RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 SCYL2Q6P3W7 929 aa12.39□□□□□ -0.43
TRAPPC4-209ENST00000528230 FAM72BQ86X60 149 aa12.39□□□□□ -0.43
TRAPPC4-209ENST00000528230 DRC7Q8IY82 874 aa12.39□□□□□ -0.43
TRAPPC4-209ENST00000528230 HDDC3Q8N4P3 179 aa12.39□□□□□ -0.43
TRAPPC4-209ENST00000528230 OR7D4Q8NG98 312 aa12.39□□□□□ -0.43
TRAPPC4-209ENST00000528230 OR2T34Q8NGX1 318 aa12.39□□□□□ -0.43
TRAPPC4-209ENST00000528230 CPLX3Q8WVH0 158 aa12.39□□□□□ -0.43
TRAPPC4-209ENST00000528230 BIRC7Q96CA5 298 aa12.39□□□□□ -0.43
TRAPPC4-209ENST00000528230 SPON2Q9BUD6 331 aa12.39□□□□□ -0.43
TRAPPC4-209ENST00000528230 MAGEB5Q9BZ81 275 aa12.39□□□□□ -0.43
TRAPPC4-209ENST00000528230 XPO4Q9C0E2 1151 aaKnown RBP12.39□□□□□ -0.43
TRAPPC4-209ENST00000528230 CEP44Q9C0F1 390 aa12.39□□□□□ -0.43
TRAPPC4-209ENST00000528230 KDM4CQ9H3R0 1056 aa12.39□□□□□ -0.43
TRAPPC4-209ENST00000528230 TSPY26PQ9H489 355 aa12.39□□□□□ -0.43
TRAPPC4-209ENST00000528230 ATP13A1Q9HD20 1204 aa12.39□□□□□ -0.43
TRAPPC4-209ENST00000528230 DONSONQ9NYP3 566 aa12.39□□□□□ -0.43
TRAPPC4-209ENST00000528230 EIF2B4Q9UI10 523 aaKnown RBP12.39□□□□□ -0.43
TRAPPC4-209ENST00000528230 NEU3Q9UQ49 428 aa12.39□□□□□ -0.43
TRAPPC4-209ENST00000528230 ASCC3Q8N3C0 2202 aaKnown RBP12.39□□□□□ -0.43
TRAPPC4-209ENST00000528230 WASH4PA8MWX3 477 aa12.38□□□□□ -0.43
TRAPPC4-209ENST00000528230 UPK3BL1B0FP48 263 aa12.38□□□□□ -0.43
TRAPPC4-209ENST00000528230 UPK3BL2E5RIL1 263 aa12.38□□□□□ -0.43
TRAPPC4-209ENST00000528230 C1QTNF3-AMACRE9PGA6 284 aa12.38□□□□□ -0.43
TRAPPC4-209ENST00000528230 CBX4O00257 560 aa12.38□□□□□ -0.43
TRAPPC4-209ENST00000528230 SMAD6O43541 496 aaKnown RBP12.38□□□□□ -0.43
TRAPPC4-209ENST00000528230 RNASEH2AO75792 299 aaKnown RBP12.38□□□□□ -0.43
TRAPPC4-209ENST00000528230 RNF8O76064 485 aa12.38□□□□□ -0.43
TRAPPC4-209ENST00000528230 GYPCP04921 128 aa12.38□□□□□ -0.43
TRAPPC4-209ENST00000528230 CSRP1P21291 193 aaKnown RBP12.38□□□□□ -0.43
TRAPPC4-209ENST00000528230 CD27P26842 260 aa12.38□□□□□ -0.43
TRAPPC4-209ENST00000528230 HNRNPH3P31942 346 aaKnown RBP12.38□□□□□ -0.43
TRAPPC4-209ENST00000528230 PSMD8P48556 350 aa12.38□□□□□ -0.43
TRAPPC4-209ENST00000528230 SERPINH1P50454 418 aaKnown RBP12.38□□□□□ -0.43
TRAPPC4-209ENST00000528230 GEMIN4P57678 1058 aaKnown RBP12.38□□□□□ -0.43
TRAPPC4-209ENST00000528230 YBEYP58557 167 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC4-209ENST00000528230 CCDC15Q0P6D6 951 aa12.38□□□□□ -0.43
TRAPPC4-209ENST00000528230 SEMA3BQ13214 749 aa12.38□□□□□ -0.43
TRAPPC4-209ENST00000528230 TDRD12Q587J7 1177 aaKnown RBP12.38□□□□□ -0.43
TRAPPC4-209ENST00000528230 KIAA0895LQ68EN5 471 aa12.38□□□□□ -0.43
TRAPPC4-209ENST00000528230 Q6ZVU0 165 aa12.38□□□□□ -0.43
TRAPPC4-209ENST00000528230 PLPP6Q8IY26 295 aa12.38□□□□□ -0.43
TRAPPC4-209ENST00000528230 AADATQ8N5Z0 425 aa12.38□□□□□ -0.43
TRAPPC4-209ENST00000528230 RTL3Q8N8U3 475 aaKnown RBP12.38□□□□□ -0.43
TRAPPC4-209ENST00000528230 TMIEQ8NEW7 156 aa12.38□□□□□ -0.43
TRAPPC4-209ENST00000528230 OR2A12Q8NGT7 310 aa12.38□□□□□ -0.43
TRAPPC4-209ENST00000528230 ARHGEF2Q92974 986 aaKnown RBP12.38□□□□□ -0.43
TRAPPC4-209ENST00000528230 ZNF653Q96CK0 615 aa12.38□□□□□ -0.43
TRAPPC4-209ENST00000528230 EPAS1Q99814 870 aa12.38□□□□□ -0.43
TRAPPC4-209ENST00000528230 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.38□□□□□ -0.43
TRAPPC4-209ENST00000528230 MIR1-1HGQ9H1L0 117 aa12.38□□□□□ -0.43
TRAPPC4-209ENST00000528230 CATSPERBQ9H7T0 1116 aa12.38□□□□□ -0.43
TRAPPC4-209ENST00000528230 NDFIP2Q9NV92 336 aa12.38□□□□□ -0.43
TRAPPC4-209ENST00000528230 SERGEFQ9UGK8 458 aa12.38□□□□□ -0.43
TRAPPC4-209ENST00000528230 DNAI1Q9UI46 699 aa12.38□□□□□ -0.43
TRAPPC4-209ENST00000528230 HPCAL4Q9UM19 191 aa12.38□□□□□ -0.43
TRAPPC4-209ENST00000528230 K7ERQ8 282 aa12.37□□□□□ -0.43
TRAPPC4-209ENST00000528230 FGF10O15520 208 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC4-209ENST00000528230 ATMINO43313 823 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC4-209ENST00000528230 RAMP2O60895 175 aa12.37□□□□□ -0.43
TRAPPC4-209ENST00000528230 FSBPO95073 299 aa12.37□□□□□ -0.43
TRAPPC4-209ENST00000528230 PRNPP04156 253 aa12.37□□□□□ -0.43
TRAPPC4-209ENST00000528230 IGHV4-34P06331 123 aa12.37□□□□□ -0.43
TRAPPC4-209ENST00000528230 GLDCP23378 1020 aa12.37□□□□□ -0.43
TRAPPC4-209ENST00000528230 EPHB2P29323 1055 aa12.37□□□□□ -0.43
TRAPPC4-209ENST00000528230 CASP14P31944 242 aa12.37□□□□□ -0.43
TRAPPC4-209ENST00000528230 CHRNA3P32297 505 aa12.37□□□□□ -0.43
TRAPPC4-209ENST00000528230 DRD3P35462 400 aa12.37□□□□□ -0.43
TRAPPC4-209ENST00000528230 MAPK8P45983 427 aa12.37□□□□□ -0.43
TRAPPC4-209ENST00000528230 RECQLP46063 649 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC4-209ENST00000528230 CCR5P51681 352 aa12.37□□□□□ -0.43
TRAPPC4-209ENST00000528230 ZNF135P52742 658 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC4-209ENST00000528230 ARF5P84085 180 aa12.37□□□□□ -0.43
TRAPPC4-209ENST00000528230 SLC14A1Q13336 389 aa12.37□□□□□ -0.43
TRAPPC4-209ENST00000528230 TRIM14Q14142 442 aa12.37□□□□□ -0.43
TRAPPC4-209ENST00000528230 POLD3Q15054 466 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC4-209ENST00000528230 PPM1JQ5JR12 505 aa12.37□□□□□ -0.43
TRAPPC4-209ENST00000528230 ERMARDQ5T6L9 678 aa12.37□□□□□ -0.43
TRAPPC4-209ENST00000528230 SPECC1LQ69YQ0 1117 aa12.37□□□□□ -0.43
TRAPPC4-209ENST00000528230 C22orf39Q6P5X5 142 aa12.37□□□□□ -0.43
TRAPPC4-209ENST00000528230 IL27RAQ6UWB1 636 aa12.37□□□□□ -0.43
TRAPPC4-209ENST00000528230 LINGO4Q6UY18 593 aa12.37□□□□□ -0.43
TRAPPC4-209ENST00000528230 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC4-209ENST00000528230 PSTKQ8IV42 348 aaKnown RBP12.37□□□□□ -0.43
TRAPPC4-209ENST00000528230 PYROXD2Q8N2H3 581 aa12.37□□□□□ -0.43
TRAPPC4-209ENST00000528230 ZCCHC9Q8N567 271 aaKnown RBP12.37□□□□□ -0.43
TRAPPC4-209ENST00000528230 PCDH20Q8N6Y1 951 aaKnown RBP12.37□□□□□ -0.43
TRAPPC4-209ENST00000528230 PIP4K2CQ8TBX8 421 aa12.37□□□□□ -0.43
TRAPPC4-209ENST00000528230 ISG20Q96AZ6 181 aaKnown RBP12.37□□□□□ -0.43
TRAPPC4-209ENST00000528230 DNAAF2Q9NVR5 837 aaKnown RBP12.37□□□□□ -0.43
TRAPPC4-209ENST00000528230 SARDHQ9UL12 918 aa12.37□□□□□ -0.43
TRAPPC4-209ENST00000528230 PCNX2A6NKB5 2137 aa12.37□□□□□ -0.43
TRAPPC4-209ENST00000528230 PLXNA2O75051 1894 aa12.36□□□□□ -0.43
TRAPPC4-209ENST00000528230 A0A087X0T9 212 aa12.36□□□□□ -0.43
TRAPPC4-209ENST00000528230 A0A1W2PPC4 97 aa12.36□□□□□ -0.43
TRAPPC4-209ENST00000528230 MED19A0JLT2 244 aaPredicted RBP12.36□□□□□ -0.43
TRAPPC4-209ENST00000528230 ZSCAN5CA6NGD5 496 aaPredicted RBP12.36□□□□□ -0.43
TRAPPC4-209ENST00000528230 KDELR3O43731 214 aa12.36□□□□□ -0.43
TRAPPC4-209ENST00000528230 CREB3O43889 395 aa12.36□□□□□ -0.43
TRAPPC4-209ENST00000528230 OPHN1O60890 802 aa12.36□□□□□ -0.43
TRAPPC4-209ENST00000528230 ZNF821O75541 412 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms