RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 FANCLQ9NW38 375 aa14.54□□□□□ -0.08
CAPN1-212ENST00000527887 LIMA1Q9UHB6 759 aaKnown RBP14.54□□□□□ -0.08
CAPN1-212ENST00000527887 VPS51Q9UID3 782 aa14.54□□□□□ -0.08
CAPN1-212ENST00000527887 SARDHQ9UL12 918 aa14.54□□□□□ -0.08
CAPN1-212ENST00000527887 ZFHX4Q86UP3 3567 aa14.53□□□□□ -0.08
CAPN1-212ENST00000527887 ADAMTS9Q9P2N4 1935 aa14.53□□□□□ -0.08
CAPN1-212ENST00000527887 TLR4O00206 839 aa14.53□□□□□ -0.08
CAPN1-212ENST00000527887 CDK4P11802 303 aa14.53□□□□□ -0.08
CAPN1-212ENST00000527887 SDC4P31431 198 aa14.53□□□□□ -0.08
CAPN1-212ENST00000527887 CHRNA3P32297 505 aa14.53□□□□□ -0.08
CAPN1-212ENST00000527887 RECQLP46063 649 aaPredicted RBP14.53□□□□□ -0.08
CAPN1-212ENST00000527887 RXRGP48443 463 aa14.53□□□□□ -0.08
CAPN1-212ENST00000527887 ARRB1P49407 418 aaPredicted RBP14.53□□□□□ -0.08
CAPN1-212ENST00000527887 GSCP56915 257 aaPredicted RBP14.53□□□□□ -0.08
CAPN1-212ENST00000527887 FMO1Q01740 532 aa14.53□□□□□ -0.08
CAPN1-212ENST00000527887 MYL5Q02045 173 aa14.53□□□□□ -0.08
CAPN1-212ENST00000527887 KCNT1Q5JUK3 1230 aa14.53□□□□□ -0.08
CAPN1-212ENST00000527887 CCNI2Q6ZMN8 369 aaPredicted RBP14.53□□□□□ -0.08
CAPN1-212ENST00000527887 Q6ZVU0 165 aa14.53□□□□□ -0.08
CAPN1-212ENST00000527887 STRADAQ7RTN6 431 aa14.53□□□□□ -0.08
CAPN1-212ENST00000527887 SLCO6A1Q86UG4 719 aa14.53□□□□□ -0.08
CAPN1-212ENST00000527887 GALNT15Q8N3T1 639 aa14.53□□□□□ -0.08
CAPN1-212ENST00000527887 OR2A12Q8NGT7 310 aa14.53□□□□□ -0.08
CAPN1-212ENST00000527887 CFAP57Q96MR6 1250 aa14.53□□□□□ -0.08
CAPN1-212ENST00000527887 CEP44Q9C0F1 390 aa14.53□□□□□ -0.08
CAPN1-212ENST00000527887 OSBPL2Q9H1P3 480 aa14.53□□□□□ -0.08
CAPN1-212ENST00000527887 DYRK4Q9NR20 520 aa14.53□□□□□ -0.08
CAPN1-212ENST00000527887 ARHGAP20Q9P2F6 1191 aa14.53□□□□□ -0.08
CAPN1-212ENST00000527887 SIK3Q9Y2K2 1263 aa14.53□□□□□ -0.08
CAPN1-212ENST00000527887 IGF2RP11717 2491 aa14.53□□□□□ -0.08
CAPN1-212ENST00000527887 CFAP47Q6ZTR5 3102 aa14.52□□□□□ -0.08
CAPN1-212ENST00000527887 LGALS16A8MUM7 142 aa14.52□□□□□ -0.09
CAPN1-212ENST00000527887 PRAMEF26H0Y7S4 382 aa14.52□□□□□ -0.09
CAPN1-212ENST00000527887 KCNK3O14649 394 aa14.52□□□□□ -0.09
CAPN1-212ENST00000527887 SRGAP2O75044 1071 aa14.52□□□□□ -0.09
CAPN1-212ENST00000527887 MT-CO1P00395 513 aa14.52□□□□□ -0.09
CAPN1-212ENST00000527887 WNT1P04628 370 aa14.52□□□□□ -0.09
CAPN1-212ENST00000527887 CCDC172P0C7W6 258 aa14.52□□□□□ -0.09
CAPN1-212ENST00000527887 UNGP13051 313 aaPredicted RBP14.52□□□□□ -0.09
CAPN1-212ENST00000527887 ADRA1BP35368 520 aa14.52□□□□□ -0.09
CAPN1-212ENST00000527887 PTPN9P43378 593 aa14.52□□□□□ -0.09
CAPN1-212ENST00000527887 NSFP46459 744 aaKnown RBP14.52□□□□□ -0.09
CAPN1-212ENST00000527887 COPB1P53618 953 aaKnown RBP14.52□□□□□ -0.09
CAPN1-212ENST00000527887 NXPH1P58417 271 aa14.52□□□□□ -0.09
CAPN1-212ENST00000527887 CNTN1Q12860 1018 aa14.52□□□□□ -0.09
CAPN1-212ENST00000527887 STAT4Q14765 748 aa14.52□□□□□ -0.09
CAPN1-212ENST00000527887 NUMA1Q14980 2115 aa14.52□□□□□ -0.09
CAPN1-212ENST00000527887 SETMARQ53H47 684 aaPredicted RBP14.52□□□□□ -0.09
CAPN1-212ENST00000527887 C2CD6Q53TS8 623 aa14.52□□□□□ -0.09
CAPN1-212ENST00000527887 AGBL4Q5VU57 503 aa14.52□□□□□ -0.09
CAPN1-212ENST00000527887 TRNP1Q6NT89 227 aa14.52□□□□□ -0.09
CAPN1-212ENST00000527887 TMPRSS7Q7RTY8 843 aa14.52□□□□□ -0.09
CAPN1-212ENST00000527887 FAM131BQ86XD5 332 aa14.52□□□□□ -0.09
CAPN1-212ENST00000527887 PLPP6Q8IY26 295 aa14.52□□□□□ -0.09
CAPN1-212ENST00000527887 NEK11Q8NG66 645 aa14.52□□□□□ -0.09
CAPN1-212ENST00000527887 RXFP2Q8WXD0 754 aa14.52□□□□□ -0.09
CAPN1-212ENST00000527887 PPP1R16AQ96I34 528 aa14.52□□□□□ -0.09
CAPN1-212ENST00000527887 HDAC8Q9BY41 377 aa14.52□□□□□ -0.09
CAPN1-212ENST00000527887 RBSNQ9H1K0 784 aa14.52□□□□□ -0.09
CAPN1-212ENST00000527887 NLRC4Q9NPP4 1024 aa14.52□□□□□ -0.09
CAPN1-212ENST00000527887 METTL5Q9NRN9 209 aaKnown RBP14.52□□□□□ -0.09
CAPN1-212ENST00000527887 TOR4AQ9NXH8 423 aa14.52□□□□□ -0.09
CAPN1-212ENST00000527887 MPP6Q9NZW5 540 aa14.52□□□□□ -0.09
CAPN1-212ENST00000527887 ZNF212Q9UDV6 495 aa14.52□□□□□ -0.09
CAPN1-212ENST00000527887 OR12D3Q9UGF7 316 aa14.52□□□□□ -0.09
CAPN1-212ENST00000527887 DMXL2Q8TDJ6 3036 aa14.51□□□□□ -0.09
CAPN1-212ENST00000527887 KNL1Q8NG31 2342 aa14.51□□□□□ -0.09
CAPN1-212ENST00000527887 A0A0D9SEW6 157 aa14.51□□□□□ -0.09
CAPN1-212ENST00000527887 C2CD4BA6NLJ0 364 aa14.51□□□□□ -0.09
CAPN1-212ENST00000527887 SNAP91O60641 907 aa14.51□□□□□ -0.09
CAPN1-212ENST00000527887 RTN2O75298 545 aa14.51□□□□□ -0.09
CAPN1-212ENST00000527887 CALB1P05937 261 aa14.51□□□□□ -0.09
CAPN1-212ENST00000527887 ITGAVP06756 1048 aa14.51□□□□□ -0.09
CAPN1-212ENST00000527887 KRT3P12035 628 aa14.51□□□□□ -0.09
CAPN1-212ENST00000527887 CHRNB2P17787 502 aa14.51□□□□□ -0.09
CAPN1-212ENST00000527887 CDK11BP21127 795 aaKnown RBP14.51□□□□□ -0.09
CAPN1-212ENST00000527887 MAPKAPK2P49137 400 aa14.51□□□□□ -0.09
CAPN1-212ENST00000527887 GEMIN4P57678 1058 aaKnown RBP14.51□□□□□ -0.09
CAPN1-212ENST00000527887 ATP11AP98196 1134 aa14.51□□□□□ -0.09
CAPN1-212ENST00000527887 GNA12Q03113 381 aa14.51□□□□□ -0.09
CAPN1-212ENST00000527887 SYCP1Q15431 976 aa14.51□□□□□ -0.09
CAPN1-212ENST00000527887 CCDC14Q49A88 953 aa14.51□□□□□ -0.09
CAPN1-212ENST00000527887 ARTNQ5T4W7 220 aa14.51□□□□□ -0.09
CAPN1-212ENST00000527887 LAYNQ6UX15 382 aa14.51□□□□□ -0.09
CAPN1-212ENST00000527887 TFAP2DQ7Z6R9 452 aa14.51□□□□□ -0.09
CAPN1-212ENST00000527887 ZSCAN30Q86W11 494 aa14.51□□□□□ -0.09
CAPN1-212ENST00000527887 PCDH20Q8N6Y1 951 aaKnown RBP14.51□□□□□ -0.09
CAPN1-212ENST00000527887 PNPLA1Q8N8W4 532 aa14.51□□□□□ -0.09
CAPN1-212ENST00000527887 FAM174AQ8TBP5 190 aa14.51□□□□□ -0.09
CAPN1-212ENST00000527887 SLC20A1Q8WUM9 679 aa14.51□□□□□ -0.09
CAPN1-212ENST00000527887 ZCCHC14Q8WYQ9 949 aaKnown RBP14.51□□□□□ -0.09
CAPN1-212ENST00000527887 CENPIQ92674 756 aaPredicted RBP14.51□□□□□ -0.09
CAPN1-212ENST00000527887 PCMTD1Q96MG8 357 aaPredicted RBP14.51□□□□□ -0.09
CAPN1-212ENST00000527887 ERGIC2Q96RQ1 377 aa14.51□□□□□ -0.09
CAPN1-212ENST00000527887 SPON2Q9BUD6 331 aa14.51□□□□□ -0.09
CAPN1-212ENST00000527887 ADAM22Q9P0K1 906 aa14.51□□□□□ -0.09
CAPN1-212ENST00000527887 FTSJ1Q9UET6 329 aa14.51□□□□□ -0.09
CAPN1-212ENST00000527887 BTBD3Q9Y2F9 522 aa14.51□□□□□ -0.09
CAPN1-212ENST00000527887 PCDHGA1Q9Y5H4 931 aa14.51□□□□□ -0.09
CAPN1-212ENST00000527887 SNX10Q9Y5X0 201 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms