RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 RSPO2Q6UXX9 243 aaPredicted RBP15.03■□□□□ -0
ECHDC1-220ENST00000528402 FAM47EQ6ZV65 393 aa15.03■□□□□ -0
ECHDC1-220ENST00000528402 OTOAQ7RTW8 1153 aa15.03■□□□□ -0
ECHDC1-220ENST00000528402 TAS1R1Q7RTX1 841 aa15.03■□□□□ -0
ECHDC1-220ENST00000528402 CCDC91Q7Z6B0 441 aa15.03■□□□□ -0
ECHDC1-220ENST00000528402 LCA5Q86VQ0 697 aa15.03■□□□□ -0
ECHDC1-220ENST00000528402 TEX26Q8N6G2 289 aa15.03■□□□□ -0
ECHDC1-220ENST00000528402 TTC9BQ8N6N2 239 aa15.03■□□□□ -0
ECHDC1-220ENST00000528402 ZNF461Q8TAF7 563 aa15.03■□□□□ -0
ECHDC1-220ENST00000528402 TSSK1BQ9BXA7 367 aa15.03■□□□□ -0
ECHDC1-220ENST00000528402 TRIM55Q9BYV6 548 aa15.03■□□□□ -0
ECHDC1-220ENST00000528402 MPP6Q9NZW5 540 aa15.03■□□□□ -0
ECHDC1-220ENST00000528402 TBX21Q9UL17 535 aa15.03■□□□□ -0
ECHDC1-220ENST00000528402 SLC12A4Q9UP95 1085 aa15.03■□□□□ -0
ECHDC1-220ENST00000528402 CFAP73A6NFT4 308 aa15.02■□□□□ -0
ECHDC1-220ENST00000528402 ATP9BO43861 1147 aa15.02■□□□□ -0
ECHDC1-220ENST00000528402 UGT1A9O60656 530 aa15.02■□□□□ -0
ECHDC1-220ENST00000528402 ABLIM3O94929 683 aa15.02■□□□□ -0
ECHDC1-220ENST00000528402 ATP5BP06576 529 aaKnown RBP15.02■□□□□ -0
ECHDC1-220ENST00000528402 OR1D2P34982 312 aa15.02■□□□□ -0
ECHDC1-220ENST00000528402 ADRA1AP35348 466 aa15.02■□□□□ -0
ECHDC1-220ENST00000528402 SLC11A2P49281 568 aa15.02■□□□□ -0
ECHDC1-220ENST00000528402 SERPINB8P50452 374 aa15.02■□□□□ -0
ECHDC1-220ENST00000528402 LIMK2P53671 638 aa15.02■□□□□ -0
ECHDC1-220ENST00000528402 ATN1P54259 1190 aaPredicted RBP15.02■□□□□ -0
ECHDC1-220ENST00000528402 FAM182AQ5T1J6 154 aa15.02■□□□□ -0
ECHDC1-220ENST00000528402 CERCAMQ5T4B2 595 aa15.02■□□□□ -0
ECHDC1-220ENST00000528402 TEDDM1Q5T9Z0 273 aa15.02■□□□□ -0
ECHDC1-220ENST00000528402 TMCO4Q5TGY1 634 aa15.02■□□□□ -0
ECHDC1-220ENST00000528402 RANBP10Q6VN20 620 aa15.02■□□□□ -0
ECHDC1-220ENST00000528402 ARHGAP36Q6ZRI8 547 aa15.02■□□□□ -0
ECHDC1-220ENST00000528402 OTOP3Q7RTS5 596 aa15.02■□□□□ -0
ECHDC1-220ENST00000528402 DEFB128Q7Z7B8 93 aa15.02■□□□□ -0
ECHDC1-220ENST00000528402 MIB1Q86YT6 1006 aa15.02■□□□□ -0
ECHDC1-220ENST00000528402 ANKLE1Q8NAG6 615 aa15.02■□□□□ -0
ECHDC1-220ENST00000528402 PPHLN1Q8NEY8 458 aaKnown RBP15.02■□□□□ -0
ECHDC1-220ENST00000528402 USP33Q8TEY7 942 aa15.02■□□□□ -0
ECHDC1-220ENST00000528402 TOP1MTQ969P6 601 aa15.02■□□□□ -0
ECHDC1-220ENST00000528402 PLD4Q96BZ4 506 aa15.02■□□□□ -0
ECHDC1-220ENST00000528402 TRMT2BQ96GJ1 504 aaKnown RBP15.02■□□□□ -0
ECHDC1-220ENST00000528402 B3GALT6Q96L58 329 aa15.02■□□□□ -0
ECHDC1-220ENST00000528402 MYRFLQ96LU7 910 aa15.02■□□□□ -0
ECHDC1-220ENST00000528402 C7orf26Q96N11 449 aa15.02■□□□□ -0
ECHDC1-220ENST00000528402 ZNF558Q96NG5 402 aa15.02■□□□□ -0
ECHDC1-220ENST00000528402 ZNF599Q96NL3 588 aa15.02■□□□□ -0
ECHDC1-220ENST00000528402 FCRL3Q96P31 734 aaPredicted RBP15.02■□□□□ -0
ECHDC1-220ENST00000528402 RBBP8Q99708 897 aa15.02■□□□□ -0
ECHDC1-220ENST00000528402 DDX50Q9BQ39 737 aaKnown RBP15.02■□□□□ -0
ECHDC1-220ENST00000528402 TUBB6Q9BUF5 446 aa15.02■□□□□ -0
ECHDC1-220ENST00000528402 PPP1R12CQ9BZL4 782 aa15.02■□□□□ -0
ECHDC1-220ENST00000528402 SLC13A1Q9BZW2 595 aa15.02■□□□□ -0
ECHDC1-220ENST00000528402 NOL6Q9H6R4 1146 aaKnown RBP15.02■□□□□ -0
ECHDC1-220ENST00000528402 UGT1A7Q9HAW7 530 aa15.02■□□□□ -0
ECHDC1-220ENST00000528402 UGT1A10Q9HAW8 530 aa15.02■□□□□ -0
ECHDC1-220ENST00000528402 UGT1A8Q9HAW9 530 aa15.02■□□□□ -0
ECHDC1-220ENST00000528402 SP110Q9HB58 689 aa15.02■□□□□ -0
ECHDC1-220ENST00000528402 SIRPGQ9P1W8 387 aa15.02■□□□□ -0
ECHDC1-220ENST00000528402 MTO1Q9Y2Z2 717 aaKnown RBP15.02■□□□□ -0
ECHDC1-220ENST00000528402 CAPN7Q9Y6W3 813 aa15.02■□□□□ -0
ECHDC1-220ENST00000528402 ANKRD65E5RJM6 399 aa15.01□□□□□ -0.01
ECHDC1-220ENST00000528402 F5H5T6 163 aa15.01□□□□□ -0.01
ECHDC1-220ENST00000528402 C2CD2LO14523 706 aa15.01□□□□□ -0.01
ECHDC1-220ENST00000528402 ACSL4O60488 711 aa15.01□□□□□ -0.01
ECHDC1-220ENST00000528402 RAMP2O60895 175 aa15.01□□□□□ -0.01
ECHDC1-220ENST00000528402 USP12O75317 370 aa15.01□□□□□ -0.01
ECHDC1-220ENST00000528402 HLA-DQB2P05538 268 aa15.01□□□□□ -0.01
ECHDC1-220ENST00000528402 ERVK-10P10266 1014 aa15.01□□□□□ -0.01
ECHDC1-220ENST00000528402 LAG3P18627 525 aa15.01□□□□□ -0.01
ECHDC1-220ENST00000528402 TACR2P21452 398 aa15.01□□□□□ -0.01
ECHDC1-220ENST00000528402 TYK2P29597 1187 aa15.01□□□□□ -0.01
ECHDC1-220ENST00000528402 PBX3P40426 434 aa15.01□□□□□ -0.01
ECHDC1-220ENST00000528402 MAGEA12P43365 314 aa15.01□□□□□ -0.01
ECHDC1-220ENST00000528402 HARS2P49590 506 aaKnown RBP15.01□□□□□ -0.01
ECHDC1-220ENST00000528402 DSG1Q02413 1049 aa15.01□□□□□ -0.01
ECHDC1-220ENST00000528402 BMPR2Q13873 1038 aa15.01□□□□□ -0.01
ECHDC1-220ENST00000528402 POLD3Q15054 466 aaPredicted RBP15.01□□□□□ -0.01
ECHDC1-220ENST00000528402 CCDC153Q494R4 210 aa15.01□□□□□ -0.01
ECHDC1-220ENST00000528402 TRIM60Q495X7 471 aa15.01□□□□□ -0.01
ECHDC1-220ENST00000528402 HECTD3Q5T447 861 aa15.01□□□□□ -0.01
ECHDC1-220ENST00000528402 PRSS55Q6UWB4 352 aaPredicted RBP15.01□□□□□ -0.01
ECHDC1-220ENST00000528402 NLRP9Q7RTR0 991 aa15.01□□□□□ -0.01
ECHDC1-220ENST00000528402 STRA8Q7Z7C7 330 aa15.01□□□□□ -0.01
ECHDC1-220ENST00000528402 KCNMB4Q86W47 210 aa15.01□□□□□ -0.01
ECHDC1-220ENST00000528402 NUDCD3Q8IVD9 361 aa15.01□□□□□ -0.01
ECHDC1-220ENST00000528402 BBS5Q8N3I7 341 aa15.01□□□□□ -0.01
ECHDC1-220ENST00000528402 GPR152Q8TDT2 470 aa15.01□□□□□ -0.01
ECHDC1-220ENST00000528402 GIPC2Q8TF65 315 aa15.01□□□□□ -0.01
ECHDC1-220ENST00000528402 BCL7CQ8WUZ0 217 aaPredicted RBP15.01□□□□□ -0.01
ECHDC1-220ENST00000528402 E2F7Q96AV8 911 aa15.01□□□□□ -0.01
ECHDC1-220ENST00000528402 ZNF689Q96CS4 500 aaPredicted RBP15.01□□□□□ -0.01
ECHDC1-220ENST00000528402 IMP4Q96G21 291 aaKnown RBP15.01□□□□□ -0.01
ECHDC1-220ENST00000528402 RPRD1AQ96P16 312 aaPredicted RBP15.01□□□□□ -0.01
ECHDC1-220ENST00000528402 RANBP9Q96S59 729 aa15.01□□□□□ -0.01
ECHDC1-220ENST00000528402 SIKE1Q9BRV8 207 aa15.01□□□□□ -0.01
ECHDC1-220ENST00000528402 TRIM56Q9BRZ2 755 aaKnown RBP15.01□□□□□ -0.01
ECHDC1-220ENST00000528402 HERC2P3Q9BVR0 1158 aa15.01□□□□□ -0.01
ECHDC1-220ENST00000528402 FSD1LQ9BXM9 530 aa15.01□□□□□ -0.01
ECHDC1-220ENST00000528402 MAGEH1Q9H213 219 aa15.01□□□□□ -0.01
ECHDC1-220ENST00000528402 CRISPLD1Q9H336 500 aa15.01□□□□□ -0.01
ECHDC1-220ENST00000528402 C20orf96Q9NUD7 363 aaPredicted RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms