RNA–Protein interactions for RNA: ENST00000534636.5

CTSB-233, Transcript of cathepsin B, human

TSL 4

Gene CTSB, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-233	ENST00000534636	NT5C3B	Q969T7	300 aa		18.92	■□□□□ 0.62
CTSB-233	ENST00000534636	C1orf74	Q96LT6	269 aa		18.92	■□□□□ 0.62
CTSB-233	ENST00000534636	PCDHGA1	Q9Y5H4	931 aa		18.92	■□□□□ 0.62
CTSB-233	ENST00000534636	URB1	O60287	2271 aa	Known RBP	18.91	■□□□□ 0.62
CTSB-233	ENST00000534636		E9PAM4	449 aa		18.91	■□□□□ 0.62
CTSB-233	ENST00000534636	PRAMEF26	H0Y7S4	382 aa		18.91	■□□□□ 0.62
CTSB-233	ENST00000534636	SNAP91	O60641	907 aa		18.91	■□□□□ 0.62
CTSB-233	ENST00000534636	RFPL3	O75679	317 aa		18.91	■□□□□ 0.62
CTSB-233	ENST00000534636	PRNP	P04156	253 aa		18.91	■□□□□ 0.62
CTSB-233	ENST00000534636	EEF1G	P26641	437 aa	Known RBP	18.91	■□□□□ 0.62
CTSB-233	ENST00000534636	CHRNA3	P32297	505 aa		18.91	■□□□□ 0.62
CTSB-233	ENST00000534636	TCP11X2	Q5H9J9	407 aa		18.91	■□□□□ 0.62
CTSB-233	ENST00000534636	CT47A1	Q5JQC4	288 aa	Predicted RBP	18.91	■□□□□ 0.62
CTSB-233	ENST00000534636	TMPRSS12	Q86WS5	348 aa		18.91	■□□□□ 0.62
CTSB-233	ENST00000534636	EID2	Q8N6I1	236 aa		18.91	■□□□□ 0.62
CTSB-233	ENST00000534636	PPP1R16A	Q96I34	528 aa		18.91	■□□□□ 0.62
CTSB-233	ENST00000534636	ARHGAP20	Q9P2F6	1191 aa		18.91	■□□□□ 0.62
CTSB-233	ENST00000534636	SNX10	Q9Y5X0	201 aa		18.91	■□□□□ 0.62
CTSB-233	ENST00000534636	ADAMTS20	P59510	1910 aa		18.91	■□□□□ 0.62
CTSB-233	ENST00000534636	FAM170A	A1A519	330 aa		18.9	■□□□□ 0.62
CTSB-233	ENST00000534636	FAM149A	A5PLN7	773 aa		18.9	■□□□□ 0.62
CTSB-233	ENST00000534636		F8VZ95	297 aa		18.9	■□□□□ 0.62
CTSB-233	ENST00000534636	RNGTT	O60942	597 aa	Known RBP	18.9	■□□□□ 0.62
CTSB-233	ENST00000534636	SRGAP2	O75044	1071 aa		18.9	■□□□□ 0.62
CTSB-233	ENST00000534636	MT-CO1	P00395	513 aa		18.9	■□□□□ 0.62
CTSB-233	ENST00000534636	C1S	P09871	688 aa		18.9	■□□□□ 0.62
CTSB-233	ENST00000534636	RRM1	P23921	792 aa		18.9	■□□□□ 0.62
CTSB-233	ENST00000534636	RXRG	P48443	463 aa		18.9	■□□□□ 0.62
CTSB-233	ENST00000534636	KCNMA1	Q12791	1236 aa		18.9	■□□□□ 0.62
CTSB-233	ENST00000534636	SHB	Q15464	509 aa		18.9	■□□□□ 0.62
CTSB-233	ENST00000534636	C22orf39	Q6P5X5	142 aa		18.9	■□□□□ 0.62
CTSB-233	ENST00000534636	ZNF783	Q6ZMS7	281 aa		18.9	■□□□□ 0.62
CTSB-233	ENST00000534636	NOP9	Q86U38	636 aa	Known RBP	18.9	■□□□□ 0.62
CTSB-233	ENST00000534636	PDCD7	Q8N8D1	485 aa	Known RBP	18.9	■□□□□ 0.62
CTSB-233	ENST00000534636	TMIE	Q8NEW7	156 aa		18.9	■□□□□ 0.62
CTSB-233	ENST00000534636	HAPLN3	Q96S86	360 aa		18.9	■□□□□ 0.62
CTSB-233	ENST00000534636	PSMB7	Q99436	277 aa		18.9	■□□□□ 0.62
CTSB-233	ENST00000534636	STK33	Q9BYT3	514 aa		18.9	■□□□□ 0.62
CTSB-233	ENST00000534636	MPP6	Q9NZW5	540 aa		18.9	■□□□□ 0.62
CTSB-233	ENST00000534636	DKK4	Q9UBT3	224 aa		18.9	■□□□□ 0.62
CTSB-233	ENST00000534636	ARID1B	Q8NFD5	2236 aa	Predicted RBP	18.9	■□□□□ 0.62
CTSB-233	ENST00000534636	TRPM6	Q9BX84	2022 aa		18.9	■□□□□ 0.62
CTSB-233	ENST00000534636	IGLV3-10	A0A075B6K4	115 aa		18.89	■□□□□ 0.61
CTSB-233	ENST00000534636		A0A0D9SEW6	157 aa		18.89	■□□□□ 0.61
CTSB-233	ENST00000534636	DRGX	A6NNA5	263 aa		18.89	■□□□□ 0.61
CTSB-233	ENST00000534636	CBX4	O00257	560 aa		18.89	■□□□□ 0.61
CTSB-233	ENST00000534636	FLT3	P36888	993 aa		18.89	■□□□□ 0.61
CTSB-233	ENST00000534636	DNAJC3	Q13217	504 aa		18.89	■□□□□ 0.61
CTSB-233	ENST00000534636	HS1BP3	Q53T59	392 aa		18.89	■□□□□ 0.61
CTSB-233	ENST00000534636	PIP5KL1	Q5T9C9	394 aa		18.89	■□□□□ 0.61
CTSB-233	ENST00000534636	NAA35	Q5VZE5	725 aa		18.89	■□□□□ 0.61
CTSB-233	ENST00000534636	RETSAT	Q6NUM9	610 aa		18.89	■□□□□ 0.61
CTSB-233	ENST00000534636	DPY19L2P1	Q6NXN4	242 aa		18.89	■□□□□ 0.61
CTSB-233	ENST00000534636	NEK5	Q6P3R8	708 aa		18.89	■□□□□ 0.61
CTSB-233	ENST00000534636	LINGO4	Q6UY18	593 aa		18.89	■□□□□ 0.61
CTSB-233	ENST00000534636	FAM131B	Q86XD5	332 aa		18.89	■□□□□ 0.61
CTSB-233	ENST00000534636	ZNF677	Q86XU0	584 aa		18.89	■□□□□ 0.61
CTSB-233	ENST00000534636	ZNF683	Q8IZ20	524 aa		18.89	■□□□□ 0.61
CTSB-233	ENST00000534636	OR2A12	Q8NGT7	310 aa		18.89	■□□□□ 0.61
CTSB-233	ENST00000534636	GRIN3A	Q8TCU5	1115 aa		18.89	■□□□□ 0.61
CTSB-233	ENST00000534636	EPS8L1	Q8TE68	723 aa		18.89	■□□□□ 0.61
CTSB-233	ENST00000534636	CPA5	Q8WXQ8	436 aa		18.89	■□□□□ 0.61
CTSB-233	ENST00000534636	KLHDC7B	Q96G42	594 aa		18.89	■□□□□ 0.61
CTSB-233	ENST00000534636	CFAP57	Q96MR6	1250 aa		18.89	■□□□□ 0.61
CTSB-233	ENST00000534636	SPON2	Q9BUD6	331 aa		18.89	■□□□□ 0.61
CTSB-233	ENST00000534636	NAA15	Q9BXJ9	866 aa	Known RBP	18.89	■□□□□ 0.61
CTSB-233	ENST00000534636	ANLN	Q9NQW6	1124 aa		18.89	■□□□□ 0.61
CTSB-233	ENST00000534636	SAMSN1	Q9NSI8	373 aa	Known RBP	18.89	■□□□□ 0.61
CTSB-233	ENST00000534636	IL36A	Q9UHA7	158 aa		18.89	■□□□□ 0.61
CTSB-233	ENST00000534636	RAX	Q9Y2V3	346 aa		18.89	■□□□□ 0.61
CTSB-233	ENST00000534636	GPSM3	Q9Y4H4	160 aa		18.89	■□□□□ 0.61
CTSB-233	ENST00000534636	ILVBL	A1L0T0	632 aa		18.88	■□□□□ 0.61
CTSB-233	ENST00000534636	TRABD2B	A6NFA1	517 aa		18.88	■□□□□ 0.61
CTSB-233	ENST00000534636		K7ERQ8	282 aa		18.88	■□□□□ 0.61
CTSB-233	ENST00000534636	CTSL	P07711	333 aa		18.88	■□□□□ 0.61
CTSB-233	ENST00000534636	MME	P08473	750 aa		18.88	■□□□□ 0.61
CTSB-233	ENST00000534636	JUP	P14923	745 aa		18.88	■□□□□ 0.61
CTSB-233	ENST00000534636	AKT2	P31751	481 aa		18.88	■□□□□ 0.61
CTSB-233	ENST00000534636	NOMO3	P69849	1222 aa		18.88	■□□□□ 0.61
CTSB-233	ENST00000534636	ARL13B	Q3SXY8	428 aa		18.88	■□□□□ 0.61
CTSB-233	ENST00000534636	C2CD6	Q53TS8	623 aa		18.88	■□□□□ 0.61
CTSB-233	ENST00000534636	ARC	Q7LC44	396 aa		18.88	■□□□□ 0.61
CTSB-233	ENST00000534636	MARCH9	Q86YJ5	346 aa		18.88	■□□□□ 0.61
CTSB-233	ENST00000534636	ZYG11B	Q9C0D3	744 aa		18.88	■□□□□ 0.61
CTSB-233	ENST00000534636	ATP13A1	Q9HD20	1204 aa		18.88	■□□□□ 0.61
CTSB-233	ENST00000534636	METTL5	Q9NRN9	209 aa	Known RBP	18.88	■□□□□ 0.61
CTSB-233	ENST00000534636	TAB2	Q9NYJ8	693 aa		18.88	■□□□□ 0.61
CTSB-233	ENST00000534636	TDRD6	O60522	2096 aa	Known RBP	18.88	■□□□□ 0.61
CTSB-233	ENST00000534636		A0A1W2PQU0	124 aa		18.87	■□□□□ 0.61
CTSB-233	ENST00000534636		I6L893	689 aa	Predicted RBP	18.87	■□□□□ 0.61
CTSB-233	ENST00000534636	SLC31A1	O15431	190 aa		18.87	■□□□□ 0.61
CTSB-233	ENST00000534636	PCDH8	O95206	1070 aa		18.87	■□□□□ 0.61
CTSB-233	ENST00000534636	ETFB	P38117	255 aa		18.87	■□□□□ 0.61
CTSB-233	ENST00000534636	ACADVL	P49748	655 aa		18.87	■□□□□ 0.61
CTSB-233	ENST00000534636	TAS2R38	P59533	333 aa		18.87	■□□□□ 0.61
CTSB-233	ENST00000534636	ATP11A	P98196	1134 aa		18.87	■□□□□ 0.61
CTSB-233	ENST00000534636	CYP4F3	Q08477	520 aa		18.87	■□□□□ 0.61
CTSB-233	ENST00000534636	BNIP3	Q12983	259 aa		18.87	■□□□□ 0.61
CTSB-233	ENST00000534636	FKBP15	Q5T1M5	1219 aa		18.87	■□□□□ 0.61
CTSB-233	ENST00000534636	SFMBT2	Q5VUG0	894 aa		18.87	■□□□□ 0.61

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