RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 MUC13Q9H3R2 512 aa4.76□□□□□ -1.65
USP47-211ENST00000531513 DUSP22Q9NRW4 184 aa4.76□□□□□ -1.65
USP47-211ENST00000531513 HCN3Q9P1Z3 774 aa4.76□□□□□ -1.65
USP47-211ENST00000531513 NFKBIL1Q9UBC1 381 aaPredicted RBP4.76□□□□□ -1.65
USP47-211ENST00000531513 LYVE1Q9Y5Y7 322 aa4.76□□□□□ -1.65
USP47-211ENST00000531513 PASKQ96RG2 1323 aa4.75□□□□□ -1.65
USP47-211ENST00000531513 CNTNAP2Q9UHC6 1331 aa4.75□□□□□ -1.65
USP47-211ENST00000531513 NPIPB15A6NHN6 443 aaPredicted RBP4.75□□□□□ -1.65
USP47-211ENST00000531513 TEX22C9J3V5 150 aa4.75□□□□□ -1.65
USP47-211ENST00000531513 TMEM232C9JQI7 657 aa4.75□□□□□ -1.65
USP47-211ENST00000531513 PTGES3LE9PB15 166 aa4.75□□□□□ -1.65
USP47-211ENST00000531513 INSIG1O15503 277 aa4.75□□□□□ -1.65
USP47-211ENST00000531513 TNFSF14O43557 240 aa4.75□□□□□ -1.65
USP47-211ENST00000531513 CA12O43570 354 aa4.75□□□□□ -1.65
USP47-211ENST00000531513 TSPAN9O75954 239 aa4.75□□□□□ -1.65
USP47-211ENST00000531513 TJP3O95049 919 aa4.75□□□□□ -1.65
USP47-211ENST00000531513 CCNDBP1O95273 360 aa4.75□□□□□ -1.65
USP47-211ENST00000531513 FESP07332 822 aa4.75□□□□□ -1.65
USP47-211ENST00000531513 ENGP17813 658 aa4.75□□□□□ -1.65
USP47-211ENST00000531513 TKTP29401 623 aaKnown RBP4.75□□□□□ -1.65
USP47-211ENST00000531513 IGHMBP2P38935 993 aaKnown RBP4.75□□□□□ -1.65
USP47-211ENST00000531513 ARL1P40616 181 aaPredicted RBP4.75□□□□□ -1.65
USP47-211ENST00000531513 TERF1P54274 439 aa4.75□□□□□ -1.65
USP47-211ENST00000531513 DEUP1Q05D60 604 aa4.75□□□□□ -1.65
USP47-211ENST00000531513 CDK18Q07002 472 aa4.75□□□□□ -1.65
USP47-211ENST00000531513 CHAF1BQ13112 559 aa4.75□□□□□ -1.65
USP47-211ENST00000531513 BECN1Q14457 450 aa4.75□□□□□ -1.65
USP47-211ENST00000531513 NAA25Q14CX7 972 aa4.75□□□□□ -1.65
USP47-211ENST00000531513 RUNDC3AQ59EK9 446 aa4.75□□□□□ -1.65
USP47-211ENST00000531513 C1QTNF12Q5T7M4 302 aa4.75□□□□□ -1.65
USP47-211ENST00000531513 PXDC1Q5TGL8 231 aa4.75□□□□□ -1.65
USP47-211ENST00000531513 KRT74Q7RTS7 529 aa4.75□□□□□ -1.65
USP47-211ENST00000531513 C8orf58Q8NAV2 365 aa4.75□□□□□ -1.65
USP47-211ENST00000531513 TNIP2Q8NFZ5 429 aa4.75□□□□□ -1.65
USP47-211ENST00000531513 OR52L2PQ8NGH6 319 aa4.75□□□□□ -1.65
USP47-211ENST00000531513 RP9Q8TA86 221 aaKnown RBP4.75□□□□□ -1.65
USP47-211ENST00000531513 GLMPQ8WWB7 406 aa4.75□□□□□ -1.65
USP47-211ENST00000531513 KIF1BPQ96EK5 621 aa4.75□□□□□ -1.65
USP47-211ENST00000531513 PRR11Q96HE9 360 aaPredicted RBP4.75□□□□□ -1.65
USP47-211ENST00000531513 TTC14Q96N46 770 aa4.75□□□□□ -1.65
USP47-211ENST00000531513 MPHOSPH8Q99549 860 aa4.75□□□□□ -1.65
USP47-211ENST00000531513 SLF1Q9BQI6 1058 aa4.75□□□□□ -1.65
USP47-211ENST00000531513 FSD1LQ9BXM9 530 aa4.75□□□□□ -1.65
USP47-211ENST00000531513 SAP30LQ9HAJ7 183 aa4.75□□□□□ -1.65
USP47-211ENST00000531513 ZCCHC17Q9NP64 241 aaKnown RBP4.75□□□□□ -1.65
USP47-211ENST00000531513 SH3GLB2Q9NR46 395 aa4.75□□□□□ -1.65
USP47-211ENST00000531513 THAP1Q9NVV9 213 aa4.75□□□□□ -1.65
USP47-211ENST00000531513 KCND2Q9NZV8 630 aa4.75□□□□□ -1.65
USP47-211ENST00000531513 SARDHQ9UL12 918 aa4.75□□□□□ -1.65
USP47-211ENST00000531513 ZNF215Q9UL58 517 aaPredicted RBP4.75□□□□□ -1.65
USP47-211ENST00000531513 PCDHB2Q9Y5E7 798 aa4.75□□□□□ -1.65
USP47-211ENST00000531513 SNX8Q9Y5X2 465 aa4.75□□□□□ -1.65
USP47-211ENST00000531513 COPG1Q9Y678 874 aaKnown RBP4.75□□□□□ -1.65
USP47-211ENST00000531513 CYP2D7A0A087X1C5 515 aa4.74□□□□□ -1.65
USP47-211ENST00000531513 A0A0U1RQG5 324 aaPredicted RBP4.74□□□□□ -1.65
USP47-211ENST00000531513 C3orf70A6NLC5 250 aaPredicted RBP4.74□□□□□ -1.65
USP47-211ENST00000531513 AGAP14A8MT82 685 aa4.74□□□□□ -1.65
USP47-211ENST00000531513 VILLO15195 856 aa4.74□□□□□ -1.65
USP47-211ENST00000531513 METTL18O95568 372 aa4.74□□□□□ -1.65
USP47-211ENST00000531513 URODP06132 367 aa4.74□□□□□ -1.65
USP47-211ENST00000531513 CSH1P0DML2 217 aa4.74□□□□□ -1.65
USP47-211ENST00000531513 CSH2P0DML3 217 aa4.74□□□□□ -1.65
USP47-211ENST00000531513 TMIGD3P0DMS9 266 aaPredicted RBP4.74□□□□□ -1.65
USP47-211ENST00000531513 COX7A2P14406 83 aa4.74□□□□□ -1.65
USP47-211ENST00000531513 ARSAP15289 507 aa4.74□□□□□ -1.65
USP47-211ENST00000531513 AVPR2P30518 371 aa4.74□□□□□ -1.65
USP47-211ENST00000531513 PLCD1P51178 756 aa4.74□□□□□ -1.65
USP47-211ENST00000531513 MVDP53602 400 aa4.74□□□□□ -1.65
USP47-211ENST00000531513 IFI35P80217 286 aaPredicted RBP4.74□□□□□ -1.65
USP47-211ENST00000531513 MC1RQ01726 317 aa4.74□□□□□ -1.65
USP47-211ENST00000531513 DAZAP2Q15038 168 aaPredicted RBP4.74□□□□□ -1.65
USP47-211ENST00000531513 Q4G0T1 1027 aa4.74□□□□□ -1.65
USP47-211ENST00000531513 DUSP28Q4G0W2 176 aa4.74□□□□□ -1.65
USP47-211ENST00000531513 IKBIPQ70UQ0 350 aa4.74□□□□□ -1.65
USP47-211ENST00000531513 CCDC105Q8IYK2 499 aa4.74□□□□□ -1.65
USP47-211ENST00000531513 SAMD14Q8IZD0 417 aaPredicted RBP4.74□□□□□ -1.65
USP47-211ENST00000531513 NOC3LQ8WTT2 800 aaKnown RBP4.74□□□□□ -1.65
USP47-211ENST00000531513 XAGE5Q8WWM1 108 aa4.74□□□□□ -1.65
USP47-211ENST00000531513 FAM120BQ96EK7 910 aaKnown RBP4.74□□□□□ -1.65
USP47-211ENST00000531513 SAAL1Q96ER3 474 aa4.74□□□□□ -1.65
USP47-211ENST00000531513 CALML4Q96GE6 196 aa4.74□□□□□ -1.65
USP47-211ENST00000531513 CLSTN3Q9BQT9 956 aa4.74□□□□□ -1.65
USP47-211ENST00000531513 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.74□□□□□ -1.65
USP47-211ENST00000531513 CTDSP1Q9GZU7 261 aa4.74□□□□□ -1.65
USP47-211ENST00000531513 TTYH1Q9H313 450 aaPredicted RBP4.74□□□□□ -1.65
USP47-211ENST00000531513 CDCP1Q9H5V8 836 aa4.74□□□□□ -1.65
USP47-211ENST00000531513 PCDHB16Q9NRJ7 776 aa4.74□□□□□ -1.65
USP47-211ENST00000531513 HCFC1R1Q9NWW0 138 aa4.74□□□□□ -1.65
USP47-211ENST00000531513 MTMR4Q9NYA4 1195 aa4.74□□□□□ -1.65
USP47-211ENST00000531513 MGAT4CQ9UBM8 478 aa4.74□□□□□ -1.65
USP47-211ENST00000531513 GIMAP2Q9UG22 337 aa4.74□□□□□ -1.65
USP47-211ENST00000531513 RPS6KA6Q9UK32 745 aa4.74□□□□□ -1.65
USP47-211ENST00000531513 PCDHGB4Q9UN71 923 aa4.74□□□□□ -1.65
USP47-211ENST00000531513 GABRQQ9UN88 632 aa4.74□□□□□ -1.65
USP47-211ENST00000531513 OSGIN2Q9Y236 505 aa4.74□□□□□ -1.65
USP47-211ENST00000531513 TGFB1I1O43294 461 aa4.73□□□□□ -1.65
USP47-211ENST00000531513 DKC1O60832 514 aaKnown RBP eCLIP4.73□□□□□ -1.65
USP47-211ENST00000531513 BCAR3O75815 825 aa4.73□□□□□ -1.65
USP47-211ENST00000531513 ALDOAP04075 364 aaKnown RBP4.73□□□□□ -1.65
USP47-211ENST00000531513 ADRB2P07550 413 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms