RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 GOLGA6L6A8MZA4 724 aa23.2■■□□□ 1.3
SFSWAP-204ENST00000535399 RHOBTB1O94844 696 aa23.2■■□□□ 1.3
SFSWAP-204ENST00000535399 CD48P09326 243 aa23.2■■□□□ 1.3
SFSWAP-204ENST00000535399 ACADMP11310 421 aa23.2■■□□□ 1.3
SFSWAP-204ENST00000535399 AMPD1P23109 780 aa23.2■■□□□ 1.3
SFSWAP-204ENST00000535399 IL4RP24394 825 aa23.2■■□□□ 1.3
SFSWAP-204ENST00000535399 GJC1P36383 396 aa23.2■■□□□ 1.3
SFSWAP-204ENST00000535399 CDH6P55285 790 aa23.2■■□□□ 1.3
SFSWAP-204ENST00000535399 SERINC3Q13530 473 aa23.2■■□□□ 1.3
SFSWAP-204ENST00000535399 ELF2Q15723 593 aa23.2■■□□□ 1.3
SFSWAP-204ENST00000535399 C22orf39Q6P5X5 142 aa23.2■■□□□ 1.3
SFSWAP-204ENST00000535399 SLC36A4Q6YBV0 504 aa23.2■■□□□ 1.3
SFSWAP-204ENST00000535399 MMAAQ8IVH4 418 aaKnown RBP23.2■■□□□ 1.3
SFSWAP-204ENST00000535399 ARHGAP12Q8IWW6 846 aa23.2■■□□□ 1.3
SFSWAP-204ENST00000535399 NPWQ8N729 165 aa23.2■■□□□ 1.3
SFSWAP-204ENST00000535399 ACRBPQ8NEB7 543 aa23.2■■□□□ 1.3
SFSWAP-204ENST00000535399 CELF6Q96J87 481 aaKnown RBP23.2■■□□□ 1.3
SFSWAP-204ENST00000535399 LOXL4Q96JB6 756 aa23.2■■□□□ 1.3
SFSWAP-204ENST00000535399 HPCAL4Q9UM19 191 aa23.2■■□□□ 1.3
SFSWAP-204ENST00000535399 MFHAS1Q9Y4C4 1052 aa23.2■■□□□ 1.3
SFSWAP-204ENST00000535399 SDK1Q7Z5N4 2213 aa23.2■■□□□ 1.3
SFSWAP-204ENST00000535399 RNASEH1O60930 286 aaKnown RBP23.19■■□□□ 1.3
SFSWAP-204ENST00000535399 ZNF821O75541 412 aaPredicted RBP23.19■■□□□ 1.3
SFSWAP-204ENST00000535399 IPO7O95373 1038 aaKnown RBP23.19■■□□□ 1.3
SFSWAP-204ENST00000535399 RETP07949 1114 aa23.19■■□□□ 1.3
SFSWAP-204ENST00000535399 KRT7P08729 469 aa23.19■■□□□ 1.3
SFSWAP-204ENST00000535399 NOP2P46087 812 aaKnown RBP23.19■■□□□ 1.3
SFSWAP-204ENST00000535399 GSDMDP57764 484 aa23.19■■□□□ 1.3
SFSWAP-204ENST00000535399 KRT81Q14533 505 aa23.19■■□□□ 1.3
SFSWAP-204ENST00000535399 CST6Q15828 149 aa23.19■■□□□ 1.3
SFSWAP-204ENST00000535399 OR2A12Q8NGT7 310 aa23.19■■□□□ 1.3
SFSWAP-204ENST00000535399 RUBCNQ92622 972 aa23.19■■□□□ 1.3
SFSWAP-204ENST00000535399 CEP44Q9C0F1 390 aa23.19■■□□□ 1.3
SFSWAP-204ENST00000535399 SLC39A8Q9C0K1 460 aa23.19■■□□□ 1.3
SFSWAP-204ENST00000535399 PABPC3Q9H361 631 aaKnown RBP23.19■■□□□ 1.3
SFSWAP-204ENST00000535399 GRPEL1Q9HAV7 217 aa23.19■■□□□ 1.3
SFSWAP-204ENST00000535399 ETNK2Q9NVF9 386 aa23.19■■□□□ 1.3
SFSWAP-204ENST00000535399 WSB2Q9NYS7 404 aaPredicted RBP23.19■■□□□ 1.3
SFSWAP-204ENST00000535399 RCOR3Q9P2K3 495 aaPredicted RBP23.19■■□□□ 1.3
SFSWAP-204ENST00000535399 FCF1Q9Y324 198 aaKnown RBP23.19■■□□□ 1.3
SFSWAP-204ENST00000535399 FAM186AA6NE01 2351 aa23.19■■□□□ 1.3
SFSWAP-204ENST00000535399 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa23.18■■□□□ 1.3
SFSWAP-204ENST00000535399 MCF2LO15068 1137 aa23.18■■□□□ 1.3
SFSWAP-204ENST00000535399 MAP3K13O43283 966 aa23.18■■□□□ 1.3
SFSWAP-204ENST00000535399 BUB1BO60566 1050 aaPredicted RBP23.18■■□□□ 1.3
SFSWAP-204ENST00000535399 DNTTP04053 509 aa23.18■■□□□ 1.3
SFSWAP-204ENST00000535399 CD6P30203 668 aa23.18■■□□□ 1.3
SFSWAP-204ENST00000535399 HOXD11P31277 338 aaPredicted RBP23.18■■□□□ 1.3
SFSWAP-204ENST00000535399 SLC1A1P43005 524 aa23.18■■□□□ 1.3
SFSWAP-204ENST00000535399 GEMIN4P57678 1058 aaKnown RBP23.18■■□□□ 1.3
SFSWAP-204ENST00000535399 MMRN1Q13201 1228 aa23.18■■□□□ 1.3
SFSWAP-204ENST00000535399 DPYSL3Q14195 570 aa23.18■■□□□ 1.3
SFSWAP-204ENST00000535399 LEKR1Q6ZMV7 388 aa23.18■■□□□ 1.3
SFSWAP-204ENST00000535399 LPCAT2Q7L5N7 544 aa23.18■■□□□ 1.3
SFSWAP-204ENST00000535399 ZNF354CQ86Y25 554 aa23.18■■□□□ 1.3
SFSWAP-204ENST00000535399 TMEFF1Q8IYR6 380 aa23.18■■□□□ 1.3
SFSWAP-204ENST00000535399 PCDH20Q8N6Y1 951 aaKnown RBP23.18■■□□□ 1.3
SFSWAP-204ENST00000535399 NETO2Q8NC67 525 aa23.18■■□□□ 1.3
SFSWAP-204ENST00000535399 OR8D1Q8WZ84 308 aa23.18■■□□□ 1.3
SFSWAP-204ENST00000535399 TOE1Q96GM8 510 aaKnown RBP23.18■■□□□ 1.3
SFSWAP-204ENST00000535399 TNKS2Q9H2K2 1166 aa23.18■■□□□ 1.3
SFSWAP-204ENST00000535399 KLHL11Q9NVR0 708 aa23.18■■□□□ 1.3
SFSWAP-204ENST00000535399 NCDNQ9UBB6 729 aa23.18■■□□□ 1.3
SFSWAP-204ENST00000535399 SALL4Q9UJQ4 1053 aa23.18■■□□□ 1.3
SFSWAP-204ENST00000535399 GMEB2Q9UKD1 530 aa23.18■■□□□ 1.3
SFSWAP-204ENST00000535399 HYOU1Q9Y4L1 999 aa23.18■■□□□ 1.3
SFSWAP-204ENST00000535399 CHD5Q8TDI0 1954 aa23.18■■□□□ 1.3
SFSWAP-204ENST00000535399 PTPRZ1P23471 2315 aaPredicted RBP23.17■■□□□ 1.3
SFSWAP-204ENST00000535399 ABCA7Q8IZY2 2146 aa23.17■■□□□ 1.3
SFSWAP-204ENST00000535399 GVINP1Q7Z2Y8 2422 aa23.17■■□□□ 1.3
SFSWAP-204ENST00000535399 ZSCAN5CA6NGD5 496 aaPredicted RBP23.17■■□□□ 1.3
SFSWAP-204ENST00000535399 ALOX15BO15296 676 aa23.17■■□□□ 1.3
SFSWAP-204ENST00000535399 MID1O15344 667 aa23.17■■□□□ 1.3
SFSWAP-204ENST00000535399 BUB1O43683 1085 aa23.17■■□□□ 1.3
SFSWAP-204ENST00000535399 EPN2O95208 641 aa23.17■■□□□ 1.3
SFSWAP-204ENST00000535399 OXTRP30559 389 aa23.17■■□□□ 1.3
SFSWAP-204ENST00000535399 PSMD8P48556 350 aa23.17■■□□□ 1.3
SFSWAP-204ENST00000535399 PAPOLAP51003 745 aaKnown RBP23.17■■□□□ 1.3
SFSWAP-204ENST00000535399 RPL6Q02878 288 aaKnown RBP23.17■■□□□ 1.3
SFSWAP-204ENST00000535399 PDK2Q15119 407 aa23.17■■□□□ 1.3
SFSWAP-204ENST00000535399 TP53INP2Q8IXH6 220 aa23.17■■□□□ 1.3
SFSWAP-204ENST00000535399 DCLK2Q8N568 766 aa23.17■■□□□ 1.3
SFSWAP-204ENST00000535399 LZTR1Q8N653 840 aa23.17■■□□□ 1.3
SFSWAP-204ENST00000535399 KCTD6Q8NC69 237 aa23.17■■□□□ 1.3
SFSWAP-204ENST00000535399 ISG20Q96AZ6 181 aaKnown RBP23.17■■□□□ 1.3
SFSWAP-204ENST00000535399 LACRTQ9GZZ8 138 aa23.17■■□□□ 1.3
SFSWAP-204ENST00000535399 PPM1HQ9ULR3 514 aa23.17■■□□□ 1.3
SFSWAP-204ENST00000535399 SCML1Q9UN30 329 aa23.17■■□□□ 1.3
SFSWAP-204ENST00000535399 GOLGA6L3A6NEY3 463 aa23.16■■□□□ 1.3
SFSWAP-204ENST00000535399 ARHGAP42A6NI28 874 aa23.16■■□□□ 1.3
SFSWAP-204ENST00000535399 BTNL10A8MVZ5 291 aa23.16■■□□□ 1.3
SFSWAP-204ENST00000535399 BNIP3LO60238 219 aa23.16■■□□□ 1.3
SFSWAP-204ENST00000535399 COMTP21964 271 aa23.16■■□□□ 1.3
SFSWAP-204ENST00000535399 SLC8A1P32418 973 aa23.16■■□□□ 1.3
SFSWAP-204ENST00000535399 VAV2P52735 878 aa23.16■■□□□ 1.3
SFSWAP-204ENST00000535399 TTC31Q49AM3 519 aaPredicted RBP23.16■■□□□ 1.3
SFSWAP-204ENST00000535399 SPDYCQ5MJ68 293 aa23.16■■□□□ 1.3
SFSWAP-204ENST00000535399 LRRC38Q5VT99 294 aa23.16■■□□□ 1.3
SFSWAP-204ENST00000535399 DSG4Q86SJ6 1040 aa23.16■■□□□ 1.3
SFSWAP-204ENST00000535399 CHST14Q8NCH0 376 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms