RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 UNQ6494/PRO21346Q6UXR6 183 aa19.41■□□□□ 0.7
SSH3-209ENST00000532600 RAB44Q7Z6P3 723 aaPredicted RBP19.41■□□□□ 0.7
SSH3-209ENST00000532600 CHCHD4Q8N4Q1 142 aa19.41■□□□□ 0.7
SSH3-209ENST00000532600 MSANTD4Q8NCY6 345 aa19.41■□□□□ 0.7
SSH3-209ENST00000532600 OR7D4Q8NG98 312 aa19.41■□□□□ 0.7
SSH3-209ENST00000532600 OR8D1Q8WZ84 308 aa19.41■□□□□ 0.7
SSH3-209ENST00000532600 ARHGAP20Q9P2F6 1191 aa19.41■□□□□ 0.7
SSH3-209ENST00000532600 DAAM1Q9Y4D1 1078 aa19.41■□□□□ 0.7
SSH3-209ENST00000532600 PCDHGB2Q9Y5G2 931 aa19.41■□□□□ 0.7
SSH3-209ENST00000532600 TCRBV5S1A1TA0A578 114 aa19.4■□□□□ 0.7
SSH3-209ENST00000532600 VILLO15195 856 aa19.4■□□□□ 0.7
SSH3-209ENST00000532600 LATO43561 262 aa19.4■□□□□ 0.7
SSH3-209ENST00000532600 SRGAP2O75044 1071 aa19.4■□□□□ 0.7
SSH3-209ENST00000532600 ZNF821O75541 412 aaPredicted RBP19.4■□□□□ 0.7
SSH3-209ENST00000532600 ZMPSTE24O75844 475 aa19.4■□□□□ 0.7
SSH3-209ENST00000532600 PROS1P07225 676 aa19.4■□□□□ 0.7
SSH3-209ENST00000532600 FTH1P19P0C7X4 201 aa19.4■□□□□ 0.7
SSH3-209ENST00000532600 CNTN1Q12860 1018 aa19.4■□□□□ 0.7
SSH3-209ENST00000532600 SFSWAPQ12872 951 aaKnown RBP19.4■□□□□ 0.7
SSH3-209ENST00000532600 HNRNPDQ14103 355 aaKnown RBP19.4■□□□□ 0.7
SSH3-209ENST00000532600 TEAD4Q15561 434 aa19.4■□□□□ 0.7
SSH3-209ENST00000532600 CLEC16AQ2KHT3 1053 aa19.4■□□□□ 0.7
SSH3-209ENST00000532600 ZNF423Q2M1K9 1284 aa19.4■□□□□ 0.7
SSH3-209ENST00000532600 MANEALQ5VSG8 457 aa19.4■□□□□ 0.7
SSH3-209ENST00000532600 LRRC31Q6UY01 552 aa19.4■□□□□ 0.7
SSH3-209ENST00000532600 LINGO4Q6UY18 593 aa19.4■□□□□ 0.7
SSH3-209ENST00000532600 GLRX5Q86SX6 157 aa19.4■□□□□ 0.7
SSH3-209ENST00000532600 SLCO6A1Q86UG4 719 aa19.4■□□□□ 0.7
SSH3-209ENST00000532600 PNPLA1Q8N8W4 532 aa19.4■□□□□ 0.7
SSH3-209ENST00000532600 DCAF4L2Q8NA75 395 aa19.4■□□□□ 0.7
SSH3-209ENST00000532600 OR2A12Q8NGT7 310 aa19.4■□□□□ 0.7
SSH3-209ENST00000532600 PIP4K2CQ8TBX8 421 aa19.4■□□□□ 0.7
SSH3-209ENST00000532600 CENPIQ92674 756 aaPredicted RBP19.4■□□□□ 0.7
SSH3-209ENST00000532600 PPP1R9BQ96SB3 815 aa19.4■□□□□ 0.7
SSH3-209ENST00000532600 TOR4AQ9NXH8 423 aa19.4■□□□□ 0.7
SSH3-209ENST00000532600 PAXBP1Q9Y5B6 917 aa19.4■□□□□ 0.7
SSH3-209ENST00000532600 CHD5Q8TDI0 1954 aa19.39■□□□□ 0.7
SSH3-209ENST00000532600 FAM72CH0Y354 149 aa19.39■□□□□ 0.69
SSH3-209ENST00000532600 ALOX15BO15296 676 aa19.39■□□□□ 0.69
SSH3-209ENST00000532600 PLRG1O43660 514 aaKnown RBP19.39■□□□□ 0.69
SSH3-209ENST00000532600 CD160O95971 181 aa19.39■□□□□ 0.69
SSH3-209ENST00000532600 GSCP56915 257 aaPredicted RBP19.39■□□□□ 0.69
SSH3-209ENST00000532600 TAS2R38P59533 333 aa19.39■□□□□ 0.69
SSH3-209ENST00000532600 SHBQ15464 509 aa19.39■□□□□ 0.69
SSH3-209ENST00000532600 CDO1Q16878 200 aa19.39■□□□□ 0.69
SSH3-209ENST00000532600 PRAMEF14Q5SWL7 426 aa19.39■□□□□ 0.69
SSH3-209ENST00000532600 FAM72AQ5TYM5 149 aa19.39■□□□□ 0.69
SSH3-209ENST00000532600 FAM72DQ6L9T8 149 aa19.39■□□□□ 0.69
SSH3-209ENST00000532600 TRIM72Q6ZMU5 477 aa19.39■□□□□ 0.69
SSH3-209ENST00000532600 FAM72BQ86X60 149 aa19.39■□□□□ 0.69
SSH3-209ENST00000532600 PHF13Q86YI8 300 aaPredicted RBP19.39■□□□□ 0.69
SSH3-209ENST00000532600 CCDC185Q8N715 623 aa19.39■□□□□ 0.69
SSH3-209ENST00000532600 CHST14Q8NCH0 376 aa19.39■□□□□ 0.69
SSH3-209ENST00000532600 SETD7Q8WTS6 366 aaKnown RBP19.39■□□□□ 0.69
SSH3-209ENST00000532600 ANP32EQ9BTT0 268 aa19.39■□□□□ 0.69
SSH3-209ENST00000532600 C2orf49Q9BVC5 232 aaPredicted RBP19.39■□□□□ 0.69
SSH3-209ENST00000532600 NDFIP2Q9NV92 336 aa19.39■□□□□ 0.69
SSH3-209ENST00000532600 NEUROG3Q9Y4Z2 214 aa19.39■□□□□ 0.69
SSH3-209ENST00000532600 ACTL7AQ9Y615 435 aa19.39■□□□□ 0.69
SSH3-209ENST00000532600 WDFY3Q8IZQ1 3526 aa19.38■□□□□ 0.69
SSH3-209ENST00000532600 ILVBLA1L0T0 632 aa19.38■□□□□ 0.69
SSH3-209ENST00000532600 FAM221BA6H8Z2 402 aa19.38■□□□□ 0.69
SSH3-209ENST00000532600 ZZEF1O43149 2961 aa19.38■□□□□ 0.69
SSH3-209ENST00000532600 CBFA2T2O43439 604 aa19.38■□□□□ 0.69
SSH3-209ENST00000532600 BNIP3LO60238 219 aa19.38■□□□□ 0.69
SSH3-209ENST00000532600 GYPCP04921 128 aa19.38■□□□□ 0.69
SSH3-209ENST00000532600 OR1E1P30953 314 aa19.38■□□□□ 0.69
SSH3-209ENST00000532600 RFC1P35251 1148 aaPredicted RBP19.38■□□□□ 0.69
SSH3-209ENST00000532600 ADRA1BP35368 520 aa19.38■□□□□ 0.69
SSH3-209ENST00000532600 PTPN9P43378 593 aa19.38■□□□□ 0.69
SSH3-209ENST00000532600 HDAC4P56524 1084 aa19.38■□□□□ 0.69
SSH3-209ENST00000532600 ARF5P84085 180 aa19.38■□□□□ 0.69
SSH3-209ENST00000532600 IL9RQ01113 521 aa19.38■□□□□ 0.69
SSH3-209ENST00000532600 NRG1Q02297 640 aaPredicted RBP19.38■□□□□ 0.69
SSH3-209ENST00000532600 FIGNQ5HY92 759 aa19.38■□□□□ 0.69
SSH3-209ENST00000532600 C6orf118Q5T5N4 469 aa19.38■□□□□ 0.69
SSH3-209ENST00000532600 PIP5KL1Q5T9C9 394 aa19.38■□□□□ 0.69
SSH3-209ENST00000532600 MON1BQ7L1V2 547 aa19.38■□□□□ 0.69
SSH3-209ENST00000532600 ZFHX4Q86UP3 3567 aa19.38■□□□□ 0.69
SSH3-209ENST00000532600 VSTM4Q8IW00 320 aa19.38■□□□□ 0.69
SSH3-209ENST00000532600 ATP11CQ8NB49 1132 aa19.38■□□□□ 0.69
SSH3-209ENST00000532600 ARRDC3Q96B67 414 aa19.38■□□□□ 0.69
SSH3-209ENST00000532600 ZYG11BQ9C0D3 744 aa19.38■□□□□ 0.69
SSH3-209ENST00000532600 TMEM51Q9NW97 253 aa19.38■□□□□ 0.69
SSH3-209ENST00000532600 PPARGC1AQ9UBK2 798 aaKnown RBP19.38■□□□□ 0.69
SSH3-209ENST00000532600 TBC1D3DA0A087WVF3 549 aa19.37■□□□□ 0.69
SSH3-209ENST00000532600 TBC1D3IA0A087WXS9 549 aa19.37■□□□□ 0.69
SSH3-209ENST00000532600 TBC1D3EA0A087X179 549 aa19.37■□□□□ 0.69
SSH3-209ENST00000532600 TBC1D3KA0A087X1G2 549 aa19.37■□□□□ 0.69
SSH3-209ENST00000532600 TBC1D3FA6NER0 549 aaPredicted RBP19.37■□□□□ 0.69
SSH3-209ENST00000532600 LRRC53A6NM62 1247 aa19.37■□□□□ 0.69
SSH3-209ENST00000532600 TBC1D3LB9A6J9 549 aa19.37■□□□□ 0.69
SSH3-209ENST00000532600 SLC7A4O43246 635 aa19.37■□□□□ 0.69
SSH3-209ENST00000532600 TBC1D3HP0C7X1 549 aa19.37■□□□□ 0.69
SSH3-209ENST00000532600 SDC4P31431 198 aa19.37■□□□□ 0.69
SSH3-209ENST00000532600 NSFP46459 744 aaKnown RBP19.37■□□□□ 0.69
SSH3-209ENST00000532600 KRT83P78385 493 aa19.37■□□□□ 0.69
SSH3-209ENST00000532600 ACBD5Q5T8D3 534 aaPredicted RBP19.37■□□□□ 0.69
SSH3-209ENST00000532600 TBC1D3GQ6DHY5 549 aa19.37■□□□□ 0.69
SSH3-209ENST00000532600 TBC1D3CQ6IPX1 549 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms