ -0.27
CHFR-210ENST00000535527 SH2D3CQ8N5H7 860 aa13.39□□□□□ -0.27
CHFR-210ENST00000535527 PLD5Q8N7P1 536 aa13.39□□□□□ -0.27
CHFR-210ENST00000535527 ACDQ96AP0 544 aa13.39□□□□□ -0.27
CHFR-210ENST00000535527 RNF25Q96BH1 459 aaPredicted RBP13.39□□□□□ -0.27
CHFR-210ENST00000535527 PPP1R9BQ96SB3 815 aa13.39□□□□□ -0.27
CHFR-210ENST00000535527 ATP13A1Q9HD20 1204 aa13.39□□□□□ -0.27
CHFR-210ENST00000535527 TMEM51Q9NW97 253 aa13.39□□□□□ -0.27
CHFR-210ENST00000535527 EBF1Q9UH73 591 aa13.39□□□□□ -0.27
CHFR-210ENST00000535527 HS3ST2Q9Y278 367 aa13.39□□□□□ -0.27
CHFR-210ENST00000535527 PPP2R2CQ9Y2T4 447 aa13.39□□□□□ -0.27
CHFR-210ENST00000535527 FCF1Q9Y324 198 aaKnown RBP13.39□□□□□ -0.27
CHFR-210ENST00000535527 FRYQ5TBA9 3013 aa13.39□□□□□ -0.27
CHFR-210ENST00000535527 LRRD1A4D1F6 860 aa13.38□□□□□ -0.27
CHFR-210ENST00000535527 H3BRJ5 948 aa13.38□□□□□ -0.27
CHFR-210ENST00000535527 CBX4O00257 560 aa13.38□□□□□ -0.27
CHFR-210ENST00000535527 FGF10O15520 208 aaPredicted RBP13.38□□□□□ -0.27
CHFR-210ENST00000535527 HRO43593 1189 aa13.38□□□□□ -0.27
CHFR-210ENST00000535527 SPOPO43791 374 aa13.38□□□□□ -0.27
CHFR-210ENST00000535527 ATP9BO43861 1147 aa13.38□□□□□ -0.27
CHFR-210ENST00000535527 GDF9O60383 454 aa13.38□□□□□ -0.27
CHFR-210ENST00000535527 RAMP2O60895 175 aa13.38□□□□□ -0.27
CHFR-210ENST00000535527 EPHX1P07099 455 aa13.38□□□□□ -0.27
CHFR-210ENST00000535527 CTSLP07711 333 aa13.38□□□□□ -0.27
CHFR-210ENST00000535527 BCKDHBP21953 392 aa13.38□□□□□ -0.27
CHFR-210ENST00000535527 RGRP47804 291 aa13.38□□□□□ -0.27
CHFR-210ENST00000535527 PEX5P50542 639 aa13.38□□□□□ -0.27
CHFR-210ENST00000535527 KRT83P78385 493 aa13.38□□□□□ -0.27
CHFR-210ENST00000535527 GBE1Q04446 702 aa13.38□□□□□ -0.27
CHFR-210ENST00000535527 SERINC3Q13530 473 aa13.38□□□□□ -0.27
CHFR-210ENST00000535527 SLC12A1Q13621 1099 aa13.38□□□□□ -0.27
CHFR-210ENST00000535527 HNRNPA1L2Q32P51 320 aaKnown RBP13.38□□□□□ -0.27
CHFR-210ENST00000535527 ANKRD20A8PQ5CZ79 823 aa13.38□□□□□ -0.27
CHFR-210ENST00000535527 C9orf64Q5T6V5 341 aa13.38□□□□□ -0.27
CHFR-210ENST00000535527 ACBD5Q5T8D3 534 aaPredicted RBP13.38□□□□□ -0.27
CHFR-210ENST00000535527 Q6ZVU0 165 aa13.38□□□□□ -0.27
CHFR-210ENST00000535527 DAAM2Q86T65 1068 aa13.38□□□□□ -0.27
CHFR-210ENST00000535527 FAM160A2Q8N612 972 aaPredicted RBP13.38□□□□□ -0.27
CHFR-210ENST00000535527 CHST14Q8NCH0 376 aa13.38□□□□□ -0.27
CHFR-210ENST00000535527 KCNV2Q8TDN2 545 aa13.38□□□□□ -0.27
CHFR-210ENST00000535527 MRGPRX1Q96LB2 322 aa13.38□□□□□ -0.27
CHFR-210ENST00000535527 ZNF670Q9BS34 389 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms