RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 GRK3P35626 688 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 TNFSF9P41273 254 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 IL12RB1P42701 662 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 IFNAR2P48551 515 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 NLRP5P59047 1200 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 NUCB1Q02818 461 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 HHEXQ03014 270 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 YWHAHQ04917 246 aaPredicted RBP3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 MAP4K2Q12851 820 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 PPP2R5CQ13362 524 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 PDGFRLQ15198 375 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 PCBP1Q15365 356 aaKnown RBP eCLIP3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 NPY5RQ15761 445 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 IGFBP7Q16270 282 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 TAF12Q16514 161 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 DDR2Q16832 855 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 FAM187BQ17R55 369 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 CCDC142Q17RM4 750 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 RNF151Q2KHN1 245 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 KIF19Q2TAC6 998 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 SLC10A6Q3KNW5 377 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 WDR72Q3MJ13 1102 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 MGAT5BQ3V5L5 792 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 EARS2Q5JPH6 523 aaKnown RBP3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 SLC35F1Q5T1Q4 408 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 CDCA2Q69YH5 1023 aaPredicted RBP3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 ZNF280DQ6N043 979 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 RHBDF2Q6PJF5 856 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 DSTYKQ6XUX3 929 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 GATAD2AQ86YP4 633 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 GALNT15Q8N3T1 639 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 CPA6Q8N4T0 437 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 APPL2Q8NEU8 664 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 WDR48Q8TAF3 677 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 SH3RF2Q8TEC5 729 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 OSCP1Q8WVF1 389 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 FGF11Q92914 225 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 ZNF419Q96HQ0 510 aaPredicted RBP3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 SCYL1Q96KG9 808 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 UROC1Q96N76 676 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 DPYSL5Q9BPU6 564 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 EIF2AK1Q9BQI3 630 aaKnown RBP3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 PI4K2AQ9BTU6 479 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 TARS2Q9BW92 718 aaKnown RBP3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 SLC26A6Q9BXS9 759 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 TRIM55Q9BYV6 548 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 TRIM9Q9C026 710 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 LSG1Q9H089 658 aaKnown RBP3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 CCDC113Q9H0I3 377 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 CDT1Q9H211 546 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 CAAP1Q9H8G2 361 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 NCOA5Q9HCD5 579 aaKnown RBP3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 PTPRHQ9HD43 1115 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 SLC39A2Q9NP94 309 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 KCNMB3Q9NPA1 279 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 GJB4Q9NTQ9 266 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 PRMT7Q9NVM4 692 aaPredicted RBP3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 RBM28Q9NW13 759 aaKnown RBP3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 ARHGAP28Q9P2N2 729 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 DSEQ9UL01 958 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 KCNJ14Q9UNX9 436 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 ASB3Q9Y575 518 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 PAXBP1Q9Y5B6 917 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 NPFFR2Q9Y5X5 522 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 AHCTF1Q8WYP5 2266 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 NBASA2RRP1 2371 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 TBC1D3BA6NDS4 549 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 MYMKA6NI61 221 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 OR6C75A6NL08 312 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 LACTBL1A8MY62 500 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 KCNJ18B7U540 433 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 LEFTY2O00292 366 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 TNFSF14O43557 240 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 HCRTO43612 131 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 MARCH6O60337 910 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 CCNT1O60563 726 aaKnown RBP3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 NDUFS2O75306 463 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 IL18BPO95998 194 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 CYP17A1P05093 508 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 HAPLN1P10915 354 aaPredicted RBP3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 GP1BBP13224 206 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 KCNE1P15382 129 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 MAKP20794 623 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 CYP2F1P24903 491 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 CDC25CP30307 473 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 RPL9P32969 192 aaKnown RBP3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 RPS19P39019 145 aaKnown RBP3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 GRIA2P42262 883 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 CCR10P46092 362 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 RARRES1P49788 294 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 NANOS3P60323 173 aaKnown RBP3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 PPP2R2AP63151 447 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 CCT2P78371 535 aaKnown RBP3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 MRPS21P82921 87 aaKnown RBP3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 ATP2C1P98194 919 aaPredicted RBP3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 HDAC1Q13547 482 aaPredicted RBP3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 TUBA3CQ13748 450 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 NECTIN1Q15223 517 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 DHCR24Q15392 516 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 SAFBQ15424 915 aaKnown RBP eCLIP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms