RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 IFT43Q96FT9 208 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 C9orf16Q9BUW7 83 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 TSPYL2Q9H2G4 693 aaPredicted RBP9.56□□□□□ -0.88
BDNF-216ENST00000532997 TRPC7Q9HCX4 862 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 C8orf4Q9NR00 106 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 UTP6Q9NYH9 597 aaKnown RBP9.56□□□□□ -0.88
BDNF-216ENST00000532997 SIX4Q9UIU6 781 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 SLC8A2Q9UPR5 921 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 ADAMTSL1Q8N6G6 1762 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 GPR25O00155 361 aa9.55□□□□□ -0.88
BDNF-216ENST00000532997 PFDN6O15212 129 aa9.55□□□□□ -0.88
BDNF-216ENST00000532997 DAB1O75553 588 aa9.55□□□□□ -0.88
BDNF-216ENST00000532997 STAU1O95793 577 aaKnown RBP9.55□□□□□ -0.88
BDNF-216ENST00000532997 FASP25445 335 aa9.55□□□□□ -0.88
BDNF-216ENST00000532997 DNAJB1P25685 340 aa9.55□□□□□ -0.88
BDNF-216ENST00000532997 MAP4P27816 1152 aaKnown RBP9.55□□□□□ -0.88
BDNF-216ENST00000532997 GRIA1P42261 906 aa9.55□□□□□ -0.88
BDNF-216ENST00000532997 MBTD1Q05BQ5 628 aa9.55□□□□□ -0.88
BDNF-216ENST00000532997 SFSWAPQ12872 951 aaKnown RBP9.55□□□□□ -0.88
BDNF-216ENST00000532997 SLC25A52Q3SY17 297 aa9.55□□□□□ -0.88
BDNF-216ENST00000532997 FBXO47Q5MNV8 452 aa9.55□□□□□ -0.88
BDNF-216ENST00000532997 C6orf52Q5T4I8 152 aa9.55□□□□□ -0.88
BDNF-216ENST00000532997 NOTUMQ6P988 496 aa9.55□□□□□ -0.88
BDNF-216ENST00000532997 LAYNQ6UX15 382 aa9.55□□□□□ -0.88
BDNF-216ENST00000532997 CYGBQ8WWM9 190 aa9.55□□□□□ -0.88
BDNF-216ENST00000532997 WNT8BQ93098 351 aa9.55□□□□□ -0.88
BDNF-216ENST00000532997 SGF29Q96ES7 293 aa9.55□□□□□ -0.88
BDNF-216ENST00000532997 APBA2Q99767 749 aa9.55□□□□□ -0.88
BDNF-216ENST00000532997 SPATC1LQ9H0A9 340 aa9.55□□□□□ -0.88
BDNF-216ENST00000532997 VPS45Q9NRW7 570 aa9.55□□□□□ -0.88
BDNF-216ENST00000532997 TAF1LQ8IZX4 1826 aa9.55□□□□□ -0.88
BDNF-216ENST00000532997 CCDC78A2IDD5 438 aa9.55□□□□□ -0.88
BDNF-216ENST00000532997 PHGDHO43175 533 aaKnown RBP9.55□□□□□ -0.88
BDNF-216ENST00000532997 USP12O75317 370 aa9.55□□□□□ -0.88
BDNF-216ENST00000532997 SEC24DO94855 1032 aaPredicted RBP9.55□□□□□ -0.88
BDNF-216ENST00000532997 SNRPB2P08579 225 aaKnown RBP9.55□□□□□ -0.88
BDNF-216ENST00000532997 INSRRP14616 1297 aa9.55□□□□□ -0.88
BDNF-216ENST00000532997 ALOX15P16050 662 aaPredicted RBP9.55□□□□□ -0.88
BDNF-216ENST00000532997 RAB15P59190 212 aa9.55□□□□□ -0.88
BDNF-216ENST00000532997 SP2Q02086 613 aa9.55□□□□□ -0.88
BDNF-216ENST00000532997 GRM2Q14416 872 aa9.55□□□□□ -0.88
BDNF-216ENST00000532997 ARL13AQ5H913 290 aaPredicted RBP9.55□□□□□ -0.88
BDNF-216ENST00000532997 TBCELQ5QJ74 424 aa9.55□□□□□ -0.88
BDNF-216ENST00000532997 ARHGAP17Q68EM7 881 aa9.55□□□□□ -0.88
BDNF-216ENST00000532997 PAF1Q8N7H5 531 aa9.55□□□□□ -0.88
BDNF-216ENST00000532997 MRPL57Q9BQC6 102 aaKnown RBP9.55□□□□□ -0.88
BDNF-216ENST00000532997 APOL2Q9BQE5 337 aa9.55□□□□□ -0.88
BDNF-216ENST00000532997 PRKD2Q9BZL6 878 aa9.55□□□□□ -0.88
BDNF-216ENST00000532997 UNC93B1Q9H1C4 597 aa9.55□□□□□ -0.88
BDNF-216ENST00000532997 OXSMQ9NWU1 459 aa9.55□□□□□ -0.88
BDNF-216ENST00000532997 C16orf96A6NNT2 1141 aa9.55□□□□□ -0.88
BDNF-216ENST00000532997 BCAS2O75934 225 aaPredicted RBP9.55□□□□□ -0.88
BDNF-216ENST00000532997 TOP3BO95985 862 aaKnown RBP9.55□□□□□ -0.88
BDNF-216ENST00000532997 JCHAINP01591 159 aa9.55□□□□□ -0.88
BDNF-216ENST00000532997 XRCC1P18887 633 aaPredicted RBP9.55□□□□□ -0.88
BDNF-216ENST00000532997 HPCAP84074 193 aa9.55□□□□□ -0.88
BDNF-216ENST00000532997 ADIGQ0VDE8 80 aa9.55□□□□□ -0.88
BDNF-216ENST00000532997 TRIM25Q14258 630 aaKnown RBP9.55□□□□□ -0.88
BDNF-216ENST00000532997 RFTN1Q14699 578 aaPredicted RBP9.55□□□□□ -0.88
BDNF-216ENST00000532997 NCBP2-AS2Q69YL0 99 aa9.55□□□□□ -0.88
BDNF-216ENST00000532997 ERI1Q8IV48 349 aaKnown RBP9.55□□□□□ -0.88
BDNF-216ENST00000532997 PCDH20Q8N6Y1 951 aaKnown RBP9.55□□□□□ -0.88
BDNF-216ENST00000532997 IPMKQ8NFU5 416 aa9.55□□□□□ -0.88
BDNF-216ENST00000532997 ZSCAN18Q8TBC5 510 aaPredicted RBP9.55□□□□□ -0.88
BDNF-216ENST00000532997 AKT1S1Q96B36 256 aa9.55□□□□□ -0.88
BDNF-216ENST00000532997 TCF12Q99081 682 aa9.55□□□□□ -0.88
BDNF-216ENST00000532997 FAM49AQ9H0Q0 323 aaPredicted RBP9.55□□□□□ -0.88
BDNF-216ENST00000532997 PHF24Q9UPV7 400 aa9.55□□□□□ -0.88
BDNF-216ENST00000532997 IGKV6D-21A0A0A0MT36 114 aa9.54□□□□□ -0.88
BDNF-216ENST00000532997 FAM95CA0A1B0GW59 222 aa9.54□□□□□ -0.88
BDNF-216ENST00000532997 BTBD19C9JJ37 291 aa9.54□□□□□ -0.88
BDNF-216ENST00000532997 H0YJX3 145 aa9.54□□□□□ -0.88
BDNF-216ENST00000532997 CBFA2T3O75081 653 aa9.54□□□□□ -0.88
BDNF-216ENST00000532997 CAPN15O75808 1086 aa9.54□□□□□ -0.88
BDNF-216ENST00000532997 GRM5P41594 1212 aa9.54□□□□□ -0.88
BDNF-216ENST00000532997 GMPSP49915 693 aaPredicted RBP9.54□□□□□ -0.88
BDNF-216ENST00000532997 PSMD7P51665 324 aa9.54□□□□□ -0.88
BDNF-216ENST00000532997 RAB10P61026 200 aa9.54□□□□□ -0.88
BDNF-216ENST00000532997 FRG1Q14331 258 aaKnown RBP9.54□□□□□ -0.88
BDNF-216ENST00000532997 C16orf72Q14CZ0 275 aa9.54□□□□□ -0.88
BDNF-216ENST00000532997 PSMD5Q16401 504 aa9.54□□□□□ -0.88
BDNF-216ENST00000532997 PCID2Q5JVF3 399 aa9.54□□□□□ -0.88
BDNF-216ENST00000532997 UGT2A3Q6UWM9 527 aa9.54□□□□□ -0.88
BDNF-216ENST00000532997 ZNF554Q86TJ5 538 aa9.54□□□□□ -0.88
BDNF-216ENST00000532997 ALDH16A1Q8IZ83 802 aa9.54□□□□□ -0.88
BDNF-216ENST00000532997 ZNF567Q8N184 647 aa9.54□□□□□ -0.88
BDNF-216ENST00000532997 HM13Q8TCT9 377 aa9.54□□□□□ -0.88
BDNF-216ENST00000532997 OR52B2Q96RD2 323 aa9.54□□□□□ -0.88
BDNF-216ENST00000532997 GPR20Q99678 358 aa9.54□□□□□ -0.88
BDNF-216ENST00000532997 SEMA6AQ9H2E6 1030 aa9.54□□□□□ -0.88
BDNF-216ENST00000532997 DDIT4Q9NX09 232 aa9.54□□□□□ -0.88
BDNF-216ENST00000532997 XPR1Q9UBH6 696 aa9.54□□□□□ -0.88
BDNF-216ENST00000532997 DFFAO00273 331 aa9.54□□□□□ -0.88
BDNF-216ENST00000532997 MATN2O00339 956 aa9.54□□□□□ -0.88
BDNF-216ENST00000532997 AP1G1O43747 822 aa9.54□□□□□ -0.88
BDNF-216ENST00000532997 NPHS1O60500 1241 aa9.54□□□□□ -0.88
BDNF-216ENST00000532997 DNAJA2O60884 412 aa9.54□□□□□ -0.88
BDNF-216ENST00000532997 H6PDO95479 791 aa9.54□□□□□ -0.88
BDNF-216ENST00000532997 TRAP1Q12931 704 aaKnown RBP9.54□□□□□ -0.88
BDNF-216ENST00000532997 TLR1Q15399 786 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms