RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 WASH4PA8MWX3 477 aa15.61■□□□□ 0.09
USH1C-207ENST00000527720 EOMESO95936 686 aa15.61■□□□□ 0.09
USH1C-207ENST00000527720 ITGB1P05556 798 aa15.61■□□□□ 0.09
USH1C-207ENST00000527720 C2P06681 752 aa15.61■□□□□ 0.09
USH1C-207ENST00000527720 NMBRP28336 390 aa15.61■□□□□ 0.09
USH1C-207ENST00000527720 PGM1P36871 562 aa15.61■□□□□ 0.09
USH1C-207ENST00000527720 ALDH18A1P54886 795 aaKnown RBP15.61■□□□□ 0.09
USH1C-207ENST00000527720 AFMIDQ63HM1 303 aa15.61■□□□□ 0.09
USH1C-207ENST00000527720 PKN3Q6P5Z2 889 aa15.61■□□□□ 0.09
USH1C-207ENST00000527720 POTEHQ6S545 545 aa15.61■□□□□ 0.09
USH1C-207ENST00000527720 SCD5Q86SK9 330 aa15.61■□□□□ 0.09
USH1C-207ENST00000527720 CNTN4Q8IWV2 1026 aa15.61■□□□□ 0.09
USH1C-207ENST00000527720 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.61■□□□□ 0.09
USH1C-207ENST00000527720 TTC8Q8TAM2 541 aa15.61■□□□□ 0.09
USH1C-207ENST00000527720 CASP10Q92851 521 aa15.61■□□□□ 0.09
USH1C-207ENST00000527720 FCRL2Q96LA5 508 aaPredicted RBP15.61■□□□□ 0.09
USH1C-207ENST00000527720 C1orf74Q96LT6 269 aa15.61■□□□□ 0.09
USH1C-207ENST00000527720 PGLYRP2Q96PD5 576 aa15.61■□□□□ 0.09
USH1C-207ENST00000527720 RHOJQ9H4E5 214 aa15.61■□□□□ 0.09
USH1C-207ENST00000527720 ENTPD7Q9NQZ7 604 aa15.61■□□□□ 0.09
USH1C-207ENST00000527720 NOD1Q9Y239 953 aa15.61■□□□□ 0.09
USH1C-207ENST00000527720 CDY1Q9Y6F8 540 aa15.61■□□□□ 0.09
USH1C-207ENST00000527720 KCNU1A8MYU2 1149 aa15.61■□□□□ 0.09
USH1C-207ENST00000527720 TMEM189-UBE2V1I3L0A0 370 aa15.61■□□□□ 0.09
USH1C-207ENST00000527720 TPH1P17752 444 aa15.61■□□□□ 0.09
USH1C-207ENST00000527720 IBSPP21815 317 aaPredicted RBP15.61■□□□□ 0.09
USH1C-207ENST00000527720 YY1P25490 414 aa15.61■□□□□ 0.09
USH1C-207ENST00000527720 GCKP35557 465 aa15.61■□□□□ 0.09
USH1C-207ENST00000527720 PRKAA2P54646 552 aa15.61■□□□□ 0.09
USH1C-207ENST00000527720 ITGA9Q13797 1035 aa15.61■□□□□ 0.09
USH1C-207ENST00000527720 RABGAP1LQ5R372 815 aa15.61■□□□□ 0.09
USH1C-207ENST00000527720 ARTNQ5T4W7 220 aa15.61■□□□□ 0.09
USH1C-207ENST00000527720 DCP1BQ8IZD4 617 aaKnown RBP15.61■□□□□ 0.09
USH1C-207ENST00000527720 PLD6Q8N2A8 252 aaKnown RBP15.61■□□□□ 0.09
USH1C-207ENST00000527720 RTL3Q8N8U3 475 aaKnown RBP15.61■□□□□ 0.09
USH1C-207ENST00000527720 FUBP3Q96I24 572 aaKnown RBP eCLIP15.61■□□□□ 0.09
USH1C-207ENST00000527720 ARHGAP39Q9C0H5 1083 aa15.61■□□□□ 0.09
USH1C-207ENST00000527720 SLC39A8Q9C0K1 460 aa15.61■□□□□ 0.09
USH1C-207ENST00000527720 NMRAL1Q9HBL8 299 aa15.61■□□□□ 0.09
USH1C-207ENST00000527720 RGS18Q9NS28 235 aa15.61■□□□□ 0.09
USH1C-207ENST00000527720 UBP1Q9NZI7 540 aa15.61■□□□□ 0.09
USH1C-207ENST00000527720 G3V2L1 256 aa15.6■□□□□ 0.09
USH1C-207ENST00000527720 CABYRO75952 493 aa15.6■□□□□ 0.09
USH1C-207ENST00000527720 SMAD1Q15797 465 aaKnown RBP15.6■□□□□ 0.09
USH1C-207ENST00000527720 CMPK2Q5EBM0 449 aa15.6■□□□□ 0.09
USH1C-207ENST00000527720 ARHGAP36Q6ZRI8 547 aa15.6■□□□□ 0.09
USH1C-207ENST00000527720 ZC3HC1Q86WB0 502 aaKnown RBP15.6■□□□□ 0.09
USH1C-207ENST00000527720 RBM15BQ8NDT2 890 aaKnown RBP15.6■□□□□ 0.09
USH1C-207ENST00000527720 PPHLN1Q8NEY8 458 aaKnown RBP15.6■□□□□ 0.09
USH1C-207ENST00000527720 USP33Q8TEY7 942 aa15.6■□□□□ 0.09
USH1C-207ENST00000527720 AZIN2Q96A70 460 aa15.6■□□□□ 0.09
USH1C-207ENST00000527720 ATXN7L3BQ96GX2 97 aa15.6■□□□□ 0.09
USH1C-207ENST00000527720 ZCWPW1Q9H0M4 648 aa15.6■□□□□ 0.09
USH1C-207ENST00000527720 ZNF358Q9NW07 568 aa15.6■□□□□ 0.09
USH1C-207ENST00000527720 STOML1Q9UBI4 398 aa15.6■□□□□ 0.09
USH1C-207ENST00000527720 SFMBT1Q9UHJ3 866 aa15.6■□□□□ 0.09
USH1C-207ENST00000527720 LRRC42Q9Y546 428 aa15.6■□□□□ 0.09
USH1C-207ENST00000527720 DNAH12Q6ZR08 3092 aa15.6■□□□□ 0.09
USH1C-207ENST00000527720 PRR5-ARHGAP8B1AHC4 643 aa15.6■□□□□ 0.09
USH1C-207ENST00000527720 F8W8V4 182 aa15.6■□□□□ 0.09
USH1C-207ENST00000527720 TRIM13O60858 407 aa15.6■□□□□ 0.09
USH1C-207ENST00000527720 OAZ2O95190 189 aa15.6■□□□□ 0.09
USH1C-207ENST00000527720 SLC2A3P11169 496 aa15.6■□□□□ 0.09
USH1C-207ENST00000527720 COL6A2P12110 1019 aa15.6■□□□□ 0.09
USH1C-207ENST00000527720 ADRA1AP35348 466 aa15.6■□□□□ 0.09
USH1C-207ENST00000527720 ARHGAP8P85298 464 aa15.6■□□□□ 0.09
USH1C-207ENST00000527720 TRIM32Q13049 653 aa15.6■□□□□ 0.09
USH1C-207ENST00000527720 ITGA7Q13683 1181 aa15.6■□□□□ 0.09
USH1C-207ENST00000527720 RCN2Q14257 317 aa15.6■□□□□ 0.09
USH1C-207ENST00000527720 KHDC1Q4VXA5 237 aaKnown RBP15.6■□□□□ 0.09
USH1C-207ENST00000527720 MSANTD2Q6P1R3 559 aa15.6■□□□□ 0.09
USH1C-207ENST00000527720 GLB1LQ6UWU2 654 aa15.6■□□□□ 0.09
USH1C-207ENST00000527720 MON1AQ86VX9 555 aa15.6■□□□□ 0.09
USH1C-207ENST00000527720 ARHGAP18Q8N392 663 aa15.6■□□□□ 0.09
USH1C-207ENST00000527720 N4BP2L2Q92802 583 aaPredicted RBP15.6■□□□□ 0.09
USH1C-207ENST00000527720 FATE1Q969F0 183 aa15.6■□□□□ 0.09
USH1C-207ENST00000527720 DONSONQ9NYP3 566 aa15.6■□□□□ 0.09
USH1C-207ENST00000527720 TLK1Q9UKI8 766 aa15.6■□□□□ 0.09
USH1C-207ENST00000527720 PLA2G4CQ9UP65 541 aa15.6■□□□□ 0.09
USH1C-207ENST00000527720 SCML2Q9UQR0 700 aa15.6■□□□□ 0.09
USH1C-207ENST00000527720 THSD7BQ9C0I4 1608 aa15.59■□□□□ 0.09
USH1C-207ENST00000527720 E9PAM4 449 aa15.59■□□□□ 0.09
USH1C-207ENST00000527720 ZNF195O14628 629 aa15.59■□□□□ 0.09
USH1C-207ENST00000527720 SIN3BO75182 1162 aa15.59■□□□□ 0.09
USH1C-207ENST00000527720 TM7SF2O76062 418 aa15.59■□□□□ 0.09
USH1C-207ENST00000527720 RPSAP08865 295 aaKnown RBP15.59■□□□□ 0.09
USH1C-207ENST00000527720 IDH3AP50213 366 aa15.59■□□□□ 0.09
USH1C-207ENST00000527720 TUBP50607 506 aa15.59■□□□□ 0.09
USH1C-207ENST00000527720 HK2P52789 917 aa15.59■□□□□ 0.09
USH1C-207ENST00000527720 DSC1Q08554 894 aa15.59■□□□□ 0.09
USH1C-207ENST00000527720 KPNB1Q14974 876 aaKnown RBP15.59■□□□□ 0.09
USH1C-207ENST00000527720 NFE2Q16621 373 aaPredicted RBP15.59■□□□□ 0.09
USH1C-207ENST00000527720 ACSBG2Q5FVE4 666 aa15.59■□□□□ 0.09
USH1C-207ENST00000527720 DENND5AQ6IQ26 1287 aa15.59■□□□□ 0.09
USH1C-207ENST00000527720 NET1Q7Z628 596 aaPredicted RBP15.59■□□□□ 0.09
USH1C-207ENST00000527720 MAB21L3Q8N8X9 362 aa15.59■□□□□ 0.09
USH1C-207ENST00000527720 SPATA22Q8NHS9 363 aa15.59■□□□□ 0.09
USH1C-207ENST00000527720 TSNARE1Q96NA8 513 aa15.59■□□□□ 0.09
USH1C-207ENST00000527720 FBXO44Q9H4M3 255 aa15.59■□□□□ 0.09
USH1C-207ENST00000527720 NMRK2Q9NPI5 230 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms