RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 RTKNQ9BST9 563 aa15.72■□□□□ 0.11
CPSF1-210ENST00000532935 ACE2Q9BYF1 805 aaPredicted RBP15.72■□□□□ 0.11
CPSF1-210ENST00000532935 THAP2Q9H0W7 228 aa15.72■□□□□ 0.11
CPSF1-210ENST00000532935 C6orf106Q9H6K1 298 aaPredicted RBP15.72■□□□□ 0.11
CPSF1-210ENST00000532935 SERGEFQ9UGK8 458 aa15.72■□□□□ 0.11
CPSF1-210ENST00000532935 AP4E1Q9UPM8 1137 aa15.72■□□□□ 0.11
CPSF1-210ENST00000532935 ASCC3Q8N3C0 2202 aaKnown RBP15.71■□□□□ 0.11
CPSF1-210ENST00000532935 DOCK9Q9BZ29 2069 aa15.71■□□□□ 0.11
CPSF1-210ENST00000532935 MCF2LO15068 1137 aa15.71■□□□□ 0.11
CPSF1-210ENST00000532935 ALOX15BO15296 676 aa15.71■□□□□ 0.11
CPSF1-210ENST00000532935 BNIP3LO60238 219 aa15.71■□□□□ 0.11
CPSF1-210ENST00000532935 RAMP2O60895 175 aa15.71■□□□□ 0.11
CPSF1-210ENST00000532935 RNASEH2AO75792 299 aaKnown RBP15.71■□□□□ 0.11
CPSF1-210ENST00000532935 SERPINF2P08697 491 aa15.71■□□□□ 0.11
CPSF1-210ENST00000532935 TPM1P09493 284 aa15.71■□□□□ 0.11
CPSF1-210ENST00000532935 MIPP30301 263 aa15.71■□□□□ 0.11
CPSF1-210ENST00000532935 ACVRL1P37023 503 aa15.71■□□□□ 0.11
CPSF1-210ENST00000532935 EIF4A3P38919 411 aaKnown RBP15.71■□□□□ 0.11
CPSF1-210ENST00000532935 SERPINH1P50454 418 aaKnown RBP15.71■□□□□ 0.11
CPSF1-210ENST00000532935 ARF5P84085 180 aa15.71■□□□□ 0.11
CPSF1-210ENST00000532935 CCDC122Q5T0U0 273 aa15.71■□□□□ 0.11
CPSF1-210ENST00000532935 HDDC3Q8N4P3 179 aa15.71■□□□□ 0.11
CPSF1-210ENST00000532935 AADATQ8N5Z0 425 aa15.71■□□□□ 0.11
CPSF1-210ENST00000532935 PEBP4Q96S96 227 aa15.71■□□□□ 0.11
CPSF1-210ENST00000532935 OMDQ99983 421 aa15.71■□□□□ 0.11
CPSF1-210ENST00000532935 MAGEH1Q9H213 219 aa15.71■□□□□ 0.11
CPSF1-210ENST00000532935 NEUROG2Q9H2A3 272 aa15.71■□□□□ 0.11
CPSF1-210ENST00000532935 GPATCH2LQ9NWQ4 482 aa15.71■□□□□ 0.11
CPSF1-210ENST00000532935 SUSD2Q9UGT4 822 aa15.71■□□□□ 0.11
CPSF1-210ENST00000532935 PCSK1NQ9UHG2 260 aa15.71■□□□□ 0.11
CPSF1-210ENST00000532935 FZD4Q9ULV1 537 aa15.71■□□□□ 0.11
CPSF1-210ENST00000532935 NENFQ9UMX5 172 aa15.71■□□□□ 0.11
CPSF1-210ENST00000532935 SLC6A14Q9UN76 642 aa15.71■□□□□ 0.11
CPSF1-210ENST00000532935 GOLGA6L3A6NEY3 463 aa15.7■□□□□ 0.1
CPSF1-210ENST00000532935 WASH4PA8MWX3 477 aa15.7■□□□□ 0.1
CPSF1-210ENST00000532935 PRPSAP2O60256 369 aa15.7■□□□□ 0.1
CPSF1-210ENST00000532935 LRCH4O75427 683 aa15.7■□□□□ 0.1
CPSF1-210ENST00000532935 GNSP15586 552 aa15.7■□□□□ 0.1
CPSF1-210ENST00000532935 GOT1P17174 413 aa15.7■□□□□ 0.1
CPSF1-210ENST00000532935 ENGP17813 658 aa15.7■□□□□ 0.1
CPSF1-210ENST00000532935 HTR7P34969 479 aa15.7■□□□□ 0.1
CPSF1-210ENST00000532935 SLC20A2Q08357 652 aa15.7■□□□□ 0.1
CPSF1-210ENST00000532935 POLD3Q15054 466 aaPredicted RBP15.7■□□□□ 0.1
CPSF1-210ENST00000532935 ERMARDQ5T6L9 678 aa15.7■□□□□ 0.1
CPSF1-210ENST00000532935 C22orf39Q6P5X5 142 aa15.7■□□□□ 0.1
CPSF1-210ENST00000532935 SARM1Q6SZW1 724 aa15.7■□□□□ 0.1
CPSF1-210ENST00000532935 CYP4V2Q6ZWL3 525 aaPredicted RBP15.7■□□□□ 0.1
CPSF1-210ENST00000532935 DGLUCYQ7Z3D6 616 aa15.7■□□□□ 0.1
CPSF1-210ENST00000532935 OR2A12Q8NGT7 310 aa15.7■□□□□ 0.1
CPSF1-210ENST00000532935 CCDC114Q96M63 670 aa15.7■□□□□ 0.1
CPSF1-210ENST00000532935 NCAPGQ9BPX3 1015 aa15.7■□□□□ 0.1
CPSF1-210ENST00000532935 SNRNP25Q9BV90 132 aaKnown RBP15.7■□□□□ 0.1
CPSF1-210ENST00000532935 CEP44Q9C0F1 390 aa15.7■□□□□ 0.1
CPSF1-210ENST00000532935 MIR1-1HGQ9H1L0 117 aa15.7■□□□□ 0.1
CPSF1-210ENST00000532935 DHX35Q9H5Z1 703 aaKnown RBP15.7■□□□□ 0.1
CPSF1-210ENST00000532935 CATSPERBQ9H7T0 1116 aa15.7■□□□□ 0.1
CPSF1-210ENST00000532935 CAPN10Q9HC96 672 aa15.7■□□□□ 0.1
CPSF1-210ENST00000532935 TMEM9BQ9NQ34 198 aa15.7■□□□□ 0.1
CPSF1-210ENST00000532935 FSCN3Q9NQT6 498 aa15.7■□□□□ 0.1
CPSF1-210ENST00000532935 ZNHIT6Q9NWK9 470 aaKnown RBP15.7■□□□□ 0.1
CPSF1-210ENST00000532935 EIF2B4Q9UI10 523 aaKnown RBP15.7■□□□□ 0.1
CPSF1-210ENST00000532935 SARDHQ9UL12 918 aa15.7■□□□□ 0.1
CPSF1-210ENST00000532935 PPM1HQ9ULR3 514 aa15.7■□□□□ 0.1
CPSF1-210ENST00000532935 FARP1Q9Y4F1 1045 aaPredicted RBP15.7■□□□□ 0.1
CPSF1-210ENST00000532935 CNOT1A5YKK6 2376 aaKnown RBP15.7■□□□□ 0.1
CPSF1-210ENST00000532935 TMEM131Q92545 1883 aa15.69■□□□□ 0.1
CPSF1-210ENST00000532935 CXorf51AA0A1B0GTR3 108 aa15.69■□□□□ 0.1
CPSF1-210ENST00000532935 DCDC2BA2VCK2 349 aa15.69■□□□□ 0.1
CPSF1-210ENST00000532935 EIF3CLB5ME19 914 aaKnown RBP15.69■□□□□ 0.1
CPSF1-210ENST00000532935 C1QTNF3-AMACRE9PGA6 284 aa15.69■□□□□ 0.1
CPSF1-210ENST00000532935 FGF10O15520 208 aaPredicted RBP15.69■□□□□ 0.1
CPSF1-210ENST00000532935 CD160O95971 181 aa15.69■□□□□ 0.1
CPSF1-210ENST00000532935 CYP1A2P05177 515 aa15.69■□□□□ 0.1
CPSF1-210ENST00000532935 DRD3P35462 400 aa15.69■□□□□ 0.1
CPSF1-210ENST00000532935 PCK1P35558 622 aa15.69■□□□□ 0.1
CPSF1-210ENST00000532935 METAP1P53582 386 aa15.69■□□□□ 0.1
CPSF1-210ENST00000532935 GALCP54803 685 aa15.69■□□□□ 0.1
CPSF1-210ENST00000532935 ADKP55263 362 aaKnown RBP15.69■□□□□ 0.1
CPSF1-210ENST00000532935 TPI1P60174 286 aa15.69■□□□□ 0.1
CPSF1-210ENST00000532935 GFPT1Q06210 699 aaPredicted RBP15.69■□□□□ 0.1
CPSF1-210ENST00000532935 ACAP1Q15027 740 aa15.69■□□□□ 0.1
CPSF1-210ENST00000532935 SLC18A3Q16572 532 aa15.69■□□□□ 0.1
CPSF1-210ENST00000532935 CA9Q16790 459 aa15.69■□□□□ 0.1
CPSF1-210ENST00000532935 TSR1Q2NL82 804 aaKnown RBP15.69■□□□□ 0.1
CPSF1-210ENST00000532935 FAM46CQ5VWP2 391 aa15.69■□□□□ 0.1
CPSF1-210ENST00000532935 DAB2IPQ5VWQ8 1189 aa15.69■□□□□ 0.1
CPSF1-210ENST00000532935 PSTKQ8IV42 348 aaKnown RBP15.69■□□□□ 0.1
CPSF1-210ENST00000532935 ZCCHC9Q8N567 271 aaKnown RBP15.69■□□□□ 0.1
CPSF1-210ENST00000532935 PIP4K2CQ8TBX8 421 aa15.69■□□□□ 0.1
CPSF1-210ENST00000532935 SNX19Q92543 992 aa15.69■□□□□ 0.1
CPSF1-210ENST00000532935 ARHGEF26Q96DR7 871 aa15.69■□□□□ 0.1
CPSF1-210ENST00000532935 KCTD15Q96SI1 283 aaPredicted RBP15.69■□□□□ 0.1
CPSF1-210ENST00000532935 EIF3CQ99613 913 aaKnown RBP15.69■□□□□ 0.1
CPSF1-210ENST00000532935 NUP85Q9BW27 656 aa15.69■□□□□ 0.1
CPSF1-210ENST00000532935 TNKS2Q9H2K2 1166 aa15.69■□□□□ 0.1
CPSF1-210ENST00000532935 NOL6Q9H6R4 1146 aaKnown RBP15.69■□□□□ 0.1
CPSF1-210ENST00000532935 ABHD10Q9NUJ1 306 aa15.69■□□□□ 0.1
CPSF1-210ENST00000532935 HPCAL4Q9UM19 191 aa15.69■□□□□ 0.1
CPSF1-210ENST00000532935 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.69■□□□□ 0.1
CPSF1-210ENST00000532935 ACTL7AQ9Y615 435 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms