RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 MT-CO1P00395 513 aa12.4□□□□□ -0.42
TRAF3IP2-211ENST00000528599 POLR2EP19388 210 aaKnown RBP12.4□□□□□ -0.42
TRAF3IP2-211ENST00000528599 RBL1P28749 1068 aa12.4□□□□□ -0.42
TRAF3IP2-211ENST00000528599 COILP38432 576 aaPredicted RBP12.4□□□□□ -0.42
TRAF3IP2-211ENST00000528599 GRIA2P42262 883 aa12.4□□□□□ -0.42
TRAF3IP2-211ENST00000528599 NRLP54845 237 aa12.4□□□□□ -0.42
TRAF3IP2-211ENST00000528599 CKAP4Q07065 602 aaKnown RBP12.4□□□□□ -0.42
TRAF3IP2-211ENST00000528599 IL10RBQ08334 325 aa12.4□□□□□ -0.42
TRAF3IP2-211ENST00000528599 C2orf54Q08AI8 447 aa12.4□□□□□ -0.42
TRAF3IP2-211ENST00000528599 PON2Q15165 354 aa12.4□□□□□ -0.42
TRAF3IP2-211ENST00000528599 MLF2Q15773 248 aaPredicted RBP12.4□□□□□ -0.42
TRAF3IP2-211ENST00000528599 KCTD19Q17RG1 926 aaPredicted RBP12.4□□□□□ -0.42
TRAF3IP2-211ENST00000528599 TRIM67Q6ZTA4 783 aa12.4□□□□□ -0.42
TRAF3IP2-211ENST00000528599 TPRG1Q6ZUI0 275 aa12.4□□□□□ -0.42
TRAF3IP2-211ENST00000528599 CDKL3Q8IVW4 592 aaPredicted RBP12.4□□□□□ -0.42
TRAF3IP2-211ENST00000528599 CCDC13Q8IYE1 715 aa12.4□□□□□ -0.42
TRAF3IP2-211ENST00000528599 CEP112Q8N8E3 955 aa12.4□□□□□ -0.42
TRAF3IP2-211ENST00000528599 ACDQ96AP0 544 aa12.4□□□□□ -0.42
TRAF3IP2-211ENST00000528599 TMEM121Q9BTD3 319 aa12.4□□□□□ -0.42
TRAF3IP2-211ENST00000528599 CIPCQ9C0C6 399 aa12.4□□□□□ -0.42
TRAF3IP2-211ENST00000528599 DDX47Q9H0S4 455 aaKnown RBP12.4□□□□□ -0.42
TRAF3IP2-211ENST00000528599 SP110Q9HB58 689 aa12.4□□□□□ -0.42
TRAF3IP2-211ENST00000528599 USP29Q9HBJ7 922 aa12.4□□□□□ -0.42
TRAF3IP2-211ENST00000528599 ELOVL2Q9NXB9 296 aa12.4□□□□□ -0.42
TRAF3IP2-211ENST00000528599 HCN2Q9UL51 889 aa12.4□□□□□ -0.42
TRAF3IP2-211ENST00000528599 CA14Q9ULX7 337 aa12.4□□□□□ -0.42
TRAF3IP2-211ENST00000528599 HPCAL4Q9UM19 191 aa12.4□□□□□ -0.42
TRAF3IP2-211ENST00000528599 ZDBF2Q9HCK1 2354 aa12.4□□□□□ -0.42
TRAF3IP2-211ENST00000528599 KRBA1A5PL33 1030 aa12.39□□□□□ -0.43
TRAF3IP2-211ENST00000528599 KCNK1O00180 336 aa12.39□□□□□ -0.43
TRAF3IP2-211ENST00000528599 MATN3O15232 486 aa12.39□□□□□ -0.43
TRAF3IP2-211ENST00000528599 APODP05090 189 aa12.39□□□□□ -0.43
TRAF3IP2-211ENST00000528599 CD72P21854 359 aa12.39□□□□□ -0.43
TRAF3IP2-211ENST00000528599 STK19P49842 368 aaPredicted RBP12.39□□□□□ -0.43
TRAF3IP2-211ENST00000528599 CLCN6P51797 869 aa12.39□□□□□ -0.43
TRAF3IP2-211ENST00000528599 ECT2LQ008S8 904 aa12.39□□□□□ -0.43
TRAF3IP2-211ENST00000528599 ZNF33AQ06730 810 aa12.39□□□□□ -0.43
TRAF3IP2-211ENST00000528599 SIGLEC14Q08ET2 396 aa12.39□□□□□ -0.43
TRAF3IP2-211ENST00000528599 TMEM196Q5HYL7 178 aa12.39□□□□□ -0.43
TRAF3IP2-211ENST00000528599 FSTL4Q6MZW2 842 aa12.39□□□□□ -0.43
TRAF3IP2-211ENST00000528599 KLHL7Q8IXQ5 586 aa12.39□□□□□ -0.43
TRAF3IP2-211ENST00000528599 UBALD2Q8IYN6 164 aa12.39□□□□□ -0.43
TRAF3IP2-211ENST00000528599 MNS1Q8NEH6 495 aa12.39□□□□□ -0.43
TRAF3IP2-211ENST00000528599 CYB5D2Q8WUJ1 264 aa12.39□□□□□ -0.43
TRAF3IP2-211ENST00000528599 UBXN4Q92575 508 aa12.39□□□□□ -0.43
TRAF3IP2-211ENST00000528599 MAML1Q92585 1016 aa12.39□□□□□ -0.43
TRAF3IP2-211ENST00000528599 FATE1Q969F0 183 aa12.39□□□□□ -0.43
TRAF3IP2-211ENST00000528599 ZNF419Q96HQ0 510 aaPredicted RBP12.39□□□□□ -0.43
TRAF3IP2-211ENST00000528599 RPL10LQ96L21 214 aaKnown RBP12.39□□□□□ -0.43
TRAF3IP2-211ENST00000528599 MRGPRX3Q96LB0 322 aa12.39□□□□□ -0.43
TRAF3IP2-211ENST00000528599 CARD6Q9BX69 1037 aa12.39□□□□□ -0.43
TRAF3IP2-211ENST00000528599 WNT16Q9UBV4 365 aa12.39□□□□□ -0.43
TRAF3IP2-211ENST00000528599 ZNF148Q9UQR1 794 aa12.39□□□□□ -0.43
TRAF3IP2-211ENST00000528599 DRG1Q9Y295 367 aaKnown RBP12.39□□□□□ -0.43
TRAF3IP2-211ENST00000528599 SHROOM3Q8TF72 1996 aa12.39□□□□□ -0.43
TRAF3IP2-211ENST00000528599 F5P12259 2224 aa12.39□□□□□ -0.43
TRAF3IP2-211ENST00000528599 CCDC188H7C350 402 aa12.38□□□□□ -0.43
TRAF3IP2-211ENST00000528599 K7EQS6 105 aa12.38□□□□□ -0.43
TRAF3IP2-211ENST00000528599 K7ERQ8 282 aa12.38□□□□□ -0.43
TRAF3IP2-211ENST00000528599 KCNN4O15554 427 aa12.38□□□□□ -0.43
TRAF3IP2-211ENST00000528599 SMAD6O43541 496 aaKnown RBP12.38□□□□□ -0.43
TRAF3IP2-211ENST00000528599 ITGAVP06756 1048 aa12.38□□□□□ -0.43
TRAF3IP2-211ENST00000528599 CHRNA3P32297 505 aa12.38□□□□□ -0.43
TRAF3IP2-211ENST00000528599 GDF10P55107 478 aa12.38□□□□□ -0.43
TRAF3IP2-211ENST00000528599 SULT2A1Q06520 285 aa12.38□□□□□ -0.43
TRAF3IP2-211ENST00000528599 SLC10A7Q0GE19 358 aa12.38□□□□□ -0.43
TRAF3IP2-211ENST00000528599 WASHC5Q12768 1159 aa12.38□□□□□ -0.43
TRAF3IP2-211ENST00000528599 ZBTB17Q13105 803 aa12.38□□□□□ -0.43
TRAF3IP2-211ENST00000528599 EIF4HQ15056 248 aaKnown RBP12.38□□□□□ -0.43
TRAF3IP2-211ENST00000528599 PTPRNQ16849 979 aa12.38□□□□□ -0.43
TRAF3IP2-211ENST00000528599 PREPLQ4J6C6 727 aaPredicted RBP12.38□□□□□ -0.43
TRAF3IP2-211ENST00000528599 EMC10Q5UCC4 262 aa12.38□□□□□ -0.43
TRAF3IP2-211ENST00000528599 TIGD7Q6NT04 549 aaPredicted RBP12.38□□□□□ -0.43
TRAF3IP2-211ENST00000528599 RETSATQ6NUM9 610 aa12.38□□□□□ -0.43
TRAF3IP2-211ENST00000528599 CCDC137Q6PK04 289 aaKnown RBP12.38□□□□□ -0.43
TRAF3IP2-211ENST00000528599 SUGP1Q8IWZ8 645 aaKnown RBP12.38□□□□□ -0.43
TRAF3IP2-211ENST00000528599 FAM71DQ8N9W8 422 aa12.38□□□□□ -0.43
TRAF3IP2-211ENST00000528599 USP33Q8TEY7 942 aa12.38□□□□□ -0.43
TRAF3IP2-211ENST00000528599 HTR3CQ8WXA8 447 aa12.38□□□□□ -0.43
TRAF3IP2-211ENST00000528599 FAM3CQ92520 227 aa12.38□□□□□ -0.43
TRAF3IP2-211ENST00000528599 MSANTD3Q96H12 275 aa12.38□□□□□ -0.43
TRAF3IP2-211ENST00000528599 CEP41Q9BYV8 373 aa12.38□□□□□ -0.43
TRAF3IP2-211ENST00000528599 ARHGEF3Q9NR81 526 aa12.38□□□□□ -0.43
TRAF3IP2-211ENST00000528599 SEPT10Q9P0V9 454 aa12.38□□□□□ -0.43
TRAF3IP2-211ENST00000528599 UBA2Q9UBT2 640 aaPredicted RBP12.38□□□□□ -0.43
TRAF3IP2-211ENST00000528599 SLCO3A1Q9UIG8 710 aa12.38□□□□□ -0.43
TRAF3IP2-211ENST00000528599 ERVW-1Q9UQF0 538 aa12.38□□□□□ -0.43
TRAF3IP2-211ENST00000528599 ZSCAN5CA6NGD5 496 aaPredicted RBP12.38□□□□□ -0.43
TRAF3IP2-211ENST00000528599 RNF103O00237 685 aa12.38□□□□□ -0.43
TRAF3IP2-211ENST00000528599 TIMM44O43615 452 aa12.38□□□□□ -0.43
TRAF3IP2-211ENST00000528599 EGFP01133 1207 aa12.38□□□□□ -0.43
TRAF3IP2-211ENST00000528599 JCHAINP01591 159 aa12.38□□□□□ -0.43
TRAF3IP2-211ENST00000528599 ASLP04424 464 aa12.38□□□□□ -0.43
TRAF3IP2-211ENST00000528599 ATP5BP06576 529 aaKnown RBP12.38□□□□□ -0.43
TRAF3IP2-211ENST00000528599 DLDP09622 509 aaKnown RBP12.38□□□□□ -0.43
TRAF3IP2-211ENST00000528599 CHRM1P11229 460 aaPredicted RBP12.38□□□□□ -0.43
TRAF3IP2-211ENST00000528599 SRCP12931 536 aa12.38□□□□□ -0.43
TRAF3IP2-211ENST00000528599 CCNB1P14635 433 aa12.38□□□□□ -0.43
TRAF3IP2-211ENST00000528599 PTPN3P26045 913 aa12.38□□□□□ -0.43
TRAF3IP2-211ENST00000528599 TNFRSF4P43489 277 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms