RNA–Protein interactions for RNA: ENST00000533678.1

RDX-214, Transcript of radixin, humanhuman

TSL 4

Gene RDX, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-214ENST00000533678 DNASE2BQ8WZ79 361 aa16.78■□□□□ 0.28
RDX-214ENST00000533678 OR8D1Q8WZ84 308 aa16.78■□□□□ 0.28
RDX-214ENST00000533678 SPON2Q9BUD6 331 aa16.78■□□□□ 0.28
RDX-214ENST00000533678 NUSAP1Q9BXS6 441 aaKnown RBP16.78■□□□□ 0.28
RDX-214ENST00000533678 CEP44Q9C0F1 390 aa16.78■□□□□ 0.28
RDX-214ENST00000533678 ATP13A1Q9HD20 1204 aa16.78■□□□□ 0.28
RDX-214ENST00000533678 FZD4Q9ULV1 537 aa16.78■□□□□ 0.28
RDX-214ENST00000533678 HPCAL4Q9UM19 191 aa16.78■□□□□ 0.28
RDX-214ENST00000533678 NEU3Q9UQ49 428 aa16.78■□□□□ 0.28
RDX-214ENST00000533678 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.77■□□□□ 0.28
RDX-214ENST00000533678 CBX4O00257 560 aa16.77■□□□□ 0.28
RDX-214ENST00000533678 MCF2LO15068 1137 aa16.77■□□□□ 0.28
RDX-214ENST00000533678 PRPSAP2O60256 369 aa16.77■□□□□ 0.28
RDX-214ENST00000533678 SNAP91O60641 907 aa16.77■□□□□ 0.28
RDX-214ENST00000533678 RAMP2O60895 175 aa16.77■□□□□ 0.28
RDX-214ENST00000533678 GNSP15586 552 aa16.77■□□□□ 0.28
RDX-214ENST00000533678 ZNF252P-AS1Q0IIN9 211 aa16.77■□□□□ 0.28
RDX-214ENST00000533678 SEMA3BQ13214 749 aa16.77■□□□□ 0.28
RDX-214ENST00000533678 SLC18A3Q16572 532 aa16.77■□□□□ 0.28
RDX-214ENST00000533678 IL31Q6EBC2 164 aa16.77■□□□□ 0.28
RDX-214ENST00000533678 CACUL1Q86Y37 369 aa16.77■□□□□ 0.28
RDX-214ENST00000533678 RGL4Q8IZJ4 473 aa16.77■□□□□ 0.28
RDX-214ENST00000533678 RTL3Q8N8U3 475 aaKnown RBP16.77■□□□□ 0.28
RDX-214ENST00000533678 OR7D4Q8NG98 312 aa16.77■□□□□ 0.28
RDX-214ENST00000533678 GANCQ8TET4 914 aa16.77■□□□□ 0.28
RDX-214ENST00000533678 ARHGEF2Q92974 986 aaKnown RBP16.77■□□□□ 0.28
RDX-214ENST00000533678 OMDQ99983 421 aa16.77■□□□□ 0.28
RDX-214ENST00000533678 THAP2Q9H0W7 228 aa16.77■□□□□ 0.28
RDX-214ENST00000533678 TMEM74BQ9NUR3 256 aa16.77■□□□□ 0.28
RDX-214ENST00000533678 FBXL12Q9NXK8 326 aa16.77■□□□□ 0.28
RDX-214ENST00000533678 DNAI1Q9UI46 699 aa16.77■□□□□ 0.28
RDX-214ENST00000533678 SPTBN2O15020 2390 aa16.76■□□□□ 0.27
RDX-214ENST00000533678 MEI4A8MW99 385 aa16.76■□□□□ 0.27
RDX-214ENST00000533678 C1QTNF3-AMACRE9PGA6 284 aa16.76■□□□□ 0.27
RDX-214ENST00000533678 SLC30A4O14863 429 aa16.76■□□□□ 0.27
RDX-214ENST00000533678 MID1O15344 667 aa16.76■□□□□ 0.27
RDX-214ENST00000533678 CREB3O43889 395 aa16.76■□□□□ 0.27
RDX-214ENST00000533678 ZMPSTE24O75844 475 aa16.76■□□□□ 0.27
RDX-214ENST00000533678 IPO7O95373 1038 aaKnown RBP16.76■□□□□ 0.27
RDX-214ENST00000533678 SEMA4FO95754 770 aa16.76■□□□□ 0.27
RDX-214ENST00000533678 IL1BP01584 269 aa16.76■□□□□ 0.27
RDX-214ENST00000533678 CYP1A2P05177 515 aa16.76■□□□□ 0.27
RDX-214ENST00000533678 GOT1P17174 413 aa16.76■□□□□ 0.27
RDX-214ENST00000533678 MIPP30301 263 aa16.76■□□□□ 0.27
RDX-214ENST00000533678 EIF4A3P38919 411 aaKnown RBP16.76■□□□□ 0.27
RDX-214ENST00000533678 NUMBP49757 651 aa16.76■□□□□ 0.27
RDX-214ENST00000533678 YBEYP58557 167 aaPredicted RBP16.76■□□□□ 0.27
RDX-214ENST00000533678 TBX2Q13207 712 aaPredicted RBP16.76■□□□□ 0.27
RDX-214ENST00000533678 POLD3Q15054 466 aaPredicted RBP16.76■□□□□ 0.27
RDX-214ENST00000533678 TRIM61Q5EBN2 209 aa16.76■□□□□ 0.27
RDX-214ENST00000533678 DCAF12L1Q5VU92 463 aa16.76■□□□□ 0.27
RDX-214ENST00000533678 FAM124AQ86V42 546 aa16.76■□□□□ 0.27
RDX-214ENST00000533678 PYROXD2Q8N2H3 581 aa16.76■□□□□ 0.27
RDX-214ENST00000533678 ARFGAP1Q8N6T3 406 aa16.76■□□□□ 0.27
RDX-214ENST00000533678 NIPA2Q8N8Q9 360 aa16.76■□□□□ 0.27
RDX-214ENST00000533678 MAGEB5Q9BZ81 275 aa16.76■□□□□ 0.27
RDX-214ENST00000533678 IP6K2Q9UHH9 426 aa16.76■□□□□ 0.27
RDX-214ENST00000533678 LCMT1Q9UIC8 334 aa16.76■□□□□ 0.27
RDX-214ENST00000533678 PPM1HQ9ULR3 514 aa16.76■□□□□ 0.27
RDX-214ENST00000533678 TPX2Q9ULW0 747 aaKnown RBP16.76■□□□□ 0.27
RDX-214ENST00000533678 NENFQ9UMX5 172 aa16.76■□□□□ 0.27
RDX-214ENST00000533678 SLC6A14Q9UN76 642 aa16.76■□□□□ 0.27
RDX-214ENST00000533678 AP4E1Q9UPM8 1137 aa16.76■□□□□ 0.27
RDX-214ENST00000533678 MAP1BP46821 2468 aaKnown RBP16.75■□□□□ 0.27
RDX-214ENST00000533678 ZSCAN5CA6NGD5 496 aaPredicted RBP16.75■□□□□ 0.27
RDX-214ENST00000533678 SLC7A4O43246 635 aa16.75■□□□□ 0.27
RDX-214ENST00000533678 KDELR3O43731 214 aa16.75■□□□□ 0.27
RDX-214ENST00000533678 NRDCO43847 1150 aa16.75■□□□□ 0.27
RDX-214ENST00000533678 LRCH4O75427 683 aa16.75■□□□□ 0.27
RDX-214ENST00000533678 MT-CO1P00395 513 aa16.75■□□□□ 0.27
RDX-214ENST00000533678 SERPINF2P08697 491 aa16.75■□□□□ 0.27
RDX-214ENST00000533678 VAV1P15498 845 aa16.75■□□□□ 0.27
RDX-214ENST00000533678 ACSL1P33121 698 aa16.75■□□□□ 0.27
RDX-214ENST00000533678 RECQLP46063 649 aaPredicted RBP16.75■□□□□ 0.27
RDX-214ENST00000533678 PSMD8P48556 350 aa16.75■□□□□ 0.27
RDX-214ENST00000533678 SERPINH1P50454 418 aaKnown RBP16.75■□□□□ 0.27
RDX-214ENST00000533678 GALCP54803 685 aa16.75■□□□□ 0.27
RDX-214ENST00000533678 TPI1P60174 286 aa16.75■□□□□ 0.27
RDX-214ENST00000533678 ARF5P84085 180 aa16.75■□□□□ 0.27
RDX-214ENST00000533678 CCDC15Q0P6D6 951 aa16.75■□□□□ 0.27
RDX-214ENST00000533678 ASTE1Q2TB18 679 aaPredicted RBP16.75■□□□□ 0.27
RDX-214ENST00000533678 BOLA3Q53S33 107 aa16.75■□□□□ 0.27
RDX-214ENST00000533678 PPM1JQ5JR12 505 aa16.75■□□□□ 0.27
RDX-214ENST00000533678 PLPP6Q8IY26 295 aa16.75■□□□□ 0.27
RDX-214ENST00000533678 PCDH20Q8N6Y1 951 aaKnown RBP16.75■□□□□ 0.27
RDX-214ENST00000533678 TMIEQ8NEW7 156 aa16.75■□□□□ 0.27
RDX-214ENST00000533678 CASKIN2Q8WXE0 1202 aa16.75■□□□□ 0.27
RDX-214ENST00000533678 ISG20Q96AZ6 181 aaKnown RBP16.75■□□□□ 0.27
RDX-214ENST00000533678 NUP85Q9BW27 656 aa16.75■□□□□ 0.27
RDX-214ENST00000533678 TRIM7Q9C029 511 aa16.75■□□□□ 0.27
RDX-214ENST00000533678 KDM4CQ9H3R0 1056 aa16.75■□□□□ 0.27
RDX-214ENST00000533678 SMOC1Q9H4F8 434 aa16.75■□□□□ 0.27
RDX-214ENST00000533678 DHX35Q9H5Z1 703 aaKnown RBP16.75■□□□□ 0.27
RDX-214ENST00000533678 NHEJ1Q9H9Q4 299 aaPredicted RBP16.75■□□□□ 0.27
RDX-214ENST00000533678 LUC7LQ9NQ29 371 aaKnown RBP16.75■□□□□ 0.27
RDX-214ENST00000533678 NDFIP2Q9NV92 336 aa16.75■□□□□ 0.27
RDX-214ENST00000533678 PCSK1NQ9UHG2 260 aa16.75■□□□□ 0.27
RDX-214ENST00000533678 A0A1W2PP55 124 aa16.74■□□□□ 0.27
RDX-214ENST00000533678 LNP1A1A4G5 178 aa16.74■□□□□ 0.27
RDX-214ENST00000533678 LRRC72A6NJI9 287 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms