RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 RPL10P27635 214 aaKnown RBP8.26□□□□□ -1.09
CSDE1-214ENST00000530886 VAMP7P51809 220 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 RAD23AP54725 363 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 SLC10A2Q12908 348 aaPredicted RBP8.26□□□□□ -1.09
CSDE1-214ENST00000530886 TARDBPQ13148 414 aaKnown RBP eCLIP8.26□□□□□ -1.09
CSDE1-214ENST00000530886 SNX17Q15036 470 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 ZNF181Q2M3W8 571 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 TFDP3Q5H9I0 405 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 ZCCHC8Q6NZY4 707 aaKnown RBP8.26□□□□□ -1.09
CSDE1-214ENST00000530886 ZCCHC23Q6ZST2 131 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 SNX32Q86XE0 403 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 NDUFAF2Q8N183 169 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 OR6Q1Q8NGQ2 317 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 DHX38Q92620 1227 aaKnown RBP8.26□□□□□ -1.09
CSDE1-214ENST00000530886 DDX17Q92841 729 aaKnown RBP8.26□□□□□ -1.09
CSDE1-214ENST00000530886 ZBED2Q9BTP6 218 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 GON7Q9BXV9 100 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 TRPV6Q9H1D0 765 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 EFCAB1Q9HAE3 211 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 WRAP73Q9P2S5 460 aaPredicted RBP8.26□□□□□ -1.09
CSDE1-214ENST00000530886 PNMA6FA0A0J9YX94 578 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 FAM86B1E9PN63 330 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 PLIN3O60664 434 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 ZC3H11AO75152 810 aaKnown RBP eCLIP8.26□□□□□ -1.095e-6■□□□□ 9.7
CSDE1-214ENST00000530886 BCAS1O75363 584 aaPredicted RBP8.26□□□□□ -1.09
CSDE1-214ENST00000530886 TOP3BO95985 862 aaKnown RBP8.26□□□□□ -1.09
CSDE1-214ENST00000530886 EGFRP00533 1210 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 PRKCGP05129 697 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 GSNP06396 782 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 FAM86B2P0C5J1 330 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 CCND2P30279 289 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 CDK8P49336 464 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 PPP5CP53041 499 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 GABPAQ06546 454 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 ZNF252P-AS1Q0IIN9 211 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 FSTL1Q12841 308 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 MMRN1Q13201 1228 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 AQP6Q13520 282 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 KCNJ11Q14654 390 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 ATP6AP1Q15904 470 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 MFSD7Q6UXD7 560 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 FKBP9P1Q75LS8 142 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 BEND7Q8N7W2 519 aaPredicted RBP8.26□□□□□ -1.09
CSDE1-214ENST00000530886 BRSK1Q8TDC3 778 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 SLC7A3Q8WY07 619 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 PBXIP1Q96AQ6 731 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 ASB2Q96Q27 587 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 PSKH2Q96QS6 385 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 MTG1Q9BT17 334 aaPredicted RBP8.26□□□□□ -1.09
CSDE1-214ENST00000530886 MKRN2Q9H000 416 aaKnown RBP8.26□□□□□ -1.09
CSDE1-214ENST00000530886 SEMA6AQ9H2E6 1030 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 COG4Q9H9E3 785 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 VWA7Q9Y334 891 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 AFG3L2Q9Y4W6 797 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 CROCCQ5TZA2 2017 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 TCRBV7S3A2A0A539 114 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 SPDYE2BA6NHP3 402 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 CHADO15335 359 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 PHGDHO43175 533 aaKnown RBP8.26□□□□□ -1.09
CSDE1-214ENST00000530886 AVILO75366 819 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 VAPBO95292 243 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 RASAL1O95294 804 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 SPDYE6P0CI01 402 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 DDX5P17844 614 aaKnown RBP8.26□□□□□ -1.09
CSDE1-214ENST00000530886 IL4RP24394 825 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 GRK3P35626 688 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 CDKN2BP42772 138 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 QARSP47897 775 aaKnown RBP8.26□□□□□ -1.09
CSDE1-214ENST00000530886 CLCNKBP51801 687 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 NKX2-5P52952 324 aaPredicted RBP8.26□□□□□ -1.09
CSDE1-214ENST00000530886 RAD51Q06609 339 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 TAZQ16635 292 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 SPDYE2Q495Y8 402 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 LLGL2Q6P1M3 1020 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 FAM122CQ6P4D5 195 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 FAM171BQ6P995 826 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 B3GNT9Q6UX72 402 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 ENOSF1Q7L5Y1 443 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 LINC00523Q86TU6 105 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 RIOX2Q8IUF8 465 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 ADGRF4Q8IZF3 695 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 MMP19Q99542 508 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 ACO2Q99798 780 aaKnown RBP8.26□□□□□ -1.09
CSDE1-214ENST00000530886 GLT8D2Q9H1C3 349 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 AASDHPPTQ9NRN7 309 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 IP6K2Q9UHH9 426 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 LY75O60449 1722 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 SAGE2PA6NJ88 616 aa8.25□□□□□ -1.09
CSDE1-214ENST00000530886 FAM159BA6NKW6 160 aa8.25□□□□□ -1.09
CSDE1-214ENST00000530886 FAM25AB3EWG3 89 aa8.25□□□□□ -1.09
CSDE1-214ENST00000530886 FAM25CB3EWG5 89 aa8.25□□□□□ -1.09
CSDE1-214ENST00000530886 FAM25GB3EWG6 89 aa8.25□□□□□ -1.09
CSDE1-214ENST00000530886 H0YAE9 185 aa8.25□□□□□ -1.09
CSDE1-214ENST00000530886 CCRL2O00421 344 aa8.25□□□□□ -1.09
CSDE1-214ENST00000530886 MEIS1O00470 390 aa8.25□□□□□ -1.09
CSDE1-214ENST00000530886 TSPAN9O75954 239 aa8.25□□□□□ -1.09
CSDE1-214ENST00000530886 KCNK2O95069 426 aa8.25□□□□□ -1.09
CSDE1-214ENST00000530886 GSTM1P09488 218 aa8.25□□□□□ -1.09
CSDE1-214ENST00000530886 BMP4P12644 408 aa8.25□□□□□ -1.09
CSDE1-214ENST00000530886 TCF4P15884 667 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms