RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 FAM72DQ6L9T8 149 aa33.81■■■■□ 3
SSSCA1-205ENST00000527920 PSAPL1Q6NUJ1 521 aa33.81■■■■□ 3
SSSCA1-205ENST00000527920 NCEH1Q6PIU2 408 aa33.81■■■■□ 3
SSSCA1-205ENST00000527920 IL27RAQ6UWB1 636 aa33.81■■■■□ 3
SSSCA1-205ENST00000527920 PIP4P1Q86T03 277 aa33.81■■■■□ 3
SSSCA1-205ENST00000527920 FAM72BQ86X60 149 aa33.81■■■■□ 3
SSSCA1-205ENST00000527920 ORAI3Q9BRQ5 295 aa33.81■■■■□ 3
SSSCA1-205ENST00000527920 ATP13A1Q9HD20 1204 aa33.81■■■■□ 3
SSSCA1-205ENST00000527920 GRIA4P48058 902 aa33.8■■■■□ 3
SSSCA1-205ENST00000527920 CCR5P51681 352 aa33.8■■■■□ 3
SSSCA1-205ENST00000527920 ADPRHP54922 357 aa33.8■■■■□ 3
SSSCA1-205ENST00000527920 MAMLD1Q13495 774 aa33.8■■■■□ 3
SSSCA1-205ENST00000527920 EFHC2Q5JST6 749 aa33.8■■■■□ 3
SSSCA1-205ENST00000527920 RWDD4Q6NW29 188 aaKnown RBP33.8■■■■□ 3
SSSCA1-205ENST00000527920 DRC7Q8IY82 874 aa33.8■■■■□ 3
SSSCA1-205ENST00000527920 SYN2Q92777 582 aaPredicted RBP33.8■■■■□ 3
SSSCA1-205ENST00000527920 ACE2Q9BYF1 805 aaPredicted RBP33.8■■■■□ 3
SSSCA1-205ENST00000527920 CEP44Q9C0F1 390 aa33.8■■■■□ 3
SSSCA1-205ENST00000527920 KDM4CQ9H3R0 1056 aa33.8■■■■□ 3
SSSCA1-205ENST00000527920 TM9SF3Q9HD45 589 aa33.8■■■■□ 3
SSSCA1-205ENST00000527920 SARDHQ9UL12 918 aa33.8■■■■□ 3
SSSCA1-205ENST00000527920 KCNA4P22459 653 aa33.79■■■■□ 3
SSSCA1-205ENST00000527920 TEAD4Q15561 434 aa33.79■■■■□ 3
SSSCA1-205ENST00000527920 N4BP2L1Q5TBK1 243 aaPredicted RBP33.79■■■■□ 3
SSSCA1-205ENST00000527920 OR2A12Q8NGT7 310 aa33.79■■■■□ 3
SSSCA1-205ENST00000527920 SPON2Q9BUD6 331 aa33.79■■■■□ 3
SSSCA1-205ENST00000527920 SLC32A1Q9H598 525 aa33.79■■■■□ 3
SSSCA1-205ENST00000527920 A0A1W2PPC4 97 aa33.78■■■■□ 3
SSSCA1-205ENST00000527920 K7ERQ8 282 aa33.78■■■■□ 3
SSSCA1-205ENST00000527920 CBX4O00257 560 aa33.78■■■■□ 3
SSSCA1-205ENST00000527920 SERPINH1P50454 418 aaKnown RBP33.78■■■■□ 3
SSSCA1-205ENST00000527920 C22orf39Q6P5X5 142 aa33.78■■■■□ 3
SSSCA1-205ENST00000527920 LINGO4Q6UY18 593 aa33.78■■■■□ 3
SSSCA1-205ENST00000527920 PIP4K2CQ8TBX8 421 aa33.78■■■■□ 3
SSSCA1-205ENST00000527920 MAGEH1Q9H213 219 aa33.78■■■■□ 3
SSSCA1-205ENST00000527920 BZW2Q9Y6E2 419 aaKnown RBP33.78■■■■□ 3
SSSCA1-205ENST00000527920 SLCO1B1Q9Y6L6 691 aa33.78■■■■□ 3
SSSCA1-205ENST00000527920 TMCO5BA8MYB1 307 aa33.77■■■■□ 3
SSSCA1-205ENST00000527920 DDX3XO00571 662 aaKnown RBP eCLIP33.77■■■■□ 3
SSSCA1-205ENST00000527920 SMAD6O43541 496 aaKnown RBP33.77■■■■□ 3
SSSCA1-205ENST00000527920 CER1O95813 267 aa33.77■■■■□ 3
SSSCA1-205ENST00000527920 ZNF883P0CG24 379 aa33.77■■■■□ 3
SSSCA1-205ENST00000527920 GLDCP23378 1020 aa33.77■■■■□ 3
SSSCA1-205ENST00000527920 BNC1Q01954 994 aa33.77■■■■□ 3
SSSCA1-205ENST00000527920 TMC6Q7Z403 805 aa33.77■■■■□ 3
SSSCA1-205ENST00000527920 TMIEQ8NEW7 156 aa33.77■■■■□ 3
SSSCA1-205ENST00000527920 OR2I1PQ8NGU4 316 aa33.77■■■■□ 3
SSSCA1-205ENST00000527920 OR14C36Q8NHC7 312 aa33.77■■■■□ 3
SSSCA1-205ENST00000527920 FZD10Q9ULW2 581 aa33.77■■■■□ 3
SSSCA1-205ENST00000527920 FAM47DPA6NHR8 397 aa33.76■■■□□ 2.99
SSSCA1-205ENST00000527920 RTN2O75298 545 aa33.76■■■□□ 2.99
SSSCA1-205ENST00000527920 FTLP02792 175 aaPredicted RBP33.76■■■□□ 2.99
SSSCA1-205ENST00000527920 CD59P13987 128 aa33.76■■■□□ 2.99
SSSCA1-205ENST00000527920 RACK1P63244 317 aaKnown RBP33.76■■■□□ 2.99
SSSCA1-205ENST00000527920 OGDHQ02218 1023 aa33.76■■■□□ 2.99
SSSCA1-205ENST00000527920 SCYL2Q6P3W7 929 aa33.76■■■□□ 2.99
SSSCA1-205ENST00000527920 FNIP1Q8TF40 1166 aa33.76■■■□□ 2.99
SSSCA1-205ENST00000527920 TRIM11Q96F44 468 aa33.76■■■□□ 2.99
SSSCA1-205ENST00000527920 MAGEB5Q9BZ81 275 aa33.76■■■□□ 2.99
SSSCA1-205ENST00000527920 NDFIP2Q9NV92 336 aa33.76■■■□□ 2.99
SSSCA1-205ENST00000527920 ADAMTS9Q9P2N4 1935 aa33.75■■■□□ 2.99
SSSCA1-205ENST00000527920 PRNPP04156 253 aa33.75■■■□□ 2.99
SSSCA1-205ENST00000527920 MYBL1P10243 752 aa33.75■■■□□ 2.99
SSSCA1-205ENST00000527920 PMLP29590 882 aa33.75■■■□□ 2.99
SSSCA1-205ENST00000527920 CHRNA3P32297 505 aa33.75■■■□□ 2.99
SSSCA1-205ENST00000527920 HTR7P34969 479 aa33.75■■■□□ 2.99
SSSCA1-205ENST00000527920 CSNK1EP49674 416 aaKnown RBP33.75■■■□□ 2.99
SSSCA1-205ENST00000527920 METAP1P53582 386 aa33.75■■■□□ 2.99
SSSCA1-205ENST00000527920 GEMIN4P57678 1058 aaKnown RBP33.75■■■□□ 2.99
SSSCA1-205ENST00000527920 ARF5P84085 180 aa33.75■■■□□ 2.99
SSSCA1-205ENST00000527920 AGBL4Q5VU57 503 aa33.75■■■□□ 2.99
SSSCA1-205ENST00000527920 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP33.75■■■□□ 2.99
SSSCA1-205ENST00000527920 PCDH20Q8N6Y1 951 aaKnown RBP33.75■■■□□ 2.99
SSSCA1-205ENST00000527920 DEFB124Q8NES8 71 aa33.75■■■□□ 2.99
SSSCA1-205ENST00000527920 EPAS1Q99814 870 aa33.75■■■□□ 2.99
SSSCA1-205ENST00000527920 A0A1B0GVT2 93 aa33.74■■■□□ 2.99
SSSCA1-205ENST00000527920 GIPC1O14908 333 aa33.74■■■□□ 2.99
SSSCA1-205ENST00000527920 LATO43561 262 aa33.74■■■□□ 2.99
SSSCA1-205ENST00000527920 PLRG1O43660 514 aaKnown RBP33.74■■■□□ 2.99
SSSCA1-205ENST00000527920 RAMP2O60895 175 aa33.74■■■□□ 2.99
SSSCA1-205ENST00000527920 RECQLP46063 649 aaPredicted RBP33.74■■■□□ 2.99
SSSCA1-205ENST00000527920 ZBED6P86452 979 aa33.74■■■□□ 2.99
SSSCA1-205ENST00000527920 CNTN1Q12860 1018 aa33.74■■■□□ 2.99
SSSCA1-205ENST00000527920 HNRNPDQ14103 355 aaKnown RBP33.74■■■□□ 2.99
SSSCA1-205ENST00000527920 HGSNATQ68CP4 663 aa33.74■■■□□ 2.99
SSSCA1-205ENST00000527920 RTL3Q8N8U3 475 aaKnown RBP33.74■■■□□ 2.99
SSSCA1-205ENST00000527920 ARHGEF2Q92974 986 aaKnown RBP33.74■■■□□ 2.99
SSSCA1-205ENST00000527920 ISG20Q96AZ6 181 aaKnown RBP33.74■■■□□ 2.99
SSSCA1-205ENST00000527920 DNAI1Q9UI46 699 aa33.74■■■□□ 2.99
SSSCA1-205ENST00000527920 CAPN11Q9UMQ6 739 aa33.74■■■□□ 2.99
SSSCA1-205ENST00000527920 SCINQ9Y6U3 715 aa33.74■■■□□ 2.99
SSSCA1-205ENST00000527920 TMEM191CA6NGB0 347 aa33.73■■■□□ 2.99
SSSCA1-205ENST00000527920 EIF3CLB5ME19 914 aaKnown RBP33.73■■■□□ 2.99
SSSCA1-205ENST00000527920 BNIP3LO60238 219 aa33.73■■■□□ 2.99
SSSCA1-205ENST00000527920 ZNF821O75541 412 aaPredicted RBP33.73■■■□□ 2.99
SSSCA1-205ENST00000527920 CTSLP07711 333 aa33.73■■■□□ 2.99
SSSCA1-205ENST00000527920 EPHB2P29323 1055 aa33.73■■■□□ 2.99
SSSCA1-205ENST00000527920 NUDT1P36639 197 aa33.73■■■□□ 2.99
SSSCA1-205ENST00000527920 ACVRL1P37023 503 aa33.73■■■□□ 2.99
SSSCA1-205ENST00000527920 CCDC15Q0P6D6 951 aa33.73■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms